RNA–Protein interactions for RNA: ENST00000563290.5

SCAPER-207, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAPER, Length 5,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-207ENST00000563290 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
SCAPER-207ENST00000563290 DCAF8L2P0C7V8 631 aa10.7□□□□□ -0.7
SCAPER-207ENST00000563290 SHROOM4Q9ULL8 1493 aa10.12□□□□□ -0.79
SCAPER-207ENST00000563290 SUPT5HO00267 1087 aaKnown RBP10.08□□□□□ -0.8
SCAPER-207ENST00000563290 HRCP23327 699 aa9.83□□□□□ -0.84
SCAPER-207ENST00000563290 PELP1Q8IZL8 1130 aaKnown RBP9.7□□□□□ -0.86
SCAPER-207ENST00000563290 ABCC9O60706 1549 aa9.61□□□□□ -0.87
SCAPER-207ENST00000563290 PPARGC1BQ86YN6 1023 aaKnown RBP9.55□□□□□ -0.88
SCAPER-207ENST00000563290 CCDC180Q9P1Z9 1646 aa9.53□□□□□ -0.88
SCAPER-207ENST00000563290 MYO15BQ96JP2 1530 aa9.52□□□□□ -0.88
SCAPER-207ENST00000563290 PCGF6Q9BYE7 350 aa9.49□□□□□ -0.89
SCAPER-207ENST00000563290 EHMT2Q96KQ7 1210 aa9.46□□□□□ -0.89
SCAPER-207ENST00000563290 TRIM41Q8WV44 630 aa9.43□□□□□ -0.9
SCAPER-207ENST00000563290 FAM9AQ8IZU1 332 aaPredicted RBP9.42□□□□□ -0.9
SCAPER-207ENST00000563290 DCAF1Q9Y4B6 1507 aa9.4□□□□□ -0.9
SCAPER-207ENST00000563290 ZCCHC6Q5VYS8 1495 aaKnown RBP9.4□□□□□ -0.91
SCAPER-207ENST00000563290 MYT1Q01538 1121 aa9.38□□□□□ -0.91
SCAPER-207ENST00000563290 CHIC1Q5VXU3 224 aa9.36□□□□□ -0.91
SCAPER-207ENST00000563290 PABPN1Q86U42 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCAPER-207ENST00000563290 SCAF1Q9H7N4 1312 aaKnown RBP9.35□□□□□ -0.91
SCAPER-207ENST00000563290 APLP2Q06481 763 aa9.32□□□□□ -0.92
SCAPER-207ENST00000563290 TRIM26Q12899 539 aaPredicted RBP9.23□□□□□ -0.93
SCAPER-207ENST00000563290 ZEB1P37275 1124 aaPredicted RBP9.22□□□□□ -0.93
SCAPER-207ENST00000563290 UBTFP17480 764 aaKnown RBP9.21□□□□□ -0.93
SCAPER-207ENST00000563290 SCRIBQ14160 1630 aa9.21□□□□□ -0.94
SCAPER-207ENST00000563290 SLC24A1O60721 1099 aa9.18□□□□□ -0.94
SCAPER-207ENST00000563290 RANGAP1P46060 587 aaPredicted RBP9.17□□□□□ -0.94
SCAPER-207ENST00000563290 RB1CC1Q8TDY2 1594 aa9.17□□□□□ -0.94
SCAPER-207ENST00000563290 NACADO15069 1562 aa9.15□□□□□ -0.94
SCAPER-207ENST00000563290 TTBK1Q5TCY1 1321 aaPredicted RBP9.1□□□□□ -0.95
SCAPER-207ENST00000563290 ACIN1Q9UKV3 1341 aaKnown RBP9.09□□□□□ -0.95
SCAPER-207ENST00000563290 LOC105371045A0A1W2PR82 267 aa9.09□□□□□ -0.95
SCAPER-207ENST00000563290 ATP1B4Q9UN42 357 aaPredicted RBP9.07□□□□□ -0.96
SCAPER-207ENST00000563290 NEUROD1Q13562 356 aa9.03□□□□□ -0.96
SCAPER-207ENST00000563290 GTF3C3Q9Y5Q9 886 aa8.99□□□□□ -0.97
SCAPER-207ENST00000563290 ERICH6Q7L0X2 663 aa8.98□□□□□ -0.97
SCAPER-207ENST00000563290 CENPBP07199 599 aaPredicted RBP8.94□□□□□ -0.98
SCAPER-207ENST00000563290 RSF1Q96T23 1441 aaPredicted RBP8.93□□□□□ -0.98
SCAPER-207ENST00000563290 CCER1Q8TC90 406 aaPredicted RBP8.91□□□□□ -0.98
SCAPER-207ENST00000563290 CSRNP3Q8WYN3 585 aa8.86□□□□□ -0.99
SCAPER-207ENST00000563290 BAZ1AQ9NRL2 1556 aaPredicted RBP8.85□□□□□ -0.99
SCAPER-207ENST00000563290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.85□□□□□ -0.99
SCAPER-207ENST00000563290 HNRNPUL2Q1KMD3 747 aaKnown RBP8.85□□□□□ -0.99
SCAPER-207ENST00000563290 DIEXFQ68CQ4 756 aaKnown RBP8.85□□□□□ -0.99
SCAPER-207ENST00000563290 CECR2Q9BXF3 1484 aa8.82□□□□□ -1
SCAPER-207ENST00000563290 BAZ1BQ9UIG0 1483 aaKnown RBP8.81□□□□□ -1
SCAPER-207ENST00000563290 ITGAEP38570 1179 aa8.76□□□□□ -1.01
SCAPER-207ENST00000563290 FBLN2P98095 1184 aa8.75□□□□□ -1.01
SCAPER-207ENST00000563290 MROH2BQ7Z745 1585 aa8.73□□□□□ -1.01
SCAPER-207ENST00000563290 MYT1LQ9UL68 1186 aa8.69□□□□□ -1.02
SCAPER-207ENST00000563290 BCL11AQ9H165 835 aa8.69□□□□□ -1.02
SCAPER-207ENST00000563290 WRNQ14191 1432 aaPredicted RBP eCLIP8.68□□□□□ -1.02
SCAPER-207ENST00000563290 SMARCA2P51531 1590 aa8.68□□□□□ -1.02
SCAPER-207ENST00000563290 ZNF316A6NFI3 1004 aaPredicted RBP8.67□□□□□ -1.02
SCAPER-207ENST00000563290 EEA1Q15075 1411 aa8.67□□□□□ -1.02
SCAPER-207ENST00000563290 P3H3Q8IVL6 736 aa8.66□□□□□ -1.02
SCAPER-207ENST00000563290 FAM50AQ14320 339 aaKnown RBP8.66□□□□□ -1.02
SCAPER-207ENST00000563290 YTHDC1Q96MU7 727 aaKnown RBP8.65□□□□□ -1.02
SCAPER-207ENST00000563290 ANP32EQ9BTT0 268 aa8.64□□□□□ -1.03
SCAPER-207ENST00000563290 CCDC88BA6NC98 1476 aa8.63□□□□□ -1.03
SCAPER-207ENST00000563290 CLSPNQ9HAW4 1339 aa8.62□□□□□ -1.03
SCAPER-207ENST00000563290 TOP2AP11388 1531 aaKnown RBP8.6□□□□□ -1.03
SCAPER-207ENST00000563290 MIER1Q8N108 512 aa8.6□□□□□ -1.03
SCAPER-207ENST00000563290 WIZO95785 1651 aa8.6□□□□□ -1.03
SCAPER-207ENST00000563290 CDK11AQ9UQ88 783 aaPredicted RBP8.59□□□□□ -1.03
SCAPER-207ENST00000563290 SMARCA4P51532 1647 aa8.59□□□□□ -1.03
SCAPER-207ENST00000563290 KIF27Q86VH2 1401 aa8.59□□□□□ -1.03
SCAPER-207ENST00000563290 ATAD2BQ9ULI0 1458 aa8.58□□□□□ -1.04
SCAPER-207ENST00000563290 CHMP7Q8WUX9 453 aaPredicted RBP8.57□□□□□ -1.04
SCAPER-207ENST00000563290 GOLGA3Q08378 1498 aa8.56□□□□□ -1.04
SCAPER-207ENST00000563290 SUPT16HQ9Y5B9 1047 aaKnown RBP8.56□□□□□ -1.04
SCAPER-207ENST00000563290 TSHZ2Q9NRE2 1034 aa8.56□□□□□ -1.04
SCAPER-207ENST00000563290 ARID3CA6NKF2 412 aa8.55□□□□□ -1.04
SCAPER-207ENST00000563290 TRIM52Q96A61 297 aa8.55□□□□□ -1.04
SCAPER-207ENST00000563290 CLIP1P30622 1438 aa8.55□□□□□ -1.04
SCAPER-207ENST00000563290 ERCC6Q03468 1493 aa8.54□□□□□ -1.04
SCAPER-207ENST00000563290 CEP164Q9UPV0 1460 aa8.53□□□□□ -1.04
SCAPER-207ENST00000563290 PDS5BQ9NTI5 1447 aa8.52□□□□□ -1.05
SCAPER-207ENST00000563290 TNIKQ9UKE5 1360 aa8.51□□□□□ -1.05
SCAPER-207ENST00000563290 CADPSQ9ULU8 1353 aa8.51□□□□□ -1.05
SCAPER-207ENST00000563290 CEP162Q5TB80 1403 aa8.5□□□□□ -1.05
SCAPER-207ENST00000563290 EIF4G1Q04637 1599 aaKnown RBP8.48□□□□□ -1.05
SCAPER-207ENST00000563290 CUX2O14529 1486 aa8.48□□□□□ -1.05
SCAPER-207ENST00000563290 ABCC8Q09428 1581 aa8.47□□□□□ -1.05
SCAPER-207ENST00000563290 ZNF777Q9ULD5 760 aaPredicted RBP8.47□□□□□ -1.05
SCAPER-207ENST00000563290 SOGA1O94964 1423 aa8.47□□□□□ -1.05
SCAPER-207ENST00000563290 NPM1P06748 294 aaKnown RBP eCLIP8.47□□□□□ -1.05
SCAPER-207ENST00000563290 CARMIL1Q5VZK9 1371 aa8.46□□□□□ -1.06
SCAPER-207ENST00000563290 NCAPD3P42695 1498 aa8.45□□□□□ -1.06
SCAPER-207ENST00000563290 MTUS2Q5JR59 1369 aa8.45□□□□□ -1.06
SCAPER-207ENST00000563290 POLR3GLQ9BT43 218 aa8.44□□□□□ -1.06
SCAPER-207ENST00000563290 EIF5BO60841 1220 aaKnown RBP8.44□□□□□ -1.06
SCAPER-207ENST00000563290 PRKCSHP14314 528 aaPredicted RBP8.41□□□□□ -1.06
SCAPER-207ENST00000563290 PLEKHD1A6NEE1 506 aa8.38□□□□□ -1.07
SCAPER-207ENST00000563290 FANCD2Q9BXW9 1451 aa8.38□□□□□ -1.07
SCAPER-207ENST00000563290 TDRD9Q8NDG6 1382 aaKnown RBP8.38□□□□□ -1.07
SCAPER-207ENST00000563290 NEFLP07196 543 aa8.37□□□□□ -1.07
SCAPER-207ENST00000563290 TSPY4P0CV99 314 aa8.36□□□□□ -1.07
SCAPER-207ENST00000563290 TSPY10P0CW01 314 aa8.36□□□□□ -1.07
SCAPER-207ENST00000563290 FHAD1B1AJZ9 1412 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms