RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 AEBP2Q6ZN18 517 aaPredicted RBP26.84■■□□□ 1.89
CNOT1-207ENST00000565605 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
CNOT1-207ENST00000565605 NISCHQ9Y2I1 1504 aa23.37■■□□□ 1.33
CNOT1-207ENST00000565605 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
CNOT1-207ENST00000565605 PHF23Q9BUL5 403 aaPredicted RBP22.67■■□□□ 1.22
CNOT1-207ENST00000565605 FOXD1Q16676 465 aa21.59■■□□□ 1.05
CNOT1-207ENST00000565605 POTEDQ86YR6 584 aa21.45■■□□□ 1.02
CNOT1-207ENST00000565605 ABCC9O60706 1549 aa21.35■■□□□ 1.01
CNOT1-207ENST00000565605 CCDC180Q9P1Z9 1646 aa20.99■□□□□ 0.95
CNOT1-207ENST00000565605 MSH5O43196 834 aa20.52■□□□□ 0.88
CNOT1-207ENST00000565605 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
CNOT1-207ENST00000565605 RB1CC1Q8TDY2 1594 aa20.13■□□□□ 0.81
CNOT1-207ENST00000565605 PIAS4Q8N2W9 510 aaPredicted RBP20.04■□□□□ 0.8
CNOT1-207ENST00000565605 NACADO15069 1562 aa19.94■□□□□ 0.78
CNOT1-207ENST00000565605 DCAF8L2P0C7V8 631 aa19.9■□□□□ 0.78
CNOT1-207ENST00000565605 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.78
CNOT1-207ENST00000565605 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
CNOT1-207ENST00000565605 BICRAQ9NZM4 1560 aa19.62■□□□□ 0.73
CNOT1-207ENST00000565605 MYO15BQ96JP2 1530 aa19.57■□□□□ 0.72
CNOT1-207ENST00000565605 PPP6R1Q9UPN7 881 aa19.56■□□□□ 0.72
CNOT1-207ENST00000565605 ADRA2BP18089 450 aa19.5■□□□□ 0.71
CNOT1-207ENST00000565605 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
CNOT1-207ENST00000565605 PLPPR3Q6T4P5 718 aa19.39■□□□□ 0.69
CNOT1-207ENST00000565605 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
CNOT1-207ENST00000565605 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
CNOT1-207ENST00000565605 CECR2Q9BXF3 1484 aa19.24■□□□□ 0.67
CNOT1-207ENST00000565605 SHROOM4Q9ULL8 1493 aa19.23■□□□□ 0.67
CNOT1-207ENST00000565605 SCRIBQ14160 1630 aa19.18■□□□□ 0.66
CNOT1-207ENST00000565605 EIF4G1Q04637 1599 aaKnown RBP19.14■□□□□ 0.65
CNOT1-207ENST00000565605 DNAJC5Q9H3Z4 198 aa18.81■□□□□ 0.6
CNOT1-207ENST00000565605 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
CNOT1-207ENST00000565605 CUX2O14529 1486 aa18.45■□□□□ 0.54
CNOT1-207ENST00000565605 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
CNOT1-207ENST00000565605 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
CNOT1-207ENST00000565605 NESP48681 1621 aa18.3■□□□□ 0.52
CNOT1-207ENST00000565605 SMARCA4P51532 1647 aa18.26■□□□□ 0.51
CNOT1-207ENST00000565605 HMGXB3Q12766 1538 aa18.25■□□□□ 0.51
CNOT1-207ENST00000565605 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
CNOT1-207ENST00000565605 CACNB1Q02641 598 aaPredicted RBP18.22■□□□□ 0.51
CNOT1-207ENST00000565605 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
CNOT1-207ENST00000565605 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
CNOT1-207ENST00000565605 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
CNOT1-207ENST00000565605 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
CNOT1-207ENST00000565605 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.49
CNOT1-207ENST00000565605 PEG3Q9GZU2 1588 aa18.08■□□□□ 0.48
CNOT1-207ENST00000565605 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
CNOT1-207ENST00000565605 LAMC3Q9Y6N6 1575 aa18.03■□□□□ 0.48
CNOT1-207ENST00000565605 PDS5BQ9NTI5 1447 aa17.97■□□□□ 0.47
CNOT1-207ENST00000565605 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
CNOT1-207ENST00000565605 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
CNOT1-207ENST00000565605 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
CNOT1-207ENST00000565605 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
CNOT1-207ENST00000565605 MRC2Q9UBG0 1479 aa17.83■□□□□ 0.45
CNOT1-207ENST00000565605 WDR62O43379 1518 aa17.79■□□□□ 0.44
CNOT1-207ENST00000565605 WIZO95785 1651 aa17.78■□□□□ 0.44
CNOT1-207ENST00000565605 RSF1Q96T23 1441 aaPredicted RBP17.73■□□□□ 0.43
CNOT1-207ENST00000565605 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
CNOT1-207ENST00000565605 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
CNOT1-207ENST00000565605 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
CNOT1-207ENST00000565605 CFTRP13569 1480 aa17.63■□□□□ 0.41
CNOT1-207ENST00000565605 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
CNOT1-207ENST00000565605 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
CNOT1-207ENST00000565605 URB2Q14146 1524 aaKnown RBP17.57■□□□□ 0.4
CNOT1-207ENST00000565605 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
CNOT1-207ENST00000565605 RNF39Q9H2S5 420 aa17.41■□□□□ 0.38
CNOT1-207ENST00000565605 RIMBP3CA6NJZ7 1639 aa17.38■□□□□ 0.37
CNOT1-207ENST00000565605 RIMBP3BA6NNM3 1639 aa17.38■□□□□ 0.37
CNOT1-207ENST00000565605 RIMBP3Q9UFD9 1639 aa17.38■□□□□ 0.37
CNOT1-207ENST00000565605 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
CNOT1-207ENST00000565605 IFT140Q96RY7 1462 aa17.36■□□□□ 0.37
CNOT1-207ENST00000565605 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
CNOT1-207ENST00000565605 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
CNOT1-207ENST00000565605 PRDM2Q13029 1718 aa17.31■□□□□ 0.36
CNOT1-207ENST00000565605 SUPT5HO00267 1087 aaKnown RBP17.31■□□□□ 0.36
CNOT1-207ENST00000565605 CYB5RLQ6IPT4 315 aa17.26■□□□□ 0.35
CNOT1-207ENST00000565605 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
CNOT1-207ENST00000565605 AQRO60306 1485 aaKnown RBP eCLIP17.23■□□□□ 0.356e-7■■■■□ 24.2
CNOT1-207ENST00000565605 ABCC8Q09428 1581 aa17.21■□□□□ 0.35
CNOT1-207ENST00000565605 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
CNOT1-207ENST00000565605 TARBP1Q13395 1621 aaKnown RBP17.18■□□□□ 0.34
CNOT1-207ENST00000565605 FBLN2P98095 1184 aa17.16■□□□□ 0.34
CNOT1-207ENST00000565605 ARAP1Q96P48 1450 aa17.14■□□□□ 0.33
CNOT1-207ENST00000565605 CHD1O14646 1710 aa17.14■□□□□ 0.33
CNOT1-207ENST00000565605 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
CNOT1-207ENST00000565605 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
CNOT1-207ENST00000565605 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
CNOT1-207ENST00000565605 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
CNOT1-207ENST00000565605 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
CNOT1-207ENST00000565605 TDRD9Q8NDG6 1382 aaKnown RBP17.09■□□□□ 0.33
CNOT1-207ENST00000565605 SOGA1O94964 1423 aa17.06■□□□□ 0.32
CNOT1-207ENST00000565605 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
CNOT1-207ENST00000565605 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
CNOT1-207ENST00000565605 CLASP1Q7Z460 1538 aa16.98■□□□□ 0.31
CNOT1-207ENST00000565605 CHMP7Q8WUX9 453 aaPredicted RBP16.98■□□□□ 0.31
CNOT1-207ENST00000565605 CUX1P39880 1505 aa16.95■□□□□ 0.3
CNOT1-207ENST00000565605 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
CNOT1-207ENST00000565605 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
CNOT1-207ENST00000565605 GRIN2BQ13224 1484 aa16.91■□□□□ 0.3
CNOT1-207ENST00000565605 SYNJ1O43426 1573 aa16.9■□□□□ 0.3
CNOT1-207ENST00000565605 WDR97A6NE52 1622 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms