RNA–Protein interactions for RNA: ENST00000563290.5

SCAPER-207, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAPER, Length 5,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-207ENST00000563290 BICRAQ9NZM4 1560 aa8.35□□□□□ -1.07
SCAPER-207ENST00000563290 ZNF326Q5BKZ1 582 aaKnown RBP8.35□□□□□ -1.07
SCAPER-207ENST00000563290 CHIC2Q9UKJ5 165 aa8.35□□□□□ -1.07
SCAPER-207ENST00000563290 RBM19Q9Y4C8 960 aaKnown RBP8.33□□□□□ -1.08
SCAPER-207ENST00000563290 HMGXB3Q12766 1538 aa8.32□□□□□ -1.08
SCAPER-207ENST00000563290 KCNH8Q96L42 1107 aa8.31□□□□□ -1.08
SCAPER-207ENST00000563290 RAPGEF2Q9Y4G8 1499 aa8.31□□□□□ -1.08
SCAPER-207ENST00000563290 CNGB1Q14028 1251 aaPredicted RBP8.31□□□□□ -1.08
SCAPER-207ENST00000563290 VPS8Q8N3P4 1428 aa8.3□□□□□ -1.08
SCAPER-207ENST00000563290 CC2D2AQ9P2K1 1620 aa8.3□□□□□ -1.08
SCAPER-207ENST00000563290 SLC4A1APQ9BWU0 796 aaKnown RBP8.3□□□□□ -1.08
SCAPER-207ENST00000563290 TONSLQ96HA7 1378 aa8.3□□□□□ -1.08
SCAPER-207ENST00000563290 CFDP1Q9UEE9 299 aaPredicted RBP8.29□□□□□ -1.08
SCAPER-207ENST00000563290 CFTRP13569 1480 aa8.29□□□□□ -1.08
SCAPER-207ENST00000563290 ESF1Q9H501 851 aaKnown RBP8.28□□□□□ -1.08
SCAPER-207ENST00000563290 CARMIL2Q6F5E8 1435 aa8.28□□□□□ -1.08
SCAPER-207ENST00000563290 MSH5O43196 834 aa8.28□□□□□ -1.08
SCAPER-207ENST00000563290 BCANQ96GW7 911 aa8.28□□□□□ -1.08
SCAPER-207ENST00000563290 RUSC2Q8N2Y8 1516 aa8.27□□□□□ -1.09
SCAPER-207ENST00000563290 FKBP8Q14318 412 aa8.27□□□□□ -1.09
SCAPER-207ENST00000563290 RRP7BPQ9NSQ0 103 aa8.27□□□□□ -1.09
SCAPER-207ENST00000563290 FGD5Q6ZNL6 1462 aa8.27□□□□□ -1.09
SCAPER-207ENST00000563290 DHX57Q6P158 1386 aaKnown RBP8.27□□□□□ -1.09
SCAPER-207ENST00000563290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.26□□□□□ -1.092e-6■■■□□ 18.3
SCAPER-207ENST00000563290 FMN1Q68DA7 1419 aa8.26□□□□□ -1.09
SCAPER-207ENST00000563290 ANP32CO43423 234 aa8.26□□□□□ -1.09
SCAPER-207ENST00000563290 DAXXQ9UER7 740 aaPredicted RBP8.26□□□□□ -1.09
SCAPER-207ENST00000563290 FANCIQ9NVI1 1328 aa8.24□□□□□ -1.09
SCAPER-207ENST00000563290 CCNB3Q8WWL7 1395 aa8.24□□□□□ -1.09
SCAPER-207ENST00000563290 KIF21BO75037 1637 aa8.24□□□□□ -1.09
SCAPER-207ENST00000563290 IGF1RP08069 1367 aa8.24□□□□□ -1.09
SCAPER-207ENST00000563290 PLPPR3Q6T4P5 718 aa8.24□□□□□ -1.09
SCAPER-207ENST00000563290 UNC13AQ9UPW8 1703 aa8.23□□□□□ -1.09
SCAPER-207ENST00000563290 GAPVD1Q14C86 1478 aa8.22□□□□□ -1.09
SCAPER-207ENST00000563290 CHGAP10645 457 aaKnown RBP8.22□□□□□ -1.09
SCAPER-207ENST00000563290 RAD54L2Q9Y4B4 1467 aa8.22□□□□□ -1.09
SCAPER-207ENST00000563290 JPH4Q96JJ6 628 aa8.21□□□□□ -1.1
SCAPER-207ENST00000563290 STAG3Q9UJ98 1225 aa8.21□□□□□ -1.1
SCAPER-207ENST00000563290 KANK4Q5T7N3 995 aaPredicted RBP8.21□□□□□ -1.1
SCAPER-207ENST00000563290 NESP48681 1621 aa8.2□□□□□ -1.1
SCAPER-207ENST00000563290 PEG3Q9GZU2 1588 aa8.2□□□□□ -1.1
SCAPER-207ENST00000563290 RTN4Q9NQC3 1192 aaKnown RBP8.19□□□□□ -1.1
SCAPER-207ENST00000563290 FHOD3Q2V2M9 1422 aa8.19□□□□□ -1.1
SCAPER-207ENST00000563290 ARHGAP35Q9NRY4 1499 aa8.19□□□□□ -1.1
SCAPER-207ENST00000563290 SYNJ1O43426 1573 aa8.17□□□□□ -1.1
SCAPER-207ENST00000563290 MRC2Q9UBG0 1479 aa8.17□□□□□ -1.1
SCAPER-207ENST00000563290 TOP2BQ02880 1626 aa8.16□□□□□ -1.1
SCAPER-207ENST00000563290 DEKP35659 375 aaKnown RBP8.15□□□□□ -1.1
SCAPER-207ENST00000563290 TOPBP1Q92547 1522 aa8.15□□□□□ -1.1
SCAPER-207ENST00000563290 PODXL2Q9NZ53 605 aa8.15□□□□□ -1.1
SCAPER-207ENST00000563290 KDM2AQ9Y2K7 1162 aa8.15□□□□□ -1.1
SCAPER-207ENST00000563290 AQRO60306 1485 aaKnown RBP eCLIP8.15□□□□□ -1.1
SCAPER-207ENST00000563290 CUX1P39880 1505 aa8.14□□□□□ -1.11
SCAPER-207ENST00000563290 GRIN2BQ13224 1484 aa8.14□□□□□ -1.11
SCAPER-207ENST00000563290 TULP1O00294 542 aaPredicted RBP8.13□□□□□ -1.11
SCAPER-207ENST00000563290 LAMC3Q9Y6N6 1575 aa8.13□□□□□ -1.11
SCAPER-207ENST00000563290 IFT140Q96RY7 1462 aa8.12□□□□□ -1.11
SCAPER-207ENST00000563290 SETD5Q9C0A6 1442 aa8.12□□□□□ -1.11
SCAPER-207ENST00000563290 DDX10Q13206 875 aaKnown RBP8.12□□□□□ -1.11
SCAPER-207ENST00000563290 EFCAB2Q5VUJ9 269 aa8.12□□□□□ -1.11
SCAPER-207ENST00000563290 DNAJC5BQ9UF47 199 aa8.12□□□□□ -1.11
SCAPER-207ENST00000563290 DNMBPQ6XZF7 1577 aa8.12□□□□□ -1.11
SCAPER-207ENST00000563290 RRBP1Q9P2E9 1410 aaKnown RBP8.12□□□□□ -1.11
SCAPER-207ENST00000563290 POLA1P09884 1462 aaPredicted RBP8.12□□□□□ -1.11
SCAPER-207ENST00000563290 ERICH3Q5RHP9 1530 aa8.12□□□□□ -1.11
SCAPER-207ENST00000563290 PTPRGP23470 1445 aa8.12□□□□□ -1.11
SCAPER-207ENST00000563290 EIF4G2P78344 907 aaKnown RBP eCLIP8.11□□□□□ -1.11
SCAPER-207ENST00000563290 MAPKBP1O60336 1514 aa8.11□□□□□ -1.11
SCAPER-207ENST00000563290 CCDC18Q5T9S5 1454 aa8.11□□□□□ -1.11
SCAPER-207ENST00000563290 CCER2I3L3R5 266 aa8.11□□□□□ -1.11
SCAPER-207ENST00000563290 ANO8Q9HCE9 1232 aaPredicted RBP8.11□□□□□ -1.11
SCAPER-207ENST00000563290 OSCARQ8IYS5 282 aa8.1□□□□□ -1.11
SCAPER-207ENST00000563290 ERICH6BQ5W0A0 696 aa8.1□□□□□ -1.11
SCAPER-207ENST00000563290 HAP1P54257 671 aaPredicted RBP8.1□□□□□ -1.11
SCAPER-207ENST00000563290 TIMELESSQ9UNS1 1208 aa8.09□□□□□ -1.11
SCAPER-207ENST00000563290 PPP1R15AO75807 674 aaPredicted RBP8.09□□□□□ -1.11
SCAPER-207ENST00000563290 RGL3Q3MIN7 710 aa8.09□□□□□ -1.11
SCAPER-207ENST00000563290 PRXQ9BXM0 1461 aa8.09□□□□□ -1.11
SCAPER-207ENST00000563290 RSPH4AQ5TD94 716 aa8.09□□□□□ -1.11
SCAPER-207ENST00000563290 WDR97A6NE52 1622 aa8.08□□□□□ -1.12
SCAPER-207ENST00000563290 SIN3AQ96ST3 1273 aa8.08□□□□□ -1.12
SCAPER-207ENST00000563290 ARID4BQ4LE39 1312 aaPredicted RBP8.07□□□□□ -1.12
SCAPER-207ENST00000563290 KANK1Q14678 1352 aa8.07□□□□□ -1.12
SCAPER-207ENST00000563290 NEFMP07197 916 aa8.07□□□□□ -1.12
SCAPER-207ENST00000563290 ANKRD30AQ9BXX3 1397 aa8.07□□□□□ -1.12
SCAPER-207ENST00000563290 ABCA10Q8WWZ4 1543 aa8.05□□□□□ -1.12
SCAPER-207ENST00000563290 ARAP1Q96P48 1450 aa8.05□□□□□ -1.12
SCAPER-207ENST00000563290 C14orf37Q86TY3 774 aa8.05□□□□□ -1.12
SCAPER-207ENST00000563290 RAB3GAP2Q9H2M9 1393 aa8.05□□□□□ -1.12
SCAPER-207ENST00000563290 HIRIP3Q9BW71 556 aaPredicted RBP8.05□□□□□ -1.12
SCAPER-207ENST00000563290 SALL2Q9Y467 1007 aaPredicted RBP8.04□□□□□ -1.12
SCAPER-207ENST00000563290 HNRNPMP52272 730 aaKnown RBP eCLIP8.03□□□□□ -1.12
SCAPER-207ENST00000563290 TRHP20396 242 aaPredicted RBP8.03□□□□□ -1.12
SCAPER-207ENST00000563290 CASKIN1Q8WXD9 1431 aa8.03□□□□□ -1.12
SCAPER-207ENST00000563290 PKD2Q13563 968 aa8.03□□□□□ -1.12
SCAPER-207ENST00000563290 CARD11Q9BXL7 1154 aa8.03□□□□□ -1.12
SCAPER-207ENST00000563290 NOP58Q9Y2X3 529 aaKnown RBP8.03□□□□□ -1.12
SCAPER-207ENST00000563290 MPHOSPH9Q99550 1183 aa8.02□□□□□ -1.13
SCAPER-207ENST00000563290 CDCA8Q53HL2 280 aa8.01□□□□□ -1.13
SCAPER-207ENST00000563290 TMC1Q8TDI8 760 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms