RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 CUL7Q14999 1698 aa16.49■□□□□ 0.23
CLN6-203ENST00000563917 IGF1RP08069 1367 aa16.49■□□□□ 0.23
CLN6-203ENST00000563917 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
CLN6-203ENST00000563917 KIAA0586Q9BVV6 1533 aa16.45■□□□□ 0.22
CLN6-203ENST00000563917 CARMIL1Q5VZK9 1371 aa16.43■□□□□ 0.22
CLN6-203ENST00000563917 CARMIL2Q6F5E8 1435 aa16.36■□□□□ 0.21
CLN6-203ENST00000563917 AEBP2Q6ZN18 517 aaPredicted RBP16.35■□□□□ 0.21
CLN6-203ENST00000563917 TTBK1Q5TCY1 1321 aaPredicted RBP16.33■□□□□ 0.2
CLN6-203ENST00000563917 PTPRGP23470 1445 aa16.32■□□□□ 0.2
CLN6-203ENST00000563917 FAM69CQ0P6D2 419 aa16.32■□□□□ 0.2
CLN6-203ENST00000563917 IQGAP2Q13576 1575 aa16.3■□□□□ 0.2
CLN6-203ENST00000563917 MAPKBP1O60336 1514 aa16.29■□□□□ 0.2
CLN6-203ENST00000563917 ADCY10Q96PN6 1610 aa16.29■□□□□ 0.2
CLN6-203ENST00000563917 KIF13AQ9H1H9 1805 aa16.29■□□□□ 0.2
CLN6-203ENST00000563917 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
CLN6-203ENST00000563917 ABCC10Q5T3U5 1492 aa16.28■□□□□ 0.2
CLN6-203ENST00000563917 RAPGEF2Q9Y4G8 1499 aa16.28■□□□□ 0.2
CLN6-203ENST00000563917 DIP2BQ9P265 1576 aa16.21■□□□□ 0.19
CLN6-203ENST00000563917 ABCC2Q92887 1545 aa16.19■□□□□ 0.18
CLN6-203ENST00000563917 FAM9AQ8IZU1 332 aaPredicted RBP16.18■□□□□ 0.18
CLN6-203ENST00000563917 UACAQ9BZF9 1416 aa16.18■□□□□ 0.18
CLN6-203ENST00000563917 DISP1Q96F81 1524 aa16.16■□□□□ 0.18
CLN6-203ENST00000563917 UGGT2Q9NYU1 1516 aa16.16■□□□□ 0.18
CLN6-203ENST00000563917 UHRF1BP1LA0JNW5 1464 aa16.16■□□□□ 0.18
CLN6-203ENST00000563917 PLB1Q6P1J6 1458 aa16.16■□□□□ 0.18
CLN6-203ENST00000563917 ASXL2Q76L83 1435 aa16.13■□□□□ 0.17
CLN6-203ENST00000563917 TSPOAP1O95153 1857 aa16.13■□□□□ 0.17
CLN6-203ENST00000563917 GOLGA3Q08378 1498 aa16.12■□□□□ 0.17
CLN6-203ENST00000563917 KDM6BO15054 1643 aa16.12■□□□□ 0.17
CLN6-203ENST00000563917 KIAA0556O60303 1618 aa16.12■□□□□ 0.17
CLN6-203ENST00000563917 CTTNBP2Q8WZ74 1663 aa16.11■□□□□ 0.17
CLN6-203ENST00000563917 KDM5BQ9UGL1 1544 aa16.07■□□□□ 0.16
CLN6-203ENST00000563917 PRXQ9BXM0 1461 aa16.06■□□□□ 0.16
CLN6-203ENST00000563917 GLI2P10070 1586 aa16.05■□□□□ 0.16
CLN6-203ENST00000563917 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
CLN6-203ENST00000563917 ZCCHC11Q5TAX3 1644 aaKnown RBP16.03■□□□□ 0.16
CLN6-203ENST00000563917 EPRSP07814 1512 aaKnown RBP16.01■□□□□ 0.15
CLN6-203ENST00000563917 TEX14Q8IWB6 1497 aa16.01■□□□□ 0.15
CLN6-203ENST00000563917 WDR7Q9Y4E6 1490 aa15.99■□□□□ 0.15
CLN6-203ENST00000563917 EEA1Q15075 1411 aa15.99■□□□□ 0.15
CLN6-203ENST00000563917 P3H3Q8IVL6 736 aa15.97■□□□□ 0.15
CLN6-203ENST00000563917 KCNH8Q96L42 1107 aa15.97■□□□□ 0.15
CLN6-203ENST00000563917 MAP3K4Q9Y6R4 1608 aa15.95■□□□□ 0.14
CLN6-203ENST00000563917 ABCA8O94911 1581 aa15.95■□□□□ 0.14
CLN6-203ENST00000563917 PPRC1Q5VV67 1664 aaKnown RBP15.94■□□□□ 0.14
CLN6-203ENST00000563917 RANGAP1P46060 587 aaPredicted RBP15.91■□□□□ 0.14
CLN6-203ENST00000563917 CD109Q6YHK3 1445 aa15.91■□□□□ 0.14
CLN6-203ENST00000563917 ARID3CA6NKF2 412 aa15.9■□□□□ 0.14
CLN6-203ENST00000563917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
CLN6-203ENST00000563917 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
CLN6-203ENST00000563917 CFAP43Q8NDM7 1665 aa15.89■□□□□ 0.13
CLN6-203ENST00000563917 KDM4FA0A1W2PPD8 638 aa15.88■□□□□ 0.13
CLN6-203ENST00000563917 MAGI3Q5TCQ9 1506 aa15.86■□□□□ 0.13
CLN6-203ENST00000563917 SAMD9Q5K651 1589 aa15.85■□□□□ 0.13
CLN6-203ENST00000563917 COL17A1Q9UMD9 1497 aaPredicted RBP15.84■□□□□ 0.13
CLN6-203ENST00000563917 ATP10BO94823 1461 aa15.84■□□□□ 0.13
CLN6-203ENST00000563917 RAPGEF6Q8TEU7 1601 aa15.82■□□□□ 0.12
CLN6-203ENST00000563917 ADGRL1O94910 1474 aa15.8■□□□□ 0.12
CLN6-203ENST00000563917 FHOD3Q2V2M9 1422 aa15.79■□□□□ 0.12
CLN6-203ENST00000563917 UBTFP17480 764 aaKnown RBP15.79■□□□□ 0.12
CLN6-203ENST00000563917 KIF21BO75037 1637 aa15.79■□□□□ 0.12
CLN6-203ENST00000563917 PHLDB1Q86UU1 1377 aa15.78■□□□□ 0.12
CLN6-203ENST00000563917 PLEKHD1A6NEE1 506 aa15.78■□□□□ 0.12
CLN6-203ENST00000563917 EFCAB5A4FU69 1503 aa15.77■□□□□ 0.11
CLN6-203ENST00000563917 EHMT2Q96KQ7 1210 aa15.75■□□□□ 0.11
CLN6-203ENST00000563917 NUP153P49790 1475 aaKnown RBP15.74■□□□□ 0.11
CLN6-203ENST00000563917 ABCA9Q8IUA7 1624 aa15.74■□□□□ 0.11
CLN6-203ENST00000563917 ARAP3Q8WWN8 1544 aa15.73■□□□□ 0.11
CLN6-203ENST00000563917 CHIC1Q5VXU3 224 aa15.73■□□□□ 0.11
CLN6-203ENST00000563917 NEO1Q92859 1461 aa15.71■□□□□ 0.11
CLN6-203ENST00000563917 ATP1B4Q9UN42 357 aaPredicted RBP15.71■□□□□ 0.11
CLN6-203ENST00000563917 RAPGEF3O95398 923 aa15.67■□□□□ 0.1
CLN6-203ENST00000563917 CDK11AQ9UQ88 783 aaPredicted RBP15.67■□□□□ 0.1
CLN6-203ENST00000563917 FMN1Q68DA7 1419 aa15.67■□□□□ 0.1
CLN6-203ENST00000563917 ARID4BQ4LE39 1312 aaPredicted RBP15.64■□□□□ 0.09
CLN6-203ENST00000563917 CFAP74Q9C0B2 1584 aa15.62■□□□□ 0.09
CLN6-203ENST00000563917 DENND4BO75064 1496 aaPredicted RBP15.61■□□□□ 0.09
CLN6-203ENST00000563917 HECW1Q76N89 1606 aa15.61■□□□□ 0.09
CLN6-203ENST00000563917 AKNAQ7Z591 1439 aa15.6■□□□□ 0.09
CLN6-203ENST00000563917 FANCAO15360 1455 aa15.6■□□□□ 0.09
CLN6-203ENST00000563917 CDK13Q14004 1512 aaKnown RBP15.6■□□□□ 0.09
CLN6-203ENST00000563917 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.59■□□□□ 0.092e-6■■■■□ 19.9
CLN6-203ENST00000563917 ARHGAP35Q9NRY4 1499 aa15.59■□□□□ 0.09
CLN6-203ENST00000563917 TTC37Q6PGP7 1564 aa15.55■□□□□ 0.08
CLN6-203ENST00000563917 HECW2Q9P2P5 1572 aa15.55■□□□□ 0.08
CLN6-203ENST00000563917 CLIP1P30622 1438 aa15.55■□□□□ 0.08
CLN6-203ENST00000563917 EFCAB2Q5VUJ9 269 aa15.54■□□□□ 0.08
CLN6-203ENST00000563917 FRMPD1Q5SYB0 1578 aa15.53■□□□□ 0.08
CLN6-203ENST00000563917 PLCH2O75038 1416 aa15.53■□□□□ 0.08
CLN6-203ENST00000563917 POGZQ7Z3K3 1410 aa15.52■□□□□ 0.08
CLN6-203ENST00000563917 ARHGEF40Q8TER5 1519 aa15.52■□□□□ 0.07
CLN6-203ENST00000563917 SCAPERQ9BY12 1400 aa15.51■□□□□ 0.07
CLN6-203ENST00000563917 MAGI2Q86UL8 1455 aa15.51■□□□□ 0.07
CLN6-203ENST00000563917 RICTORQ6R327 1708 aa15.51■□□□□ 0.07
CLN6-203ENST00000563917 KIF14Q15058 1648 aa15.5■□□□□ 0.07
CLN6-203ENST00000563917 PTPRMP28827 1452 aa15.5■□□□□ 0.07
CLN6-203ENST00000563917 TROQ12816 1431 aaPredicted RBP15.5■□□□□ 0.07
CLN6-203ENST00000563917 ZFYVE16Q7Z3T8 1539 aa15.49■□□□□ 0.07
CLN6-203ENST00000563917 MYO5CQ9NQX4 1742 aa15.49■□□□□ 0.07
CLN6-203ENST00000563917 ADAMTSL3P82987 1691 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms