RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 KDM6BO15054 1643 aa12.66□□□□□ -0.38
TPM1-231ENST00000561395 ABCA10Q8WWZ4 1543 aa12.65□□□□□ -0.38
TPM1-231ENST00000561395 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
TPM1-231ENST00000561395 NUP160Q12769 1436 aa12.64□□□□□ -0.39
TPM1-231ENST00000561395 KDM4FA0A1W2PPD8 638 aa12.61□□□□□ -0.39
TPM1-231ENST00000561395 ABCC10Q5T3U5 1492 aa12.6□□□□□ -0.39
TPM1-231ENST00000561395 MAPKBP1O60336 1514 aa12.6□□□□□ -0.39
TPM1-231ENST00000561395 ADCY10Q96PN6 1610 aa12.57□□□□□ -0.4
TPM1-231ENST00000561395 FAM69CQ0P6D2 419 aa12.55□□□□□ -0.4
TPM1-231ENST00000561395 PRG4Q92954 1404 aaPredicted RBP12.54□□□□□ -0.4
TPM1-231ENST00000561395 RUSC2Q8N2Y8 1516 aa12.53□□□□□ -0.4
TPM1-231ENST00000561395 FHAD1B1AJZ9 1412 aa12.53□□□□□ -0.4
TPM1-231ENST00000561395 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
TPM1-231ENST00000561395 ERICH3Q5RHP9 1530 aa12.51□□□□□ -0.41
TPM1-231ENST00000561395 HECW2Q9P2P5 1572 aa12.51□□□□□ -0.41
TPM1-231ENST00000561395 PPRC1Q5VV67 1664 aaKnown RBP12.49□□□□□ -0.41
TPM1-231ENST00000561395 WRNQ14191 1432 aaPredicted RBP eCLIP12.49□□□□□ -0.41
TPM1-231ENST00000561395 ADGRL1O94910 1474 aa12.48□□□□□ -0.41
TPM1-231ENST00000561395 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.41
TPM1-231ENST00000561395 TOP2BQ02880 1626 aa12.46□□□□□ -0.41
TPM1-231ENST00000561395 PIAS4Q8N2W9 510 aaPredicted RBP12.45□□□□□ -0.42
TPM1-231ENST00000561395 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
TPM1-231ENST00000561395 CUL7Q14999 1698 aa12.4□□□□□ -0.42
TPM1-231ENST00000561395 GLI2P10070 1586 aa12.37□□□□□ -0.43
TPM1-231ENST00000561395 MAP3K4Q9Y6R4 1608 aa12.35□□□□□ -0.43
TPM1-231ENST00000561395 EEA1Q15075 1411 aa12.32□□□□□ -0.44
TPM1-231ENST00000561395 ABCC2Q92887 1545 aa12.31□□□□□ -0.44
TPM1-231ENST00000561395 KIAA0586Q9BVV6 1533 aa12.31□□□□□ -0.44
TPM1-231ENST00000561395 ASXL2Q76L83 1435 aa12.29□□□□□ -0.44
TPM1-231ENST00000561395 PLB1Q6P1J6 1458 aa12.29□□□□□ -0.44
TPM1-231ENST00000561395 COL17A1Q9UMD9 1497 aaPredicted RBP12.29□□□□□ -0.44
TPM1-231ENST00000561395 FAM9AQ8IZU1 332 aaPredicted RBP12.29□□□□□ -0.44
TPM1-231ENST00000561395 FBXO41Q8TF61 875 aa12.27□□□□□ -0.45
TPM1-231ENST00000561395 TEX14Q8IWB6 1497 aa12.26□□□□□ -0.45
TPM1-231ENST00000561395 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
TPM1-231ENST00000561395 PTPRGP23470 1445 aa12.25□□□□□ -0.45
TPM1-231ENST00000561395 KIF21BO75037 1637 aa12.25□□□□□ -0.45
TPM1-231ENST00000561395 ZCCHC11Q5TAX3 1644 aaKnown RBP12.25□□□□□ -0.45
TPM1-231ENST00000561395 EPRSP07814 1512 aaKnown RBP12.23□□□□□ -0.45
TPM1-231ENST00000561395 UHRF1BP1LA0JNW5 1464 aa12.22□□□□□ -0.45
TPM1-231ENST00000561395 TTBK1Q5TCY1 1321 aaPredicted RBP12.21□□□□□ -0.45
TPM1-231ENST00000561395 TNIKQ9UKE5 1360 aa12.2□□□□□ -0.46
TPM1-231ENST00000561395 IQGAP2Q13576 1575 aa12.2□□□□□ -0.46
TPM1-231ENST00000561395 CFAP43Q8NDM7 1665 aa12.19□□□□□ -0.46
TPM1-231ENST00000561395 CARMIL2Q6F5E8 1435 aa12.19□□□□□ -0.46
TPM1-231ENST00000561395 KDM5BQ9UGL1 1544 aa12.18□□□□□ -0.46
TPM1-231ENST00000561395 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
TPM1-231ENST00000561395 KIF27Q86VH2 1401 aa12.17□□□□□ -0.46
TPM1-231ENST00000561395 UACAQ9BZF9 1416 aa12.16□□□□□ -0.46
TPM1-231ENST00000561395 GOLGA3Q08378 1498 aa12.14□□□□□ -0.47
TPM1-231ENST00000561395 LMTK3Q96Q04 1460 aa12.14□□□□□ -0.47
TPM1-231ENST00000561395 ADAMTSL3P82987 1691 aa12.14□□□□□ -0.47
TPM1-231ENST00000561395 DISP1Q96F81 1524 aa12.13□□□□□ -0.47
TPM1-231ENST00000561395 IGF1RP08069 1367 aa12.13□□□□□ -0.47
TPM1-231ENST00000561395 WDR7Q9Y4E6 1490 aa12.12□□□□□ -0.47
TPM1-231ENST00000561395 KIAA0556O60303 1618 aa12.11□□□□□ -0.47
TPM1-231ENST00000561395 PRXQ9BXM0 1461 aa12.1□□□□□ -0.47
TPM1-231ENST00000561395 MAGI3Q5TCQ9 1506 aa12.1□□□□□ -0.47
TPM1-231ENST00000561395 PCF11O94913 1555 aaKnown RBP12.09□□□□□ -0.47
TPM1-231ENST00000561395 EHMT2Q96KQ7 1210 aa12.09□□□□□ -0.47
TPM1-231ENST00000561395 BCORL1Q5H9F3 1711 aa12.08□□□□□ -0.47
TPM1-231ENST00000561395 PTPRMP28827 1452 aa12.08□□□□□ -0.47
TPM1-231ENST00000561395 RAPGEF2Q9Y4G8 1499 aa12.08□□□□□ -0.47
TPM1-231ENST00000561395 MADDQ8WXG6 1647 aa12.07□□□□□ -0.48
TPM1-231ENST00000561395 UGGT2Q9NYU1 1516 aa12.06□□□□□ -0.48
TPM1-231ENST00000561395 CARMIL1Q5VZK9 1371 aa12.05□□□□□ -0.48
TPM1-231ENST00000561395 CD109Q6YHK3 1445 aa12.05□□□□□ -0.48
TPM1-231ENST00000561395 CTTNBP2Q8WZ74 1663 aa12.05□□□□□ -0.48
TPM1-231ENST00000561395 RIMS1Q86UR5 1692 aaKnown RBP12.04□□□□□ -0.48
TPM1-231ENST00000561395 CEP162Q5TB80 1403 aa12.03□□□□□ -0.48
TPM1-231ENST00000561395 ARAP3Q8WWN8 1544 aa12.02□□□□□ -0.48
TPM1-231ENST00000561395 UBTFP17480 764 aaKnown RBP12□□□□□ -0.49
TPM1-231ENST00000561395 ABCA8O94911 1581 aa12□□□□□ -0.49
TPM1-231ENST00000561395 FRMPD1Q5SYB0 1578 aa11.98□□□□□ -0.49
TPM1-231ENST00000561395 MSH5O43196 834 aa11.98□□□□□ -0.49
TPM1-231ENST00000561395 SOCS7O14512 581 aa11.97□□□□□ -0.49
TPM1-231ENST00000561395 ABCA9Q8IUA7 1624 aa11.97□□□□□ -0.49
TPM1-231ENST00000561395 SPATA31D1Q6ZQQ2 1576 aa11.96□□□□□ -0.49
TPM1-231ENST00000561395 DISP3Q9P2K9 1392 aa11.96□□□□□ -0.49
TPM1-231ENST00000561395 ILDR2Q71H61 639 aa11.96□□□□□ -0.49
TPM1-231ENST00000561395 KCNH8Q96L42 1107 aa11.95□□□□□ -0.5
TPM1-231ENST00000561395 ARHGEF40Q8TER5 1519 aa11.94□□□□□ -0.5
TPM1-231ENST00000561395 FER1L4A9Z1Z3 1794 aa11.93□□□□□ -0.5
TPM1-231ENST00000561395 RICTORQ6R327 1708 aa11.93□□□□□ -0.5
TPM1-231ENST00000561395 CLIP1P30622 1438 aa11.93□□□□□ -0.5
TPM1-231ENST00000561395 CERKQ8TCT0 537 aa11.91□□□□□ -0.5
TPM1-231ENST00000561395 SIGLEC1Q9BZZ2 1709 aa11.91□□□□□ -0.5
TPM1-231ENST00000561395 PREX1Q8TCU6 1659 aa11.9□□□□□ -0.5
TPM1-231ENST00000561395 HSPA2P54652 639 aa11.89□□□□□ -0.51
TPM1-231ENST00000561395 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
TPM1-231ENST00000561395 NEO1Q92859 1461 aa11.89□□□□□ -0.51
TPM1-231ENST00000561395 PHLDB1Q86UU1 1377 aa11.88□□□□□ -0.51
TPM1-231ENST00000561395 ARID4BQ4LE39 1312 aaPredicted RBP11.87□□□□□ -0.51
TPM1-231ENST00000561395 RAPGEF3O95398 923 aa11.87□□□□□ -0.51
TPM1-231ENST00000561395 STRCQ7RTU9 1775 aa11.87□□□□□ -0.51
TPM1-231ENST00000561395 TTC37Q6PGP7 1564 aa11.86□□□□□ -0.51
TPM1-231ENST00000561395 CFAP74Q9C0B2 1584 aa11.84□□□□□ -0.51
TPM1-231ENST00000561395 KCNA4P22459 653 aa11.84□□□□□ -0.51
TPM1-231ENST00000561395 VPS8Q8N3P4 1428 aa11.84□□□□□ -0.51
TPM1-231ENST00000561395 FANCAO15360 1455 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms