RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 IGF1RP08069 1367 aa13.56□□□□□ -0.24
AC138869.3-201ENST00000563960 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
AC138869.3-201ENST00000563960 MIER1Q8N108 512 aa13.55□□□□□ -0.24
AC138869.3-201ENST00000563960 GAPVD1Q14C86 1478 aa13.53□□□□□ -0.24
AC138869.3-201ENST00000563960 EEA1Q15075 1411 aa13.52□□□□□ -0.25
AC138869.3-201ENST00000563960 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
AC138869.3-201ENST00000563960 CLSPNQ9HAW4 1339 aa13.49□□□□□ -0.25
AC138869.3-201ENST00000563960 RANGAP1P46060 587 aaPredicted RBP13.48□□□□□ -0.25
AC138869.3-201ENST00000563960 FBLN2P98095 1184 aa13.48□□□□□ -0.25
AC138869.3-201ENST00000563960 CARMIL1Q5VZK9 1371 aa13.48□□□□□ -0.25
AC138869.3-201ENST00000563960 WDR97A6NE52 1622 aa13.47□□□□□ -0.25
AC138869.3-201ENST00000563960 ABCA5Q8WWZ7 1642 aa13.46□□□□□ -0.26
AC138869.3-201ENST00000563960 RAPGEF2Q9Y4G8 1499 aa13.45□□□□□ -0.26
AC138869.3-201ENST00000563960 EIF4G3O43432 1585 aaKnown RBP13.44□□□□□ -0.26
AC138869.3-201ENST00000563960 GRIN2BQ13224 1484 aa13.44□□□□□ -0.26
AC138869.3-201ENST00000563960 PRXQ9BXM0 1461 aa13.43□□□□□ -0.26
AC138869.3-201ENST00000563960 SNAPC4Q5SXM2 1469 aa13.41□□□□□ -0.26
AC138869.3-201ENST00000563960 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
AC138869.3-201ENST00000563960 ERICH3Q5RHP9 1530 aa13.39□□□□□ -0.27
AC138869.3-201ENST00000563960 GOLGA3Q08378 1498 aa13.38□□□□□ -0.27
AC138869.3-201ENST00000563960 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
AC138869.3-201ENST00000563960 PBRM1Q86U86 1689 aa13.36□□□□□ -0.27
AC138869.3-201ENST00000563960 KIF21BO75037 1637 aa13.34□□□□□ -0.27
AC138869.3-201ENST00000563960 MAGI1Q96QZ7 1491 aaPredicted RBP13.31□□□□□ -0.28
AC138869.3-201ENST00000563960 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
AC138869.3-201ENST00000563960 ADAMTS12P58397 1594 aa13.31□□□□□ -0.28
AC138869.3-201ENST00000563960 CUL7Q14999 1698 aa13.31□□□□□ -0.28
AC138869.3-201ENST00000563960 SYNJ2O15056 1496 aa13.3□□□□□ -0.28
AC138869.3-201ENST00000563960 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
AC138869.3-201ENST00000563960 P3H3Q8IVL6 736 aa13.28□□□□□ -0.28
AC138869.3-201ENST00000563960 GRIN2AQ12879 1464 aa13.27□□□□□ -0.28
AC138869.3-201ENST00000563960 RBM19Q9Y4C8 960 aaKnown RBP13.27□□□□□ -0.29
AC138869.3-201ENST00000563960 CEP162Q5TB80 1403 aa13.25□□□□□ -0.29
AC138869.3-201ENST00000563960 MSH5O43196 834 aa13.23□□□□□ -0.29
AC138869.3-201ENST00000563960 CLIP1P30622 1438 aa13.21□□□□□ -0.29
AC138869.3-201ENST00000563960 CEP170Q5SW79 1584 aa13.19□□□□□ -0.3
AC138869.3-201ENST00000563960 JPH4Q96JJ6 628 aa13.19□□□□□ -0.3
AC138869.3-201ENST00000563960 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
AC138869.3-201ENST00000563960 CHD1O14646 1710 aa13.18□□□□□ -0.3
AC138869.3-201ENST00000563960 BCANQ96GW7 911 aa13.18□□□□□ -0.3
AC138869.3-201ENST00000563960 NUP160Q12769 1436 aa13.17□□□□□ -0.3
AC138869.3-201ENST00000563960 KIAA0586Q9BVV6 1533 aa13.17□□□□□ -0.3
AC138869.3-201ENST00000563960 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
AC138869.3-201ENST00000563960 IQGAP2Q13576 1575 aa13.13□□□□□ -0.31
AC138869.3-201ENST00000563960 FHOD3Q2V2M9 1422 aa13.12□□□□□ -0.31
AC138869.3-201ENST00000563960 ATP1B4Q9UN42 357 aaPredicted RBP13.12□□□□□ -0.31
AC138869.3-201ENST00000563960 ARAP1Q96P48 1450 aa13.11□□□□□ -0.31
AC138869.3-201ENST00000563960 CTTNBP2Q8WZ74 1663 aa13.11□□□□□ -0.31
AC138869.3-201ENST00000563960 SALL2Q9Y467 1007 aaPredicted RBP13.11□□□□□ -0.31
AC138869.3-201ENST00000563960 DEKP35659 375 aaKnown RBP13.1□□□□□ -0.31
AC138869.3-201ENST00000563960 PRG4Q92954 1404 aaPredicted RBP13.08□□□□□ -0.32
AC138869.3-201ENST00000563960 FKBP8Q14318 412 aa13.08□□□□□ -0.32
AC138869.3-201ENST00000563960 MYT1LQ9UL68 1186 aa13.08□□□□□ -0.32
AC138869.3-201ENST00000563960 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
AC138869.3-201ENST00000563960 UBE2Q2Q8WVN8 375 aa13.06□□□□□ -0.32
AC138869.3-201ENST00000563960 DISP1Q96F81 1524 aa13.06□□□□□ -0.32
AC138869.3-201ENST00000563960 UGGT2Q9NYU1 1516 aa13.05□□□□□ -0.32
AC138869.3-201ENST00000563960 FANCIQ9NVI1 1328 aa13.04□□□□□ -0.32
AC138869.3-201ENST00000563960 ERCC6L2Q5T890 1561 aa13.03□□□□□ -0.32
AC138869.3-201ENST00000563960 CLASP1Q7Z460 1538 aa13.03□□□□□ -0.32
AC138869.3-201ENST00000563960 CARMIL2Q6F5E8 1435 aa13.02□□□□□ -0.32
AC138869.3-201ENST00000563960 VPS8Q8N3P4 1428 aa13.02□□□□□ -0.32
AC138869.3-201ENST00000563960 CCDC136Q96JN2 1154 aa13.02□□□□□ -0.33
AC138869.3-201ENST00000563960 SAMD9Q5K651 1589 aa13.01□□□□□ -0.33
AC138869.3-201ENST00000563960 EFCAB5A4FU69 1503 aa13□□□□□ -0.33
AC138869.3-201ENST00000563960 SLC24A1O60721 1099 aa13□□□□□ -0.33
AC138869.3-201ENST00000563960 ERICH6BQ5W0A0 696 aa13□□□□□ -0.33
AC138869.3-201ENST00000563960 ITGAEP38570 1179 aa12.99□□□□□ -0.33
AC138869.3-201ENST00000563960 KIAA0556O60303 1618 aa12.99□□□□□ -0.33
AC138869.3-201ENST00000563960 PTPRGP23470 1445 aa12.98□□□□□ -0.33
AC138869.3-201ENST00000563960 FOXD1Q16676 465 aa12.98□□□□□ -0.33
AC138869.3-201ENST00000563960 FMN1Q68DA7 1419 aa12.96□□□□□ -0.33
AC138869.3-201ENST00000563960 SHROOM2Q13796 1616 aa12.95□□□□□ -0.34
AC138869.3-201ENST00000563960 PLB1Q6P1J6 1458 aa12.95□□□□□ -0.34
AC138869.3-201ENST00000563960 HNRNPUL2Q1KMD3 747 aaKnown RBP12.95□□□□□ -0.34
AC138869.3-201ENST00000563960 KANK4Q5T7N3 995 aaPredicted RBP12.95□□□□□ -0.34
AC138869.3-201ENST00000563960 KCNH8Q96L42 1107 aa12.95□□□□□ -0.34
AC138869.3-201ENST00000563960 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
AC138869.3-201ENST00000563960 CASKIN1Q8WXD9 1431 aa12.91□□□□□ -0.34
AC138869.3-201ENST00000563960 PCF11O94913 1555 aaKnown RBP12.91□□□□□ -0.34
AC138869.3-201ENST00000563960 NEFLP07196 543 aa12.9□□□□□ -0.34
AC138869.3-201ENST00000563960 ARHGEF11O15085 1522 aa12.88□□□□□ -0.35
AC138869.3-201ENST00000563960 FYCO1Q9BQS8 1478 aa12.86□□□□□ -0.35
AC138869.3-201ENST00000563960 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.86□□□□□ -0.35
AC138869.3-201ENST00000563960 NUP153P49790 1475 aaKnown RBP12.86□□□□□ -0.35
AC138869.3-201ENST00000563960 UACAQ9BZF9 1416 aa12.86□□□□□ -0.35
AC138869.3-201ENST00000563960 CDK13Q14004 1512 aaKnown RBP12.85□□□□□ -0.35
AC138869.3-201ENST00000563960 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
AC138869.3-201ENST00000563960 EPRSP07814 1512 aaKnown RBP12.83□□□□□ -0.35
AC138869.3-201ENST00000563960 RAPGEF6Q8TEU7 1601 aa12.83□□□□□ -0.36
AC138869.3-201ENST00000563960 ABCA8O94911 1581 aa12.82□□□□□ -0.36
AC138869.3-201ENST00000563960 ATP10BO94823 1461 aa12.81□□□□□ -0.36
AC138869.3-201ENST00000563960 MTUS2Q5JR59 1369 aa12.81□□□□□ -0.36
AC138869.3-201ENST00000563960 CDK11AQ9UQ88 783 aaPredicted RBP12.81□□□□□ -0.36
AC138869.3-201ENST00000563960 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
AC138869.3-201ENST00000563960 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
AC138869.3-201ENST00000563960 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
AC138869.3-201ENST00000563960 NBR1Q14596 966 aa12.8□□□□□ -0.36
AC138869.3-201ENST00000563960 RTN4Q9NQC3 1192 aaKnown RBP12.8□□□□□ -0.36
AC138869.3-201ENST00000563960 TIAM1Q13009 1591 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms