RNA–Protein interactions for RNA: ENST00000563793.1

SNUPN-202, Transcript of snurportin 1, humanhuman

TSL 4

Gene SNUPN, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-202ENST00000563793 NISCHQ9Y2I1 1504 aa25■■□□□ 1.59
SNUPN-202ENST00000563793 CHIC1Q5VXU3 224 aa23.94■■□□□ 1.42
SNUPN-202ENST00000563793 AEBP2Q6ZN18 517 aaPredicted RBP23.5■■□□□ 1.35
SNUPN-202ENST00000563793 ABCC9O60706 1549 aa22.22■■□□□ 1.15
SNUPN-202ENST00000563793 CCDC180Q9P1Z9 1646 aa22.22■■□□□ 1.15
SNUPN-202ENST00000563793 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
SNUPN-202ENST00000563793 PHF23Q9BUL5 403 aaPredicted RBP21.28■■□□□ 1
SNUPN-202ENST00000563793 RB1CC1Q8TDY2 1594 aa21.22■□□□□ 0.99
SNUPN-202ENST00000563793 NACADO15069 1562 aa21.12■□□□□ 0.97
SNUPN-202ENST00000563793 MYO15BQ96JP2 1530 aa20.9■□□□□ 0.94
SNUPN-202ENST00000563793 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
SNUPN-202ENST00000563793 DNAJC5BQ9UF47 199 aa20.72■□□□□ 0.91
SNUPN-202ENST00000563793 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
SNUPN-202ENST00000563793 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
SNUPN-202ENST00000563793 BICRAQ9NZM4 1560 aa20.43■□□□□ 0.86
SNUPN-202ENST00000563793 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.86
SNUPN-202ENST00000563793 SHROOM4Q9ULL8 1493 aa20.37■□□□□ 0.85
SNUPN-202ENST00000563793 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
SNUPN-202ENST00000563793 CECR2Q9BXF3 1484 aa20.04■□□□□ 0.8
SNUPN-202ENST00000563793 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
SNUPN-202ENST00000563793 CC2D2AQ9P2K1 1620 aa19.98■□□□□ 0.79
SNUPN-202ENST00000563793 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
SNUPN-202ENST00000563793 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
SNUPN-202ENST00000563793 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
SNUPN-202ENST00000563793 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
SNUPN-202ENST00000563793 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
SNUPN-202ENST00000563793 BAZ1AQ9NRL2 1556 aaPredicted RBP19.41■□□□□ 0.7
SNUPN-202ENST00000563793 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
SNUPN-202ENST00000563793 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
SNUPN-202ENST00000563793 BAZ1BQ9UIG0 1483 aaKnown RBP19.31■□□□□ 0.68
SNUPN-202ENST00000563793 ERCC6Q03468 1493 aa19.27■□□□□ 0.67
SNUPN-202ENST00000563793 MROH2BQ7Z745 1585 aa19.22■□□□□ 0.67
SNUPN-202ENST00000563793 PEG3Q9GZU2 1588 aa19.2■□□□□ 0.66
SNUPN-202ENST00000563793 CUX2O14529 1486 aa19.12■□□□□ 0.65
SNUPN-202ENST00000563793 NESP48681 1621 aa19.07■□□□□ 0.64
SNUPN-202ENST00000563793 PDS5BQ9NTI5 1447 aa19.06■□□□□ 0.64
SNUPN-202ENST00000563793 DNAJC5Q9H3Z4 198 aa19.05■□□□□ 0.64
SNUPN-202ENST00000563793 CADPSQ9ULU8 1353 aa19.03■□□□□ 0.64
SNUPN-202ENST00000563793 LAMC3Q9Y6N6 1575 aa19.01■□□□□ 0.63
SNUPN-202ENST00000563793 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
SNUPN-202ENST00000563793 WIZO95785 1651 aa18.92■□□□□ 0.62
SNUPN-202ENST00000563793 TOP2AP11388 1531 aaKnown RBP18.77■□□□□ 0.6
SNUPN-202ENST00000563793 CFTRP13569 1480 aa18.76■□□□□ 0.59
SNUPN-202ENST00000563793 MRC2Q9UBG0 1479 aa18.76■□□□□ 0.59
SNUPN-202ENST00000563793 CEP164Q9UPV0 1460 aa18.73■□□□□ 0.59
SNUPN-202ENST00000563793 ADRA2BP18089 450 aa18.73■□□□□ 0.59
SNUPN-202ENST00000563793 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
SNUPN-202ENST00000563793 FANCD2Q9BXW9 1451 aa18.72■□□□□ 0.59
SNUPN-202ENST00000563793 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
SNUPN-202ENST00000563793 KIF21AQ7Z4S6 1674 aa18.67■□□□□ 0.58
SNUPN-202ENST00000563793 KCNA4P22459 653 aa18.65■□□□□ 0.58
SNUPN-202ENST00000563793 CCDC88BA6NC98 1476 aa18.63■□□□□ 0.57
SNUPN-202ENST00000563793 WDR62O43379 1518 aa18.61■□□□□ 0.57
SNUPN-202ENST00000563793 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
SNUPN-202ENST00000563793 URB2Q14146 1524 aaKnown RBP18.48■□□□□ 0.55
SNUPN-202ENST00000563793 ABCC8Q09428 1581 aa18.47■□□□□ 0.55
SNUPN-202ENST00000563793 SUPT5HO00267 1087 aaKnown RBP18.43■□□□□ 0.54
SNUPN-202ENST00000563793 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
SNUPN-202ENST00000563793 IFT140Q96RY7 1462 aa18.39■□□□□ 0.53
SNUPN-202ENST00000563793 TOPBP1Q92547 1522 aa18.34■□□□□ 0.53
SNUPN-202ENST00000563793 TRIM41Q8WV44 630 aa18.3■□□□□ 0.52
SNUPN-202ENST00000563793 PRDM2Q13029 1718 aa18.27■□□□□ 0.52
SNUPN-202ENST00000563793 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
SNUPN-202ENST00000563793 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
SNUPN-202ENST00000563793 SOGA1O94964 1423 aa18.23■□□□□ 0.51
SNUPN-202ENST00000563793 FBLN2P98095 1184 aa18.21■□□□□ 0.51
SNUPN-202ENST00000563793 AQRO60306 1485 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNUPN-202ENST00000563793 POLA1P09884 1462 aaPredicted RBP18.16■□□□□ 0.5
SNUPN-202ENST00000563793 TDRD9Q8NDG6 1382 aaKnown RBP18.15■□□□□ 0.5
SNUPN-202ENST00000563793 FOXD1Q16676 465 aa18.14■□□□□ 0.49
SNUPN-202ENST00000563793 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
SNUPN-202ENST00000563793 RAD54L2Q9Y4B4 1467 aa18.11■□□□□ 0.49
SNUPN-202ENST00000563793 FGD5Q6ZNL6 1462 aa18.07■□□□□ 0.48
SNUPN-202ENST00000563793 TARBP1Q13395 1621 aaKnown RBP18.06■□□□□ 0.48
SNUPN-202ENST00000563793 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
SNUPN-202ENST00000563793 CUX1P39880 1505 aa18.03■□□□□ 0.48
SNUPN-202ENST00000563793 CSRNP3Q8WYN3 585 aa18.03■□□□□ 0.48
SNUPN-202ENST00000563793 CYB5RLQ6IPT4 315 aa18■□□□□ 0.47
SNUPN-202ENST00000563793 GRIN2BQ13224 1484 aa18■□□□□ 0.47
SNUPN-202ENST00000563793 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
SNUPN-202ENST00000563793 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
SNUPN-202ENST00000563793 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
SNUPN-202ENST00000563793 GAPVD1Q14C86 1478 aa17.95■□□□□ 0.46
SNUPN-202ENST00000563793 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
SNUPN-202ENST00000563793 ARHGEF11O15085 1522 aa17.91■□□□□ 0.46
SNUPN-202ENST00000563793 ABCA10Q8WWZ4 1543 aa17.9■□□□□ 0.46
SNUPN-202ENST00000563793 SYNJ2O15056 1496 aa17.89■□□□□ 0.45
SNUPN-202ENST00000563793 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
SNUPN-202ENST00000563793 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
SNUPN-202ENST00000563793 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
SNUPN-202ENST00000563793 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
SNUPN-202ENST00000563793 SYNJ1O43426 1573 aa17.83■□□□□ 0.44
SNUPN-202ENST00000563793 CHD1O14646 1710 aa17.81■□□□□ 0.44
SNUPN-202ENST00000563793 TRHP20396 242 aaPredicted RBP17.8■□□□□ 0.44
SNUPN-202ENST00000563793 TOP2BQ02880 1626 aa17.79■□□□□ 0.44
SNUPN-202ENST00000563793 FHAD1B1AJZ9 1412 aa17.76■□□□□ 0.43
SNUPN-202ENST00000563793 ARAP1Q96P48 1450 aa17.73■□□□□ 0.43
SNUPN-202ENST00000563793 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
SNUPN-202ENST00000563793 ABCA5Q8WWZ7 1642 aa17.72■□□□□ 0.43
SNUPN-202ENST00000563793 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms