RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 IGF1RP08069 1367 aa30.48■■■□□ 2.47
CRTC3-208ENST00000560098 CUL7Q14999 1698 aa30.39■■■□□ 2.46
CRTC3-208ENST00000560098 KIAA0586Q9BVV6 1533 aa30.39■■■□□ 2.45
CRTC3-208ENST00000560098 NPM1P06748 294 aaKnown RBP eCLIP30.29■■■□□ 2.44
CRTC3-208ENST00000560098 CARMIL1Q5VZK9 1371 aa30.27■■■□□ 2.44
CRTC3-208ENST00000560098 KIF13AQ9H1H9 1805 aa30.26■■■□□ 2.43
CRTC3-208ENST00000560098 ADCY10Q96PN6 1610 aa30.22■■■□□ 2.43
CRTC3-208ENST00000560098 MAPKBP1O60336 1514 aa30.21■■■□□ 2.43
CRTC3-208ENST00000560098 AEBP2Q6ZN18 517 aaPredicted RBP30.21■■■□□ 2.43
CRTC3-208ENST00000560098 ABCC10Q5T3U5 1492 aa30.19■■■□□ 2.42
CRTC3-208ENST00000560098 FAM69CQ0P6D2 419 aa30.18■■■□□ 2.42
CRTC3-208ENST00000560098 PTPRGP23470 1445 aa30.12■■■□□ 2.41
CRTC3-208ENST00000560098 DIP2BQ9P265 1576 aa30.1■■■□□ 2.41
CRTC3-208ENST00000560098 CARMIL2Q6F5E8 1435 aa30.09■■■□□ 2.41
CRTC3-208ENST00000560098 IQGAP2Q13576 1575 aa30.07■■■□□ 2.4
CRTC3-208ENST00000560098 TNIKQ9UKE5 1360 aa30.06■■■□□ 2.4
CRTC3-208ENST00000560098 TTBK1Q5TCY1 1321 aaPredicted RBP30.04■■■□□ 2.4
CRTC3-208ENST00000560098 RAPGEF2Q9Y4G8 1499 aa29.99■■■□□ 2.39
CRTC3-208ENST00000560098 ABCC2Q92887 1545 aa29.95■■■□□ 2.39
CRTC3-208ENST00000560098 DISP1Q96F81 1524 aa29.94■■■□□ 2.38
CRTC3-208ENST00000560098 UHRF1BP1LA0JNW5 1464 aa29.9■■■□□ 2.38
CRTC3-208ENST00000560098 UGGT2Q9NYU1 1516 aa29.88■■■□□ 2.37
CRTC3-208ENST00000560098 UACAQ9BZF9 1416 aa29.88■■■□□ 2.37
CRTC3-208ENST00000560098 ASXL2Q76L83 1435 aa29.85■■■□□ 2.37
CRTC3-208ENST00000560098 KDM6BO15054 1643 aa29.84■■■□□ 2.37
CRTC3-208ENST00000560098 PLB1Q6P1J6 1458 aa29.84■■■□□ 2.37
CRTC3-208ENST00000560098 TSPOAP1O95153 1857 aa29.83■■■□□ 2.37
CRTC3-208ENST00000560098 KIAA0556O60303 1618 aa29.79■■■□□ 2.36
CRTC3-208ENST00000560098 GLI2P10070 1586 aa29.76■■■□□ 2.35
CRTC3-208ENST00000560098 KDM5BQ9UGL1 1544 aa29.76■■■□□ 2.35
CRTC3-208ENST00000560098 CTTNBP2Q8WZ74 1663 aa29.69■■■□□ 2.34
CRTC3-208ENST00000560098 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
CRTC3-208ENST00000560098 EPRSP07814 1512 aaKnown RBP29.67■■■□□ 2.34
CRTC3-208ENST00000560098 ZCCHC11Q5TAX3 1644 aaKnown RBP29.67■■■□□ 2.34
CRTC3-208ENST00000560098 PPRC1Q5VV67 1664 aaKnown RBP29.66■■■□□ 2.34
CRTC3-208ENST00000560098 GOLGA3Q08378 1498 aa29.65■■■□□ 2.34
CRTC3-208ENST00000560098 KDM4FA0A1W2PPD8 638 aa29.59■■■□□ 2.33
CRTC3-208ENST00000560098 MAP3K4Q9Y6R4 1608 aa29.58■■■□□ 2.33
CRTC3-208ENST00000560098 WDR7Q9Y4E6 1490 aa29.56■■■□□ 2.32
CRTC3-208ENST00000560098 TEX14Q8IWB6 1497 aa29.54■■■□□ 2.32
CRTC3-208ENST00000560098 ABCA8O94911 1581 aa29.53■■■□□ 2.32
CRTC3-208ENST00000560098 COL17A1Q9UMD9 1497 aaPredicted RBP29.51■■■□□ 2.31
CRTC3-208ENST00000560098 CSRNP3Q8WYN3 585 aa29.45■■■□□ 2.3
CRTC3-208ENST00000560098 FAM9AQ8IZU1 332 aaPredicted RBP29.41■■■□□ 2.3
CRTC3-208ENST00000560098 KCNH8Q96L42 1107 aa29.41■■■□□ 2.3
CRTC3-208ENST00000560098 P3H3Q8IVL6 736 aa29.39■■■□□ 2.3
CRTC3-208ENST00000560098 CD109Q6YHK3 1445 aa29.39■■■□□ 2.3
CRTC3-208ENST00000560098 MAGI3Q5TCQ9 1506 aa29.37■■■□□ 2.29
CRTC3-208ENST00000560098 CFAP43Q8NDM7 1665 aa29.35■■■□□ 2.29
CRTC3-208ENST00000560098 ADGRL1O94910 1474 aa29.34■■■□□ 2.29
CRTC3-208ENST00000560098 EEA1Q15075 1411 aa29.31■■■□□ 2.28
CRTC3-208ENST00000560098 SAMD9Q5K651 1589 aa29.31■■■□□ 2.28
CRTC3-208ENST00000560098 ATP10BO94823 1461 aa29.3■■■□□ 2.28
CRTC3-208ENST00000560098 ARID3CA6NKF2 412 aa29.3■■■□□ 2.28
CRTC3-208ENST00000560098 RAPGEF6Q8TEU7 1601 aa29.19■■■□□ 2.26
CRTC3-208ENST00000560098 RANGAP1P46060 587 aaPredicted RBP29.16■■■□□ 2.26
CRTC3-208ENST00000560098 ARAP3Q8WWN8 1544 aa29.14■■■□□ 2.25
CRTC3-208ENST00000560098 ABCA9Q8IUA7 1624 aa29.13■■■□□ 2.25
CRTC3-208ENST00000560098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.13■■■□□ 2.25
CRTC3-208ENST00000560098 HNRNPUL2Q1KMD3 747 aaKnown RBP29.13■■■□□ 2.25
CRTC3-208ENST00000560098 FHOD3Q2V2M9 1422 aa29.12■■■□□ 2.25
CRTC3-208ENST00000560098 NUP153P49790 1475 aaKnown RBP29.11■■■□□ 2.25
CRTC3-208ENST00000560098 PHLDB1Q86UU1 1377 aa29.09■■■□□ 2.25
CRTC3-208ENST00000560098 KIF21BO75037 1637 aa29.06■■■□□ 2.24
CRTC3-208ENST00000560098 NEO1Q92859 1461 aa29.02■■■□□ 2.24
CRTC3-208ENST00000560098 EFCAB5A4FU69 1503 aa29.02■■■□□ 2.24
CRTC3-208ENST00000560098 PLEKHD1A6NEE1 506 aa28.99■■■□□ 2.23
CRTC3-208ENST00000560098 RAPGEF3O95398 923 aa28.97■■■□□ 2.23
CRTC3-208ENST00000560098 HECW2Q9P2P5 1572 aa28.93■■■□□ 2.22
CRTC3-208ENST00000560098 UBTFP17480 764 aaKnown RBP28.88■■■□□ 2.21
CRTC3-208ENST00000560098 EHMT2Q96KQ7 1210 aa28.86■■■□□ 2.21
CRTC3-208ENST00000560098 FRMPD1Q5SYB0 1578 aa28.86■■■□□ 2.21
CRTC3-208ENST00000560098 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
CRTC3-208ENST00000560098 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.85■■■□□ 2.21
CRTC3-208ENST00000560098 FANCAO15360 1455 aa28.82■■■□□ 2.2
CRTC3-208ENST00000560098 CDK13Q14004 1512 aaKnown RBP28.82■■■□□ 2.2
CRTC3-208ENST00000560098 AKNAQ7Z591 1439 aa28.81■■■□□ 2.2
CRTC3-208ENST00000560098 DENND4BO75064 1496 aaPredicted RBP28.81■■■□□ 2.2
CRTC3-208ENST00000560098 TTC37Q6PGP7 1564 aa28.78■■■□□ 2.2
CRTC3-208ENST00000560098 CFAP74Q9C0B2 1584 aa28.78■■■□□ 2.2
CRTC3-208ENST00000560098 FMN1Q68DA7 1419 aa28.78■■■□□ 2.2
CRTC3-208ENST00000560098 ADAMTSL3P82987 1691 aa28.78■■■□□ 2.2
CRTC3-208ENST00000560098 ARID4BQ4LE39 1312 aaPredicted RBP28.76■■■□□ 2.19
CRTC3-208ENST00000560098 ARHGAP35Q9NRY4 1499 aa28.76■■■□□ 2.19
CRTC3-208ENST00000560098 PTPRMP28827 1452 aa28.75■■■□□ 2.19
CRTC3-208ENST00000560098 RICTORQ6R327 1708 aa28.74■■■□□ 2.19
CRTC3-208ENST00000560098 ATP1B4Q9UN42 357 aaPredicted RBP28.74■■■□□ 2.19
CRTC3-208ENST00000560098 ARHGEF40Q8TER5 1519 aa28.73■■■□□ 2.19
CRTC3-208ENST00000560098 HECW1Q76N89 1606 aa28.71■■■□□ 2.19
CRTC3-208ENST00000560098 ILDR1Q86SU0 546 aaPredicted RBP28.71■■■□□ 2.19
CRTC3-208ENST00000560098 BCORL1Q5H9F3 1711 aa28.71■■■□□ 2.19
CRTC3-208ENST00000560098 PLCH2O75038 1416 aa28.68■■■□□ 2.18
CRTC3-208ENST00000560098 CDK11AQ9UQ88 783 aaPredicted RBP28.67■■■□□ 2.18
CRTC3-208ENST00000560098 ZMYM4Q5VZL5 1548 aa28.67■■■□□ 2.18
CRTC3-208ENST00000560098 MADDQ8WXG6 1647 aa28.65■■■□□ 2.18
CRTC3-208ENST00000560098 MAGI2Q86UL8 1455 aa28.62■■■□□ 2.17
CRTC3-208ENST00000560098 ZFYVE16Q7Z3T8 1539 aa28.61■■■□□ 2.17
CRTC3-208ENST00000560098 SCAPERQ9BY12 1400 aa28.61■■■□□ 2.17
CRTC3-208ENST00000560098 YEATS2Q9ULM3 1422 aa28.6■■■□□ 2.17
CRTC3-208ENST00000560098 POGZQ7Z3K3 1410 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms