RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 ABCA8O94911 1581 aa9.32□□□□□ -0.92
ZEB1-219ENST00000560721 SNAPC4Q5SXM2 1469 aa9.32□□□□□ -0.92
ZEB1-219ENST00000560721 GLI2P10070 1586 aa9.32□□□□□ -0.92
ZEB1-219ENST00000560721 TNIKQ9UKE5 1360 aa9.3□□□□□ -0.92
ZEB1-219ENST00000560721 ZNF608Q9ULD9 1512 aaPredicted RBP9.29□□□□□ -0.92
ZEB1-219ENST00000560721 RAD54L2Q9Y4B4 1467 aa9.29□□□□□ -0.92
ZEB1-219ENST00000560721 MAPKBP1O60336 1514 aa9.28□□□□□ -0.92
ZEB1-219ENST00000560721 BCORL1Q5H9F3 1711 aa9.25□□□□□ -0.93
ZEB1-219ENST00000560721 DISP1Q96F81 1524 aa9.25□□□□□ -0.93
ZEB1-219ENST00000560721 ARHGEF11O15085 1522 aa9.24□□□□□ -0.93
ZEB1-219ENST00000560721 HECW1Q76N89 1606 aa9.24□□□□□ -0.93
ZEB1-219ENST00000560721 FYCO1Q9BQS8 1478 aa9.23□□□□□ -0.93
ZEB1-219ENST00000560721 CFAP74Q9C0B2 1584 aa9.23□□□□□ -0.93
ZEB1-219ENST00000560721 CCDC18Q5T9S5 1454 aa9.22□□□□□ -0.93
ZEB1-219ENST00000560721 LRRIQ1Q96JM4 1722 aa9.22□□□□□ -0.93
ZEB1-219ENST00000560721 RAPGEF6Q8TEU7 1601 aa9.22□□□□□ -0.93
ZEB1-219ENST00000560721 CHIC1Q5VXU3 224 aa9.21□□□□□ -0.94
ZEB1-219ENST00000560721 CARMIL1Q5VZK9 1371 aa9.21□□□□□ -0.94
ZEB1-219ENST00000560721 FAM135AQ9P2D6 1515 aa9.2□□□□□ -0.94
ZEB1-219ENST00000560721 ABCC2Q92887 1545 aa9.19□□□□□ -0.94
ZEB1-219ENST00000560721 WDR7Q9Y4E6 1490 aa9.18□□□□□ -0.94
ZEB1-219ENST00000560721 RIMBP3CA6NJZ7 1639 aa9.17□□□□□ -0.94
ZEB1-219ENST00000560721 RIMBP3BA6NNM3 1639 aa9.17□□□□□ -0.94
ZEB1-219ENST00000560721 RIMBP3Q9UFD9 1639 aa9.17□□□□□ -0.94
ZEB1-219ENST00000560721 MAP3K4Q9Y6R4 1608 aa9.17□□□□□ -0.94
ZEB1-219ENST00000560721 ABCA9Q8IUA7 1624 aa9.16□□□□□ -0.94
ZEB1-219ENST00000560721 ITSN2Q9NZM3 1697 aa9.16□□□□□ -0.94
ZEB1-219ENST00000560721 CASKIN1Q8WXD9 1431 aa9.15□□□□□ -0.94
ZEB1-219ENST00000560721 REREQ9P2R6 1566 aa9.15□□□□□ -0.95
ZEB1-219ENST00000560721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.14□□□□□ -0.95
ZEB1-219ENST00000560721 MAST1Q9Y2H9 1570 aa9.14□□□□□ -0.95
ZEB1-219ENST00000560721 FMN1Q68DA7 1419 aa9.13□□□□□ -0.95
ZEB1-219ENST00000560721 ARAP1Q96P48 1450 aa9.12□□□□□ -0.95
ZEB1-219ENST00000560721 ARHGAP35Q9NRY4 1499 aa9.11□□□□□ -0.95
ZEB1-219ENST00000560721 SUPT5HO00267 1087 aaKnown RBP9.11□□□□□ -0.95
ZEB1-219ENST00000560721 ZCCHC11Q5TAX3 1644 aaKnown RBP9.11□□□□□ -0.95
ZEB1-219ENST00000560721 EHBP1L1Q8N3D4 1523 aa9.11□□□□□ -0.95
ZEB1-219ENST00000560721 CROCC2H7BZ55 1655 aa9.11□□□□□ -0.95
ZEB1-219ENST00000560721 CARMIL2Q6F5E8 1435 aa9.11□□□□□ -0.95
ZEB1-219ENST00000560721 CSRNP3Q8WYN3 585 aa9.09□□□□□ -0.95
ZEB1-219ENST00000560721 TIAM1Q13009 1591 aa9.09□□□□□ -0.95
ZEB1-219ENST00000560721 PREX2Q70Z35 1606 aa9.09□□□□□ -0.95
ZEB1-219ENST00000560721 PHLDB1Q86UU1 1377 aa9.08□□□□□ -0.96
ZEB1-219ENST00000560721 ARHGEF5Q12774 1597 aa9.08□□□□□ -0.96
ZEB1-219ENST00000560721 PPRC1Q5VV67 1664 aaKnown RBP9.06□□□□□ -0.96
ZEB1-219ENST00000560721 PCF11O94913 1555 aaKnown RBP9.06□□□□□ -0.96
ZEB1-219ENST00000560721 TCOF1Q13428 1488 aaKnown RBP9.06□□□□□ -0.96
ZEB1-219ENST00000560721 ZMYM4Q5VZL5 1548 aa9.06□□□□□ -0.96
ZEB1-219ENST00000560721 KIF13AQ9H1H9 1805 aa9.06□□□□□ -0.96
ZEB1-219ENST00000560721 SUPT6HQ7KZ85 1726 aaKnown RBP9.05□□□□□ -0.96
ZEB1-219ENST00000560721 VPS8Q8N3P4 1428 aa9.05□□□□□ -0.96
ZEB1-219ENST00000560721 MYO5CQ9NQX4 1742 aa9.04□□□□□ -0.96
ZEB1-219ENST00000560721 MAGI3Q5TCQ9 1506 aa9.04□□□□□ -0.96
ZEB1-219ENST00000560721 EIF2AK4Q9P2K8 1649 aaKnown RBP9.03□□□□□ -0.96
ZEB1-219ENST00000560721 TDRD9Q8NDG6 1382 aaKnown RBP9.02□□□□□ -0.96
ZEB1-219ENST00000560721 ADGBQ8N7X0 1667 aa9.02□□□□□ -0.96
ZEB1-219ENST00000560721 CEP162Q5TB80 1403 aa9.02□□□□□ -0.97
ZEB1-219ENST00000560721 ACIN1Q9UKV3 1341 aaKnown RBP9.02□□□□□ -0.97
ZEB1-219ENST00000560721 AKNAQ7Z591 1439 aa9.02□□□□□ -0.97
ZEB1-219ENST00000560721 PLXNC1O60486 1568 aa9.02□□□□□ -0.97
ZEB1-219ENST00000560721 DIP2BQ9P265 1576 aa9.02□□□□□ -0.97
ZEB1-219ENST00000560721 NEURL4Q96JN8 1562 aa9.01□□□□□ -0.97
ZEB1-219ENST00000560721 TRIM41Q8WV44 630 aa9.01□□□□□ -0.97
ZEB1-219ENST00000560721 CDC42BPAQ5VT25 1732 aa9.01□□□□□ -0.97
ZEB1-219ENST00000560721 PLB1Q6P1J6 1458 aa9.01□□□□□ -0.97
ZEB1-219ENST00000560721 SHANK2Q9UPX8 1470 aa9.01□□□□□ -0.97
ZEB1-219ENST00000560721 ABCC10Q5T3U5 1492 aa9□□□□□ -0.97
ZEB1-219ENST00000560721 KIF14Q15058 1648 aa9□□□□□ -0.97
ZEB1-219ENST00000560721 UACAQ9BZF9 1416 aa9□□□□□ -0.97
ZEB1-219ENST00000560721 NUP153P49790 1475 aaKnown RBP9□□□□□ -0.97
ZEB1-219ENST00000560721 KDM5CP41229 1560 aa8.98□□□□□ -0.97
ZEB1-219ENST00000560721 MIA2Q96PC5 1412 aa8.97□□□□□ -0.97
ZEB1-219ENST00000560721 EPRSP07814 1512 aaKnown RBP8.97□□□□□ -0.97
ZEB1-219ENST00000560721 GCC2Q8IWJ2 1684 aa8.97□□□□□ -0.97
ZEB1-219ENST00000560721 NEO1Q92859 1461 aa8.96□□□□□ -0.97
ZEB1-219ENST00000560721 CDC42BPBQ9Y5S2 1711 aa8.96□□□□□ -0.97
ZEB1-219ENST00000560721 KDM5AP29375 1690 aaKnown RBP8.96□□□□□ -0.98
ZEB1-219ENST00000560721 PLEKHH2Q8IVE3 1493 aa8.96□□□□□ -0.98
ZEB1-219ENST00000560721 DEPDC5O75140 1603 aa8.95□□□□□ -0.98
ZEB1-219ENST00000560721 RICTORQ6R327 1708 aa8.95□□□□□ -0.98
ZEB1-219ENST00000560721 ZC3H13Q5T200 1668 aaKnown RBP8.95□□□□□ -0.98
ZEB1-219ENST00000560721 PRG4Q92954 1404 aaPredicted RBP8.94□□□□□ -0.98
ZEB1-219ENST00000560721 ERCC6L2Q5T890 1561 aa8.94□□□□□ -0.98
ZEB1-219ENST00000560721 INO80Q9ULG1 1556 aaPredicted RBP8.94□□□□□ -0.98
ZEB1-219ENST00000560721 CLIP1P30622 1438 aa8.93□□□□□ -0.98
ZEB1-219ENST00000560721 MROH2AA6NES4 1674 aa8.93□□□□□ -0.98
ZEB1-219ENST00000560721 ADGRL2O95490 1459 aa8.93□□□□□ -0.98
ZEB1-219ENST00000560721 KIAA1107Q9UPP5 1409 aa8.93□□□□□ -0.98
ZEB1-219ENST00000560721 DNMT1P26358 1616 aaKnown RBP8.93□□□□□ -0.98
ZEB1-219ENST00000560721 RNF17Q9BXT8 1623 aaKnown RBP8.92□□□□□ -0.98
ZEB1-219ENST00000560721 KDM5DQ9BY66 1539 aa8.92□□□□□ -0.98
ZEB1-219ENST00000560721 MAGI2Q86UL8 1455 aa8.92□□□□□ -0.98
ZEB1-219ENST00000560721 PTPN23Q9H3S7 1636 aa8.91□□□□□ -0.98
ZEB1-219ENST00000560721 LRRC9Q6ZRR7 1453 aa8.91□□□□□ -0.98
ZEB1-219ENST00000560721 TROQ12816 1431 aaPredicted RBP8.9□□□□□ -0.98
ZEB1-219ENST00000560721 RRBP1Q9P2E9 1410 aaKnown RBP8.9□□□□□ -0.98
ZEB1-219ENST00000560721 ATP10BO94823 1461 aa8.9□□□□□ -0.98
ZEB1-219ENST00000560721 ABCC1P33527 1531 aa8.9□□□□□ -0.99
ZEB1-219ENST00000560721 OSCARQ8IYS5 282 aa8.9□□□□□ -0.99
ZEB1-219ENST00000560721 AGLP35573 1532 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms