RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 IGF1RP08069 1367 aa25.67■■□□□ 1.7
SPG7-205ENST00000561945 KIF27Q86VH2 1401 aa25.65■■□□□ 1.7
SPG7-205ENST00000561945 KIF13AQ9H1H9 1805 aa25.63■■□□□ 1.69
SPG7-205ENST00000561945 KIAA0586Q9BVV6 1533 aa25.63■■□□□ 1.69
SPG7-205ENST00000561945 MAPKBP1O60336 1514 aa25.54■■□□□ 1.68
SPG7-205ENST00000561945 ADCY10Q96PN6 1610 aa25.52■■□□□ 1.68
SPG7-205ENST00000561945 ABCC10Q5T3U5 1492 aa25.47■■□□□ 1.67
SPG7-205ENST00000561945 CARMIL1Q5VZK9 1371 aa25.45■■□□□ 1.67
SPG7-205ENST00000561945 DIP2BQ9P265 1576 aa25.43■■□□□ 1.66
SPG7-205ENST00000561945 NPM1P06748 294 aaKnown RBP eCLIP25.38■■□□□ 1.65
SPG7-205ENST00000561945 IQGAP2Q13576 1575 aa25.36■■□□□ 1.65
SPG7-205ENST00000561945 PTPRGP23470 1445 aa25.32■■□□□ 1.64
SPG7-205ENST00000561945 FAM69CQ0P6D2 419 aa25.32■■□□□ 1.64
SPG7-205ENST00000561945 CARMIL2Q6F5E8 1435 aa25.31■■□□□ 1.64
SPG7-205ENST00000561945 TNIKQ9UKE5 1360 aa25.31■■□□□ 1.64
SPG7-205ENST00000561945 AEBP2Q6ZN18 517 aaPredicted RBP25.27■■□□□ 1.64
SPG7-205ENST00000561945 ABCC2Q92887 1545 aa25.27■■□□□ 1.64
SPG7-205ENST00000561945 DISP1Q96F81 1524 aa25.27■■□□□ 1.64
SPG7-205ENST00000561945 UHRF1BP1LA0JNW5 1464 aa25.26■■□□□ 1.63
SPG7-205ENST00000561945 RAPGEF2Q9Y4G8 1499 aa25.26■■□□□ 1.63
SPG7-205ENST00000561945 UGGT2Q9NYU1 1516 aa25.24■■□□□ 1.63
SPG7-205ENST00000561945 GLI2P10070 1586 aa25.18■■□□□ 1.62
SPG7-205ENST00000561945 UACAQ9BZF9 1416 aa25.17■■□□□ 1.62
SPG7-205ENST00000561945 KDM6BO15054 1643 aa25.16■■□□□ 1.62
SPG7-205ENST00000561945 PLB1Q6P1J6 1458 aa25.15■■□□□ 1.62
SPG7-205ENST00000561945 KIAA0556O60303 1618 aa25.15■■□□□ 1.62
SPG7-205ENST00000561945 TSPOAP1O95153 1857 aa25.15■■□□□ 1.62
SPG7-205ENST00000561945 ASXL2Q76L83 1435 aa25.13■■□□□ 1.61
SPG7-205ENST00000561945 KDM5BQ9UGL1 1544 aa25.13■■□□□ 1.61
SPG7-205ENST00000561945 CTTNBP2Q8WZ74 1663 aa25.12■■□□□ 1.61
SPG7-205ENST00000561945 PPRC1Q5VV67 1664 aaKnown RBP25.11■■□□□ 1.61
SPG7-205ENST00000561945 ZCCHC11Q5TAX3 1644 aaKnown RBP25.05■■□□□ 1.6
SPG7-205ENST00000561945 PRXQ9BXM0 1461 aa25.04■■□□□ 1.6
SPG7-205ENST00000561945 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
SPG7-205ENST00000561945 MAP3K4Q9Y6R4 1608 aa25.03■■□□□ 1.6
SPG7-205ENST00000561945 EPRSP07814 1512 aaKnown RBP25.02■■□□□ 1.6
SPG7-205ENST00000561945 GOLGA3Q08378 1498 aa24.99■■□□□ 1.59
SPG7-205ENST00000561945 ABCA8O94911 1581 aa24.95■■□□□ 1.58
SPG7-205ENST00000561945 WDR7Q9Y4E6 1490 aa24.91■■□□□ 1.58
SPG7-205ENST00000561945 KDM4FA0A1W2PPD8 638 aa24.9■■□□□ 1.58
SPG7-205ENST00000561945 TEX14Q8IWB6 1497 aa24.89■■□□□ 1.58
SPG7-205ENST00000561945 COL17A1Q9UMD9 1497 aaPredicted RBP24.88■■□□□ 1.57
SPG7-205ENST00000561945 CFAP43Q8NDM7 1665 aa24.83■■□□□ 1.57
SPG7-205ENST00000561945 MAGI3Q5TCQ9 1506 aa24.8■■□□□ 1.56
SPG7-205ENST00000561945 SAMD9Q5K651 1589 aa24.78■■□□□ 1.56
SPG7-205ENST00000561945 CSRNP3Q8WYN3 585 aa24.72■■□□□ 1.55
SPG7-205ENST00000561945 CD109Q6YHK3 1445 aa24.71■■□□□ 1.55
SPG7-205ENST00000561945 ADGRL1O94910 1474 aa24.7■■□□□ 1.55
SPG7-205ENST00000561945 EEA1Q15075 1411 aa24.7■■□□□ 1.55
SPG7-205ENST00000561945 ATP10BO94823 1461 aa24.68■■□□□ 1.54
SPG7-205ENST00000561945 ABCA9Q8IUA7 1624 aa24.64■■□□□ 1.53
SPG7-205ENST00000561945 RAPGEF6Q8TEU7 1601 aa24.64■■□□□ 1.53
SPG7-205ENST00000561945 ARAP3Q8WWN8 1544 aa24.61■■□□□ 1.53
SPG7-205ENST00000561945 FAM9AQ8IZU1 332 aaPredicted RBP24.61■■□□□ 1.53
SPG7-205ENST00000561945 KCNH8Q96L42 1107 aa24.61■■□□□ 1.53
SPG7-205ENST00000561945 P3H3Q8IVL6 736 aa24.57■■□□□ 1.52
SPG7-205ENST00000561945 PHLDB1Q86UU1 1377 aa24.54■■□□□ 1.52
SPG7-205ENST00000561945 KIF21BO75037 1637 aa24.54■■□□□ 1.52
SPG7-205ENST00000561945 NUP153P49790 1475 aaKnown RBP24.54■■□□□ 1.52
SPG7-205ENST00000561945 EFCAB5A4FU69 1503 aa24.5■■□□□ 1.51
SPG7-205ENST00000561945 NEO1Q92859 1461 aa24.48■■□□□ 1.51
SPG7-205ENST00000561945 FHOD3Q2V2M9 1422 aa24.46■■□□□ 1.51
SPG7-205ENST00000561945 ARID3CA6NKF2 412 aa24.46■■□□□ 1.51
SPG7-205ENST00000561945 FRMPD1Q5SYB0 1578 aa24.4■■□□□ 1.5
SPG7-205ENST00000561945 HECW2Q9P2P5 1572 aa24.4■■□□□ 1.5
SPG7-205ENST00000561945 ADAMTSL3P82987 1691 aa24.34■■□□□ 1.49
SPG7-205ENST00000561945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.33■■□□□ 1.49
SPG7-205ENST00000561945 PLEKHD1A6NEE1 506 aa24.32■■□□□ 1.48
SPG7-205ENST00000561945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.32■■□□□ 1.48
SPG7-205ENST00000561945 HNRNPUL2Q1KMD3 747 aaKnown RBP24.32■■□□□ 1.48
SPG7-205ENST00000561945 CFAP74Q9C0B2 1584 aa24.32■■□□□ 1.48
SPG7-205ENST00000561945 RICTORQ6R327 1708 aa24.32■■□□□ 1.48
SPG7-205ENST00000561945 ILDR1Q86SU0 546 aaPredicted RBP24.31■■□□□ 1.48
SPG7-205ENST00000561945 RAPGEF3O95398 923 aa24.3■■□□□ 1.48
SPG7-205ENST00000561945 RANGAP1P46060 587 aaPredicted RBP24.29■■□□□ 1.48
SPG7-205ENST00000561945 TTC37Q6PGP7 1564 aa24.29■■□□□ 1.48
SPG7-205ENST00000561945 BCORL1Q5H9F3 1711 aa24.27■■□□□ 1.48
SPG7-205ENST00000561945 AKNAQ7Z591 1439 aa24.26■■□□□ 1.47
SPG7-205ENST00000561945 FANCAO15360 1455 aa24.26■■□□□ 1.47
SPG7-205ENST00000561945 ARHGEF40Q8TER5 1519 aa24.25■■□□□ 1.47
SPG7-205ENST00000561945 DENND4BO75064 1496 aaPredicted RBP24.24■■□□□ 1.47
SPG7-205ENST00000561945 CDK13Q14004 1512 aaKnown RBP24.24■■□□□ 1.47
SPG7-205ENST00000561945 ZMYM4Q5VZL5 1548 aa24.24■■□□□ 1.47
SPG7-205ENST00000561945 FMN1Q68DA7 1419 aa24.23■■□□□ 1.47
SPG7-205ENST00000561945 ARHGAP35Q9NRY4 1499 aa24.23■■□□□ 1.47
SPG7-205ENST00000561945 HECW1Q76N89 1606 aa24.22■■□□□ 1.47
SPG7-205ENST00000561945 PTPRMP28827 1452 aa24.22■■□□□ 1.47
SPG7-205ENST00000561945 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
SPG7-205ENST00000561945 PLCH2O75038 1416 aa24.17■■□□□ 1.46
SPG7-205ENST00000561945 MADDQ8WXG6 1647 aa24.17■■□□□ 1.46
SPG7-205ENST00000561945 MAGI2Q86UL8 1455 aa24.16■■□□□ 1.46
SPG7-205ENST00000561945 UBTFP17480 764 aaKnown RBP24.14■■□□□ 1.45
SPG7-205ENST00000561945 MYO5CQ9NQX4 1742 aa24.13■■□□□ 1.45
SPG7-205ENST00000561945 LRRIQ1Q96JM4 1722 aa24.12■■□□□ 1.45
SPG7-205ENST00000561945 ZFYVE16Q7Z3T8 1539 aa24.11■■□□□ 1.45
SPG7-205ENST00000561945 SIGLEC1Q9BZZ2 1709 aa24.11■■□□□ 1.45
SPG7-205ENST00000561945 POGZQ7Z3K3 1410 aa24.1■■□□□ 1.45
SPG7-205ENST00000561945 KIF14Q15058 1648 aa24.08■■□□□ 1.45
SPG7-205ENST00000561945 YEATS2Q9ULM3 1422 aa24.07■■□□□ 1.44
SPG7-205ENST00000561945 RIMS1Q86UR5 1692 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms