RNA–Protein interactions for RNA: ENST00000565975.5

SPNS1-207, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-207ENST00000565975 EFCAB5A4FU69 1503 aa33.25■■■□□ 2.91
SPNS1-207ENST00000565975 CCNB3Q8WWL7 1395 aa33.25■■■□□ 2.91
SPNS1-207ENST00000565975 DIEXFQ68CQ4 756 aaKnown RBP33.25■■■□□ 2.91
SPNS1-207ENST00000565975 ZNF316A6NFI3 1004 aaPredicted RBP33.21■■■□□ 2.91
SPNS1-207ENST00000565975 ABCA5Q8WWZ7 1642 aa33.19■■■□□ 2.9
SPNS1-207ENST00000565975 CTTNBP2Q8WZ74 1663 aa33.18■■■□□ 2.9
SPNS1-207ENST00000565975 CFAP43Q8NDM7 1665 aa33.17■■■□□ 2.9
SPNS1-207ENST00000565975 LRRC9Q6ZRR7 1453 aa33.16■■■□□ 2.9
SPNS1-207ENST00000565975 DHX57Q6P158 1386 aaKnown RBP33.14■■■□□ 2.9
SPNS1-207ENST00000565975 PCF11O94913 1555 aaKnown RBP33.13■■■□□ 2.89
SPNS1-207ENST00000565975 AQRO60306 1485 aaKnown RBP eCLIP33.12■■■□□ 2.89
SPNS1-207ENST00000565975 FYCO1Q9BQS8 1478 aa33.09■■■□□ 2.89
SPNS1-207ENST00000565975 MRC2Q9UBG0 1479 aa33.09■■■□□ 2.89
SPNS1-207ENST00000565975 GAPVD1Q14C86 1478 aa33.06■■■□□ 2.88
SPNS1-207ENST00000565975 CASKIN1Q8WXD9 1431 aa33.04■■■□□ 2.88
SPNS1-207ENST00000565975 FHOD3Q2V2M9 1422 aa33.03■■■□□ 2.88
SPNS1-207ENST00000565975 WDR62O43379 1518 aa33■■■□□ 2.87
SPNS1-207ENST00000565975 TDRD9Q8NDG6 1382 aaKnown RBP32.99■■■□□ 2.87
SPNS1-207ENST00000565975 TARBP1Q13395 1621 aaKnown RBP32.97■■■□□ 2.87
SPNS1-207ENST00000565975 FMN1Q68DA7 1419 aa32.96■■■□□ 2.87
SPNS1-207ENST00000565975 P3H3Q8IVL6 736 aa32.94■■■□□ 2.86
SPNS1-207ENST00000565975 SAMD9Q5K651 1589 aa32.93■■■□□ 2.86
SPNS1-207ENST00000565975 PHLDB1Q86UU1 1377 aa32.93■■■□□ 2.86
SPNS1-207ENST00000565975 SNAPC4Q5SXM2 1469 aa32.86■■■□□ 2.85
SPNS1-207ENST00000565975 DNAJC5Q9H3Z4 198 aa32.83■■■□□ 2.85
SPNS1-207ENST00000565975 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.83■■■□□ 2.85
SPNS1-207ENST00000565975 RAB3GAP2Q9H2M9 1393 aa32.8■■■□□ 2.84
SPNS1-207ENST00000565975 SETD5Q9C0A6 1442 aa32.79■■■□□ 2.84
SPNS1-207ENST00000565975 ITGAEP38570 1179 aa32.77■■■□□ 2.84
SPNS1-207ENST00000565975 PBRM1Q86U86 1689 aa32.77■■■□□ 2.84
SPNS1-207ENST00000565975 ATP1B4Q9UN42 357 aaPredicted RBP32.76■■■□□ 2.84
SPNS1-207ENST00000565975 SCAF1Q9H7N4 1312 aaKnown RBP32.74■■■□□ 2.83
SPNS1-207ENST00000565975 ACIN1Q9UKV3 1341 aaKnown RBP32.74■■■□□ 2.83
SPNS1-207ENST00000565975 GRIN2BQ13224 1484 aa32.71■■■□□ 2.83
SPNS1-207ENST00000565975 CENPBP07199 599 aaPredicted RBP32.7■■■□□ 2.82
SPNS1-207ENST00000565975 ADAMTS12P58397 1594 aa32.67■■■□□ 2.82
SPNS1-207ENST00000565975 FAM50AQ14320 339 aaKnown RBP32.67■■■□□ 2.82
SPNS1-207ENST00000565975 MAPKBP1O60336 1514 aa32.65■■■□□ 2.82
SPNS1-207ENST00000565975 FGD6Q6ZV73 1430 aa32.62■■■□□ 2.81
SPNS1-207ENST00000565975 LRRIQ1Q96JM4 1722 aa32.61■■■□□ 2.81
SPNS1-207ENST00000565975 MTUS2Q5JR59 1369 aa32.61■■■□□ 2.81
SPNS1-207ENST00000565975 IFT140Q96RY7 1462 aa32.59■■■□□ 2.81
SPNS1-207ENST00000565975 NEUROD1Q13562 356 aa32.59■■■□□ 2.81
SPNS1-207ENST00000565975 IQGAP2Q13576 1575 aa32.58■■■□□ 2.81
SPNS1-207ENST00000565975 EHBP1L1Q8N3D4 1523 aa32.57■■■□□ 2.8
SPNS1-207ENST00000565975 CCDC18Q5T9S5 1454 aa32.54■■■□□ 2.8
SPNS1-207ENST00000565975 MIER1Q8N108 512 aa32.52■■■□□ 2.8
SPNS1-207ENST00000565975 SUPT6HQ7KZ85 1726 aaKnown RBP32.51■■■□□ 2.8
SPNS1-207ENST00000565975 NCOA2Q15596 1464 aa32.5■■■□□ 2.79
SPNS1-207ENST00000565975 HECW1Q76N89 1606 aa32.48■■■□□ 2.79
SPNS1-207ENST00000565975 MYOM3Q5VTT5 1437 aa32.47■■■□□ 2.79
SPNS1-207ENST00000565975 ARHGEF11O15085 1522 aa32.45■■■□□ 2.79
SPNS1-207ENST00000565975 UGGT2Q9NYU1 1516 aa32.45■■■□□ 2.79
SPNS1-207ENST00000565975 ZNF608Q9ULD9 1512 aaPredicted RBP32.4■■■□□ 2.78
SPNS1-207ENST00000565975 TIMELESSQ9UNS1 1208 aa32.39■■■□□ 2.78
SPNS1-207ENST00000565975 HFM1A2PYH4 1435 aa32.37■■■□□ 2.77
SPNS1-207ENST00000565975 MAGI3Q5TCQ9 1506 aa32.36■■■□□ 2.77
SPNS1-207ENST00000565975 EPRSP07814 1512 aaKnown RBP32.33■■■□□ 2.77
SPNS1-207ENST00000565975 KIAA0586Q9BVV6 1533 aa32.33■■■□□ 2.77
SPNS1-207ENST00000565975 PTPN23Q9H3S7 1636 aa32.32■■■□□ 2.76
SPNS1-207ENST00000565975 PTPRKQ15262 1439 aa32.31■■■□□ 2.76
SPNS1-207ENST00000565975 TCOF1Q13428 1488 aaKnown RBP32.3■■■□□ 2.76
SPNS1-207ENST00000565975 EIF4G3O43432 1585 aaKnown RBP32.28■■■□□ 2.76
SPNS1-207ENST00000565975 GRIN2AQ12879 1464 aa32.24■■■□□ 2.75
SPNS1-207ENST00000565975 UACAQ9BZF9 1416 aa32.24■■■□□ 2.75
SPNS1-207ENST00000565975 KIAA0556O60303 1618 aa32.24■■■□□ 2.75
SPNS1-207ENST00000565975 NAIPQ13075 1403 aa32.23■■■□□ 2.75
SPNS1-207ENST00000565975 SIN3AQ96ST3 1273 aa32.21■■■□□ 2.75
SPNS1-207ENST00000565975 DISP1Q96F81 1524 aa32.21■■■□□ 2.75
SPNS1-207ENST00000565975 GTF3C3Q9Y5Q9 886 aa32.2■■■□□ 2.75
SPNS1-207ENST00000565975 MIA2Q96PC5 1412 aa32.2■■■□□ 2.74
SPNS1-207ENST00000565975 MAGI1Q96QZ7 1491 aaPredicted RBP32.19■■■□□ 2.74
SPNS1-207ENST00000565975 CDK13Q14004 1512 aaKnown RBP32.18■■■□□ 2.74
SPNS1-207ENST00000565975 YTHDC1Q96MU7 727 aaKnown RBP32.18■■■□□ 2.74
SPNS1-207ENST00000565975 AKNAQ7Z591 1439 aa32.16■■■□□ 2.74
SPNS1-207ENST00000565975 GCC2Q8IWJ2 1684 aa32.11■■■□□ 2.73
SPNS1-207ENST00000565975 SYNJ2O15056 1496 aa32.08■■■□□ 2.73
SPNS1-207ENST00000565975 RAPGEF6Q8TEU7 1601 aa32.07■■■□□ 2.72
SPNS1-207ENST00000565975 PPP1R15AO75807 674 aaPredicted RBP32.07■■■□□ 2.72
SPNS1-207ENST00000565975 OSCARQ8IYS5 282 aa32.05■■■□□ 2.72
SPNS1-207ENST00000565975 NUP153P49790 1475 aaKnown RBP32.04■■■□□ 2.72
SPNS1-207ENST00000565975 CEP170Q5SW79 1584 aa32■■■□□ 2.71
SPNS1-207ENST00000565975 TONSLQ96HA7 1378 aa31.98■■■□□ 2.71
SPNS1-207ENST00000565975 CHMP7Q8WUX9 453 aaPredicted RBP31.94■■■□□ 2.7
SPNS1-207ENST00000565975 NUP160Q12769 1436 aa31.94■■■□□ 2.7
SPNS1-207ENST00000565975 CDK11AQ9UQ88 783 aaPredicted RBP31.93■■■□□ 2.7
SPNS1-207ENST00000565975 ROCK1Q13464 1354 aa31.9■■■□□ 2.7
SPNS1-207ENST00000565975 RRP7BPQ9NSQ0 103 aa31.89■■■□□ 2.7
SPNS1-207ENST00000565975 DNMT1P26358 1616 aaKnown RBP31.88■■■□□ 2.69
SPNS1-207ENST00000565975 PELP1Q8IZL8 1130 aaKnown RBP31.87■■■□□ 2.69
SPNS1-207ENST00000565975 CARMIL2Q6F5E8 1435 aa31.87■■■□□ 2.69
SPNS1-207ENST00000565975 DAPK1P53355 1430 aa31.86■■■□□ 2.69
SPNS1-207ENST00000565975 ARID3CA6NKF2 412 aa31.86■■■□□ 2.69
SPNS1-207ENST00000565975 TROQ12816 1431 aaPredicted RBP31.86■■■□□ 2.69
SPNS1-207ENST00000565975 CHIC2Q9UKJ5 165 aa31.85■■■□□ 2.69
SPNS1-207ENST00000565975 KDM6BO15054 1643 aa31.83■■■□□ 2.69
SPNS1-207ENST00000565975 DENND4BO75064 1496 aaPredicted RBP31.82■■■□□ 2.68
SPNS1-207ENST00000565975 ADCY10Q96PN6 1610 aa31.81■■■□□ 2.68
SPNS1-207ENST00000565975 KDM5BQ9UGL1 1544 aa31.81■■■□□ 2.68
SPNS1-207ENST00000565975 ABCC5O15440 1437 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms