RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 NISCHQ9Y2I1 1504 aa19.14■□□□□ 0.65
AC138869.3-201ENST00000563960 CCDC180Q9P1Z9 1646 aa16.65■□□□□ 0.26
AC138869.3-201ENST00000563960 ABCC9O60706 1549 aa16.23■□□□□ 0.19
AC138869.3-201ENST00000563960 AEBP2Q6ZN18 517 aaPredicted RBP16.22■□□□□ 0.19
AC138869.3-201ENST00000563960 DCAF8L2P0C7V8 631 aa16.18■□□□□ 0.18
AC138869.3-201ENST00000563960 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
AC138869.3-201ENST00000563960 DCAF1Q9Y4B6 1507 aa15.71■□□□□ 0.11
AC138869.3-201ENST00000563960 PELP1Q8IZL8 1130 aaKnown RBP15.7■□□□□ 0.1
AC138869.3-201ENST00000563960 SHROOM4Q9ULL8 1493 aa15.67■□□□□ 0.1
AC138869.3-201ENST00000563960 NACADO15069 1562 aa15.65■□□□□ 0.1
AC138869.3-201ENST00000563960 MYO15BQ96JP2 1530 aa15.6■□□□□ 0.09
AC138869.3-201ENST00000563960 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
AC138869.3-201ENST00000563960 HRCP23327 699 aa15.56■□□□□ 0.08
AC138869.3-201ENST00000563960 SCRIBQ14160 1630 aa15.46■□□□□ 0.07
AC138869.3-201ENST00000563960 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
AC138869.3-201ENST00000563960 UNC13AQ9UPW8 1703 aa15.23■□□□□ 0.03
AC138869.3-201ENST00000563960 MYT1Q01538 1121 aa15.22■□□□□ 0.03
AC138869.3-201ENST00000563960 PPARGC1BQ86YN6 1023 aaKnown RBP15.22■□□□□ 0.03
AC138869.3-201ENST00000563960 CHIC1Q5VXU3 224 aa15.19■□□□□ 0.02
AC138869.3-201ENST00000563960 BICRAQ9NZM4 1560 aa15.16■□□□□ 0.02
AC138869.3-201ENST00000563960 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
AC138869.3-201ENST00000563960 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
AC138869.3-201ENST00000563960 PCGF6Q9BYE7 350 aa14.98□□□□□ -0.01
AC138869.3-201ENST00000563960 SUPT5HO00267 1087 aaKnown RBP14.98□□□□□ -0.01
AC138869.3-201ENST00000563960 MROH2BQ7Z745 1585 aa14.83□□□□□ -0.04
AC138869.3-201ENST00000563960 RSF1Q96T23 1441 aaPredicted RBP14.81□□□□□ -0.04
AC138869.3-201ENST00000563960 BAZ1AQ9NRL2 1556 aaPredicted RBP14.76□□□□□ -0.05
AC138869.3-201ENST00000563960 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
AC138869.3-201ENST00000563960 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
AC138869.3-201ENST00000563960 WIZO95785 1651 aa14.67□□□□□ -0.06
AC138869.3-201ENST00000563960 DNAJC5BQ9UF47 199 aa14.65□□□□□ -0.06
AC138869.3-201ENST00000563960 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
AC138869.3-201ENST00000563960 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
AC138869.3-201ENST00000563960 SMARCA2P51531 1590 aa14.53□□□□□ -0.08
AC138869.3-201ENST00000563960 BAZ1BQ9UIG0 1483 aaKnown RBP14.51□□□□□ -0.09
AC138869.3-201ENST00000563960 PEG3Q9GZU2 1588 aa14.5□□□□□ -0.09
AC138869.3-201ENST00000563960 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
AC138869.3-201ENST00000563960 ACIN1Q9UKV3 1341 aaKnown RBP14.46□□□□□ -0.09
AC138869.3-201ENST00000563960 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
AC138869.3-201ENST00000563960 TTBK1Q5TCY1 1321 aaPredicted RBP14.44□□□□□ -0.1
AC138869.3-201ENST00000563960 NEUROD1Q13562 356 aa14.41□□□□□ -0.1
AC138869.3-201ENST00000563960 ZEB1P37275 1124 aaPredicted RBP14.4□□□□□ -0.1
AC138869.3-201ENST00000563960 CCDC88BA6NC98 1476 aa14.39□□□□□ -0.11
AC138869.3-201ENST00000563960 HMGXB3Q12766 1538 aa14.39□□□□□ -0.11
AC138869.3-201ENST00000563960 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
AC138869.3-201ENST00000563960 GTF3C3Q9Y5Q9 886 aa14.37□□□□□ -0.11
AC138869.3-201ENST00000563960 BCL11AQ9H165 835 aa14.22□□□□□ -0.13
AC138869.3-201ENST00000563960 NESP48681 1621 aa14.18□□□□□ -0.14
AC138869.3-201ENST00000563960 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
AC138869.3-201ENST00000563960 CENPBP07199 599 aaPredicted RBP14.16□□□□□ -0.14
AC138869.3-201ENST00000563960 LOC105371045A0A1W2PR82 267 aa14.13□□□□□ -0.15
AC138869.3-201ENST00000563960 CFTRP13569 1480 aa14.12□□□□□ -0.15
AC138869.3-201ENST00000563960 FAM9AQ8IZU1 332 aaPredicted RBP14.12□□□□□ -0.15
AC138869.3-201ENST00000563960 PRKCSHP14314 528 aaPredicted RBP14.04□□□□□ -0.16
AC138869.3-201ENST00000563960 TRIM41Q8WV44 630 aa14.03□□□□□ -0.16
AC138869.3-201ENST00000563960 ABCC8Q09428 1581 aa14.03□□□□□ -0.16
AC138869.3-201ENST00000563960 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
AC138869.3-201ENST00000563960 LAMC3Q9Y6N6 1575 aa13.99□□□□□ -0.17
AC138869.3-201ENST00000563960 PDS5BQ9NTI5 1447 aa13.97□□□□□ -0.17
AC138869.3-201ENST00000563960 DIEXFQ68CQ4 756 aaKnown RBP13.94□□□□□ -0.18
AC138869.3-201ENST00000563960 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
AC138869.3-201ENST00000563960 ERCC6Q03468 1493 aa13.91□□□□□ -0.18
AC138869.3-201ENST00000563960 ANP32EQ9BTT0 268 aa13.9□□□□□ -0.18
AC138869.3-201ENST00000563960 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
AC138869.3-201ENST00000563960 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
AC138869.3-201ENST00000563960 SYNJ1O43426 1573 aa13.87□□□□□ -0.19
AC138869.3-201ENST00000563960 KIF21AQ7Z4S6 1674 aa13.87□□□□□ -0.19
AC138869.3-201ENST00000563960 CUX1P39880 1505 aa13.86□□□□□ -0.19
AC138869.3-201ENST00000563960 PRDM2Q13029 1718 aa13.85□□□□□ -0.19
AC138869.3-201ENST00000563960 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.19
AC138869.3-201ENST00000563960 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
AC138869.3-201ENST00000563960 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
AC138869.3-201ENST00000563960 MRC2Q9UBG0 1479 aa13.78□□□□□ -0.2
AC138869.3-201ENST00000563960 TOP2BQ02880 1626 aa13.78□□□□□ -0.2
AC138869.3-201ENST00000563960 EHMT2Q96KQ7 1210 aa13.77□□□□□ -0.21
AC138869.3-201ENST00000563960 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
AC138869.3-201ENST00000563960 SOGA1O94964 1423 aa13.76□□□□□ -0.21
AC138869.3-201ENST00000563960 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
AC138869.3-201ENST00000563960 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
AC138869.3-201ENST00000563960 RAD54L2Q9Y4B4 1467 aa13.75□□□□□ -0.21
AC138869.3-201ENST00000563960 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
AC138869.3-201ENST00000563960 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
AC138869.3-201ENST00000563960 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
AC138869.3-201ENST00000563960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
AC138869.3-201ENST00000563960 PHF23Q9BUL5 403 aaPredicted RBP13.69□□□□□ -0.22
AC138869.3-201ENST00000563960 THOC2Q8NI27 1593 aaKnown RBP13.68□□□□□ -0.22
AC138869.3-201ENST00000563960 WDR62O43379 1518 aa13.68□□□□□ -0.22
AC138869.3-201ENST00000563960 CCER1Q8TC90 406 aaPredicted RBP13.68□□□□□ -0.22
AC138869.3-201ENST00000563960 TDRD9Q8NDG6 1382 aaKnown RBP13.68□□□□□ -0.22
AC138869.3-201ENST00000563960 CUX2O14529 1486 aa13.67□□□□□ -0.22
AC138869.3-201ENST00000563960 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
AC138869.3-201ENST00000563960 TSHZ2Q9NRE2 1034 aa13.65□□□□□ -0.22
AC138869.3-201ENST00000563960 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.23
AC138869.3-201ENST00000563960 KIF27Q86VH2 1401 aa13.6□□□□□ -0.23
AC138869.3-201ENST00000563960 ZNF608Q9ULD9 1512 aaPredicted RBP13.6□□□□□ -0.23
AC138869.3-201ENST00000563960 ABCA10Q8WWZ4 1543 aa13.58□□□□□ -0.24
AC138869.3-201ENST00000563960 APLP2Q06481 763 aa13.57□□□□□ -0.24
AC138869.3-201ENST00000563960 SUPT16HQ9Y5B9 1047 aaKnown RBP13.57□□□□□ -0.24
AC138869.3-201ENST00000563960 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
AC138869.3-201ENST00000563960 TARBP1Q13395 1621 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms