RNA–Protein interactions for RNA: ENST00000563793.1

SNUPN-202, Transcript of snurportin 1, humanhuman

TSL 4

Gene SNUPN, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-202ENST00000563793 GRIN2AQ12879 1464 aa17.7■□□□□ 0.42
SNUPN-202ENST00000563793 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
SNUPN-202ENST00000563793 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
SNUPN-202ENST00000563793 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
SNUPN-202ENST00000563793 JPH4Q96JJ6 628 aa17.66■□□□□ 0.42
SNUPN-202ENST00000563793 KIF27Q86VH2 1401 aa17.65■□□□□ 0.42
SNUPN-202ENST00000563793 NUP160Q12769 1436 aa17.64■□□□□ 0.42
SNUPN-202ENST00000563793 IGF1RP08069 1367 aa17.6■□□□□ 0.41
SNUPN-202ENST00000563793 ADAMTS12P58397 1594 aa17.6■□□□□ 0.41
SNUPN-202ENST00000563793 NPM1P06748 294 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNUPN-202ENST00000563793 PRG4Q92954 1404 aaPredicted RBP17.54■□□□□ 0.4
SNUPN-202ENST00000563793 CARMIL1Q5VZK9 1371 aa17.53■□□□□ 0.4
SNUPN-202ENST00000563793 CEP170Q5SW79 1584 aa17.52■□□□□ 0.39
SNUPN-202ENST00000563793 KIAA0586Q9BVV6 1533 aa17.47■□□□□ 0.39
SNUPN-202ENST00000563793 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
SNUPN-202ENST00000563793 ERCC6L2Q5T890 1561 aa17.4■□□□□ 0.38
SNUPN-202ENST00000563793 SHROOM2Q13796 1616 aa17.4■□□□□ 0.38
SNUPN-202ENST00000563793 CUL7Q14999 1698 aa17.39■□□□□ 0.37
SNUPN-202ENST00000563793 CARMIL2Q6F5E8 1435 aa17.38■□□□□ 0.37
SNUPN-202ENST00000563793 FAM9AQ8IZU1 332 aaPredicted RBP17.36■□□□□ 0.37
SNUPN-202ENST00000563793 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
SNUPN-202ENST00000563793 PTPRGP23470 1445 aa17.36■□□□□ 0.37
SNUPN-202ENST00000563793 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
SNUPN-202ENST00000563793 FAM69CQ0P6D2 419 aa17.33■□□□□ 0.36
SNUPN-202ENST00000563793 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
SNUPN-202ENST00000563793 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
SNUPN-202ENST00000563793 TNIKQ9UKE5 1360 aa17.31■□□□□ 0.36
SNUPN-202ENST00000563793 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
SNUPN-202ENST00000563793 ZBTB22O15209 634 aa17.27■□□□□ 0.36
SNUPN-202ENST00000563793 IQGAP2Q13576 1575 aa17.2■□□□□ 0.34
SNUPN-202ENST00000563793 ABCC10Q5T3U5 1492 aa17.19■□□□□ 0.34
SNUPN-202ENST00000563793 UACAQ9BZF9 1416 aa17.17■□□□□ 0.34
SNUPN-202ENST00000563793 MAPKBP1O60336 1514 aa17.16■□□□□ 0.34
SNUPN-202ENST00000563793 GOLGA3Q08378 1498 aa17.13■□□□□ 0.33
SNUPN-202ENST00000563793 UGGT2Q9NYU1 1516 aa17.13■□□□□ 0.33
SNUPN-202ENST00000563793 UHRF1BP1LA0JNW5 1464 aa17.12■□□□□ 0.33
SNUPN-202ENST00000563793 PRXQ9BXM0 1461 aa17.12■□□□□ 0.33
SNUPN-202ENST00000563793 ABCC2Q92887 1545 aa17.12■□□□□ 0.33
SNUPN-202ENST00000563793 PLB1Q6P1J6 1458 aa17.12■□□□□ 0.33
SNUPN-202ENST00000563793 DISP1Q96F81 1524 aa17.11■□□□□ 0.33
SNUPN-202ENST00000563793 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
SNUPN-202ENST00000563793 EEA1Q15075 1411 aa17.11■□□□□ 0.33
SNUPN-202ENST00000563793 ASXL2Q76L83 1435 aa17.07■□□□□ 0.32
SNUPN-202ENST00000563793 P3H3Q8IVL6 736 aa17.05■□□□□ 0.32
SNUPN-202ENST00000563793 KDM5BQ9UGL1 1544 aa17.01■□□□□ 0.31
SNUPN-202ENST00000563793 KCNH8Q96L42 1107 aa17.01■□□□□ 0.31
SNUPN-202ENST00000563793 DIP2BQ9P265 1576 aa17.01■□□□□ 0.31
SNUPN-202ENST00000563793 KIAA0556O60303 1618 aa17■□□□□ 0.31
SNUPN-202ENST00000563793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
SNUPN-202ENST00000563793 RANGAP1P46060 587 aaPredicted RBP16.98■□□□□ 0.31
SNUPN-202ENST00000563793 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
SNUPN-202ENST00000563793 KIF13AQ9H1H9 1805 aa16.97■□□□□ 0.31
SNUPN-202ENST00000563793 UBTFP17480 764 aaKnown RBP16.95■□□□□ 0.3
SNUPN-202ENST00000563793 GLI2P10070 1586 aa16.94■□□□□ 0.3
SNUPN-202ENST00000563793 EPRSP07814 1512 aaKnown RBP16.93■□□□□ 0.3
SNUPN-202ENST00000563793 SLC24A1O60721 1099 aa16.93■□□□□ 0.3
SNUPN-202ENST00000563793 TEX14Q8IWB6 1497 aa16.92■□□□□ 0.3
SNUPN-202ENST00000563793 ARID3CA6NKF2 412 aa16.91■□□□□ 0.3
SNUPN-202ENST00000563793 WDR7Q9Y4E6 1490 aa16.91■□□□□ 0.3
SNUPN-202ENST00000563793 CTTNBP2Q8WZ74 1663 aa16.91■□□□□ 0.3
SNUPN-202ENST00000563793 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
SNUPN-202ENST00000563793 KDM6BO15054 1643 aa16.88■□□□□ 0.29
SNUPN-202ENST00000563793 CD109Q6YHK3 1445 aa16.88■□□□□ 0.29
SNUPN-202ENST00000563793 PLEKHD1A6NEE1 506 aa16.88■□□□□ 0.29
SNUPN-202ENST00000563793 ABCA8O94911 1581 aa16.85■□□□□ 0.29
SNUPN-202ENST00000563793 ZCCHC11Q5TAX3 1644 aaKnown RBP16.85■□□□□ 0.29
SNUPN-202ENST00000563793 ATP10BO94823 1461 aa16.83■□□□□ 0.28
SNUPN-202ENST00000563793 TSPOAP1O95153 1857 aa16.82■□□□□ 0.28
SNUPN-202ENST00000563793 ATP1B4Q9UN42 357 aaPredicted RBP16.81■□□□□ 0.28
SNUPN-202ENST00000563793 PHLDB1Q86UU1 1377 aa16.8■□□□□ 0.28
SNUPN-202ENST00000563793 RTN4Q9NQC3 1192 aaKnown RBP16.8■□□□□ 0.28
SNUPN-202ENST00000563793 MAGI3Q5TCQ9 1506 aa16.79■□□□□ 0.28
SNUPN-202ENST00000563793 KDM4FA0A1W2PPD8 638 aa16.78■□□□□ 0.28
SNUPN-202ENST00000563793 CDK11AQ9UQ88 783 aaPredicted RBP16.78■□□□□ 0.28
SNUPN-202ENST00000563793 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
SNUPN-202ENST00000563793 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
SNUPN-202ENST00000563793 SAMD9Q5K651 1589 aa16.75■□□□□ 0.27
SNUPN-202ENST00000563793 KIF21BO75037 1637 aa16.74■□□□□ 0.27
SNUPN-202ENST00000563793 MAP3K4Q9Y6R4 1608 aa16.74■□□□□ 0.27
SNUPN-202ENST00000563793 COL17A1Q9UMD9 1497 aaPredicted RBP16.73■□□□□ 0.27
SNUPN-202ENST00000563793 EFCAB5A4FU69 1503 aa16.72■□□□□ 0.27
SNUPN-202ENST00000563793 FMN1Q68DA7 1419 aa16.7■□□□□ 0.26
SNUPN-202ENST00000563793 RAPGEF6Q8TEU7 1601 aa16.7■□□□□ 0.26
SNUPN-202ENST00000563793 NUP153P49790 1475 aaKnown RBP16.68■□□□□ 0.26
SNUPN-202ENST00000563793 CFAP43Q8NDM7 1665 aa16.68■□□□□ 0.26
SNUPN-202ENST00000563793 PPRC1Q5VV67 1664 aaKnown RBP16.67■□□□□ 0.26
SNUPN-202ENST00000563793 RAPGEF3O95398 923 aa16.65■□□□□ 0.26
SNUPN-202ENST00000563793 ARAP3Q8WWN8 1544 aa16.65■□□□□ 0.26
SNUPN-202ENST00000563793 AMER1Q5JTC6 1135 aaPredicted RBP16.64■□□□□ 0.25
SNUPN-202ENST00000563793 NEO1Q92859 1461 aa16.64■□□□□ 0.25
SNUPN-202ENST00000563793 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
SNUPN-202ENST00000563793 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
SNUPN-202ENST00000563793 ARID4BQ4LE39 1312 aaPredicted RBP16.6■□□□□ 0.25
SNUPN-202ENST00000563793 ADGRL1O94910 1474 aa16.6■□□□□ 0.25
SNUPN-202ENST00000563793 ARHGAP35Q9NRY4 1499 aa16.59■□□□□ 0.25
SNUPN-202ENST00000563793 ABCA9Q8IUA7 1624 aa16.59■□□□□ 0.25
SNUPN-202ENST00000563793 AKNAQ7Z591 1439 aa16.57■□□□□ 0.24
SNUPN-202ENST00000563793 DENND4BO75064 1496 aaPredicted RBP16.56■□□□□ 0.24
SNUPN-202ENST00000563793 CLIP1P30622 1438 aa16.54■□□□□ 0.24
SNUPN-202ENST00000563793 FANCAO15360 1455 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms