RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
CNOT1-207ENST00000565605 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
CNOT1-207ENST00000565605 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
CNOT1-207ENST00000565605 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
CNOT1-207ENST00000565605 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
CNOT1-207ENST00000565605 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
CNOT1-207ENST00000565605 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.27
CNOT1-207ENST00000565605 ERCC6L2Q5T890 1561 aa16.75■□□□□ 0.27
CNOT1-207ENST00000565605 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
CNOT1-207ENST00000565605 GRIN2AQ12879 1464 aa16.7■□□□□ 0.26
CNOT1-207ENST00000565605 TOP2BQ02880 1626 aa16.69■□□□□ 0.26
CNOT1-207ENST00000565605 BIVM-ERCC5R4GMW8 1640 aa16.68■□□□□ 0.26
CNOT1-207ENST00000565605 POTEHQ6S545 545 aa16.67■□□□□ 0.26
CNOT1-207ENST00000565605 NUP160Q12769 1436 aa16.66■□□□□ 0.26
CNOT1-207ENST00000565605 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
CNOT1-207ENST00000565605 ADAMTS12P58397 1594 aa16.64■□□□□ 0.25
CNOT1-207ENST00000565605 FHAD1B1AJZ9 1412 aa16.6■□□□□ 0.25
CNOT1-207ENST00000565605 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
CNOT1-207ENST00000565605 PRG4Q92954 1404 aaPredicted RBP16.54■□□□□ 0.24
CNOT1-207ENST00000565605 JPH4Q96JJ6 628 aa16.53■□□□□ 0.24
CNOT1-207ENST00000565605 ERICH3Q5RHP9 1530 aa16.52■□□□□ 0.24
CNOT1-207ENST00000565605 KIF13AQ9H1H9 1805 aa16.49■□□□□ 0.23
CNOT1-207ENST00000565605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.46■□□□□ 0.238e-8■■□□□ 12.6
CNOT1-207ENST00000565605 FAM69CQ0P6D2 419 aa16.45■□□□□ 0.22
CNOT1-207ENST00000565605 ABCC10Q5T3U5 1492 aa16.42■□□□□ 0.22
CNOT1-207ENST00000565605 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
CNOT1-207ENST00000565605 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
CNOT1-207ENST00000565605 NPM1P06748 294 aaKnown RBP eCLIP16.39■□□□□ 0.21
CNOT1-207ENST00000565605 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
CNOT1-207ENST00000565605 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
CNOT1-207ENST00000565605 DIP2BQ9P265 1576 aa16.34■□□□□ 0.21
CNOT1-207ENST00000565605 IGF1RP08069 1367 aa16.34■□□□□ 0.21
CNOT1-207ENST00000565605 KDM4FA0A1W2PPD8 638 aa16.33■□□□□ 0.2
CNOT1-207ENST00000565605 KIAA0586Q9BVV6 1533 aa16.32■□□□□ 0.2
CNOT1-207ENST00000565605 CUL7Q14999 1698 aa16.28■□□□□ 0.2
CNOT1-207ENST00000565605 KDM6BO15054 1643 aa16.26■□□□□ 0.19
CNOT1-207ENST00000565605 TTBK1Q5TCY1 1321 aaPredicted RBP16.25■□□□□ 0.19
CNOT1-207ENST00000565605 PTPRGP23470 1445 aa16.24■□□□□ 0.19
CNOT1-207ENST00000565605 CARMIL1Q5VZK9 1371 aa16.23■□□□□ 0.19
CNOT1-207ENST00000565605 TSPOAP1O95153 1857 aa16.22■□□□□ 0.19
CNOT1-207ENST00000565605 TNIKQ9UKE5 1360 aa16.17■□□□□ 0.18
CNOT1-207ENST00000565605 ABCC2Q92887 1545 aa16.16■□□□□ 0.18
CNOT1-207ENST00000565605 ASXL2Q76L83 1435 aa16.16■□□□□ 0.18
CNOT1-207ENST00000565605 CARMIL2Q6F5E8 1435 aa16.14■□□□□ 0.17
CNOT1-207ENST00000565605 RAPGEF2Q9Y4G8 1499 aa16.14■□□□□ 0.17
CNOT1-207ENST00000565605 PPRC1Q5VV67 1664 aaKnown RBP16.11■□□□□ 0.17
CNOT1-207ENST00000565605 PLB1Q6P1J6 1458 aa16.11■□□□□ 0.17
CNOT1-207ENST00000565605 COL17A1Q9UMD9 1497 aaPredicted RBP16.11■□□□□ 0.17
CNOT1-207ENST00000565605 UHRF1BP1LA0JNW5 1464 aa16.1■□□□□ 0.17
CNOT1-207ENST00000565605 GLI2P10070 1586 aa16.1■□□□□ 0.17
CNOT1-207ENST00000565605 UACAQ9BZF9 1416 aa16.1■□□□□ 0.17
CNOT1-207ENST00000565605 DISP1Q96F81 1524 aa16.09■□□□□ 0.17
CNOT1-207ENST00000565605 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
CNOT1-207ENST00000565605 ILDR1Q86SU0 546 aaPredicted RBP16.09■□□□□ 0.17
CNOT1-207ENST00000565605 EEA1Q15075 1411 aa16.09■□□□□ 0.17
CNOT1-207ENST00000565605 CAPN15O75808 1086 aa16.07■□□□□ 0.16
CNOT1-207ENST00000565605 ADGRL1O94910 1474 aa16.06■□□□□ 0.16
CNOT1-207ENST00000565605 PRXQ9BXM0 1461 aa16.06■□□□□ 0.16
CNOT1-207ENST00000565605 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
CNOT1-207ENST00000565605 EPRSP07814 1512 aaKnown RBP16.05■□□□□ 0.16
CNOT1-207ENST00000565605 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
CNOT1-207ENST00000565605 DSG3P32926 999 aa16.04■□□□□ 0.16
CNOT1-207ENST00000565605 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
CNOT1-207ENST00000565605 FAM9AQ8IZU1 332 aaPredicted RBP16.02■□□□□ 0.16
CNOT1-207ENST00000565605 MAP3K4Q9Y6R4 1608 aa16.01■□□□□ 0.15
CNOT1-207ENST00000565605 UGGT2Q9NYU1 1516 aa16■□□□□ 0.15
CNOT1-207ENST00000565605 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
CNOT1-207ENST00000565605 ZCCHC11Q5TAX3 1644 aaKnown RBP15.98■□□□□ 0.15
CNOT1-207ENST00000565605 CTTNBP2Q8WZ74 1663 aa15.96■□□□□ 0.15
CNOT1-207ENST00000565605 KIAA0556O60303 1618 aa15.96■□□□□ 0.15
CNOT1-207ENST00000565605 TEX14Q8IWB6 1497 aa15.96■□□□□ 0.14
CNOT1-207ENST00000565605 WDR7Q9Y4E6 1490 aa15.93■□□□□ 0.14
CNOT1-207ENST00000565605 HECW2Q9P2P5 1572 aa15.92■□□□□ 0.14
CNOT1-207ENST00000565605 KCNH8Q96L42 1107 aa15.91■□□□□ 0.14
CNOT1-207ENST00000565605 U3KPZ7 1027 aaPredicted RBP15.91■□□□□ 0.14
CNOT1-207ENST00000565605 KIF21BO75037 1637 aa15.9■□□□□ 0.14
CNOT1-207ENST00000565605 GOLGA3Q08378 1498 aa15.89■□□□□ 0.13
CNOT1-207ENST00000565605 CD109Q6YHK3 1445 aa15.88■□□□□ 0.13
CNOT1-207ENST00000565605 MAGI3Q5TCQ9 1506 aa15.87■□□□□ 0.13
CNOT1-207ENST00000565605 ABCA8O94911 1581 aa15.85■□□□□ 0.13
CNOT1-207ENST00000565605 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
CNOT1-207ENST00000565605 ARID3CA6NKF2 412 aa15.81■□□□□ 0.12
CNOT1-207ENST00000565605 CFAP43Q8NDM7 1665 aa15.81■□□□□ 0.12
CNOT1-207ENST00000565605 UBTFP17480 764 aaKnown RBP15.8■□□□□ 0.12
CNOT1-207ENST00000565605 RANGAP1P46060 587 aaPredicted RBP15.78■□□□□ 0.12
CNOT1-207ENST00000565605 P3H3Q8IVL6 736 aa15.77■□□□□ 0.12
CNOT1-207ENST00000565605 NPM3O75607 178 aaKnown RBP15.76■□□□□ 0.11
CNOT1-207ENST00000565605 ATP10BO94823 1461 aa15.76■□□□□ 0.11
CNOT1-207ENST00000565605 SAMD9Q5K651 1589 aa15.75■□□□□ 0.11
CNOT1-207ENST00000565605 ARAP3Q8WWN8 1544 aa15.75■□□□□ 0.11
CNOT1-207ENST00000565605 RAPGEF3O95398 923 aa15.72■□□□□ 0.11
CNOT1-207ENST00000565605 EFCAB5A4FU69 1503 aa15.72■□□□□ 0.11
CNOT1-207ENST00000565605 FHOD3Q2V2M9 1422 aa15.68■□□□□ 0.1
CNOT1-207ENST00000565605 PTPRMP28827 1452 aa15.68■□□□□ 0.1
CNOT1-207ENST00000565605 ABCA9Q8IUA7 1624 aa15.67■□□□□ 0.1
CNOT1-207ENST00000565605 PHLDB1Q86UU1 1377 aa15.66■□□□□ 0.1
CNOT1-207ENST00000565605 FBXO41Q8TF61 875 aa15.66■□□□□ 0.1
CNOT1-207ENST00000565605 ADAMTSL3P82987 1691 aa15.66■□□□□ 0.1
CNOT1-207ENST00000565605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
CNOT1-207ENST00000565605 ABCB7O75027 752 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms