RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 RUSC2Q8N2Y8 1516 aa29.37■■■□□ 2.29
AC105339.3-201ENST00000560043 PRG4Q92954 1404 aaPredicted RBP29.37■■■□□ 2.29
AC105339.3-201ENST00000560043 KIAA0586Q9BVV6 1533 aa29.35■■■□□ 2.29
AC105339.3-201ENST00000560043 RAPGEF2Q9Y4G8 1499 aa29.25■■■□□ 2.27
AC105339.3-201ENST00000560043 TRHP20396 242 aaPredicted RBP29.21■■■□□ 2.27
AC105339.3-201ENST00000560043 IQGAP2Q13576 1575 aa29.11■■■□□ 2.25
AC105339.3-201ENST00000560043 CARMIL2Q6F5E8 1435 aa29.07■■■□□ 2.24
AC105339.3-201ENST00000560043 PRXQ9BXM0 1461 aa29.07■■■□□ 2.24
AC105339.3-201ENST00000560043 CSRNP3Q8WYN3 585 aa29.05■■■□□ 2.24
AC105339.3-201ENST00000560043 EEA1Q15075 1411 aa29.01■■■□□ 2.23
AC105339.3-201ENST00000560043 PTPRGP23470 1445 aa29■■■□□ 2.23
AC105339.3-201ENST00000560043 TNIKQ9UKE5 1360 aa29■■■□□ 2.23
AC105339.3-201ENST00000560043 CHIC1Q5VXU3 224 aa28.99■■■□□ 2.23
AC105339.3-201ENST00000560043 NPM1P06748 294 aaKnown RBP eCLIP28.97■■■□□ 2.23
AC105339.3-201ENST00000560043 UGGT2Q9NYU1 1516 aa28.96■■■□□ 2.23
AC105339.3-201ENST00000560043 TTBK1Q5TCY1 1321 aaPredicted RBP28.94■■■□□ 2.22
AC105339.3-201ENST00000560043 DISP1Q96F81 1524 aa28.94■■■□□ 2.22
AC105339.3-201ENST00000560043 CTTNBP2Q8WZ74 1663 aa28.91■■■□□ 2.22
AC105339.3-201ENST00000560043 FAM9AQ8IZU1 332 aaPredicted RBP28.89■■■□□ 2.22
AC105339.3-201ENST00000560043 ADCY10Q96PN6 1610 aa28.89■■■□□ 2.22
AC105339.3-201ENST00000560043 KIAA0556O60303 1618 aa28.83■■■□□ 2.21
AC105339.3-201ENST00000560043 GOLGA3Q08378 1498 aa28.82■■■□□ 2.2
AC105339.3-201ENST00000560043 UACAQ9BZF9 1416 aa28.77■■■□□ 2.2
AC105339.3-201ENST00000560043 MAPKBP1O60336 1514 aa28.77■■■□□ 2.2
AC105339.3-201ENST00000560043 UHRF1BP1LA0JNW5 1464 aa28.75■■■□□ 2.19
AC105339.3-201ENST00000560043 ABCC2Q92887 1545 aa28.74■■■□□ 2.19
AC105339.3-201ENST00000560043 ABCC10Q5T3U5 1492 aa28.7■■■□□ 2.18
AC105339.3-201ENST00000560043 FAM69CQ0P6D2 419 aa28.69■■■□□ 2.18
AC105339.3-201ENST00000560043 KIF21BO75037 1637 aa28.67■■■□□ 2.18
AC105339.3-201ENST00000560043 KIF13AQ9H1H9 1805 aa28.65■■■□□ 2.18
AC105339.3-201ENST00000560043 P3H3Q8IVL6 736 aa28.62■■■□□ 2.17
AC105339.3-201ENST00000560043 KDM5BQ9UGL1 1544 aa28.6■■■□□ 2.17
AC105339.3-201ENST00000560043 DIP2BQ9P265 1576 aa28.6■■■□□ 2.17
AC105339.3-201ENST00000560043 PLB1Q6P1J6 1458 aa28.59■■■□□ 2.17
AC105339.3-201ENST00000560043 ASXL2Q76L83 1435 aa28.59■■■□□ 2.17
AC105339.3-201ENST00000560043 RANGAP1P46060 587 aaPredicted RBP28.56■■■□□ 2.16
AC105339.3-201ENST00000560043 ABCA8O94911 1581 aa28.55■■■□□ 2.16
AC105339.3-201ENST00000560043 SAMD9Q5K651 1589 aa28.54■■■□□ 2.16
AC105339.3-201ENST00000560043 UBTFP17480 764 aaKnown RBP28.54■■■□□ 2.16
AC105339.3-201ENST00000560043 EHMT2Q96KQ7 1210 aa28.53■■■□□ 2.16
AC105339.3-201ENST00000560043 ZCCHC11Q5TAX3 1644 aaKnown RBP28.51■■■□□ 2.15
AC105339.3-201ENST00000560043 GLI2P10070 1586 aa28.43■■■□□ 2.14
AC105339.3-201ENST00000560043 FHOD3Q2V2M9 1422 aa28.42■■■□□ 2.14
AC105339.3-201ENST00000560043 EFCAB5A4FU69 1503 aa28.41■■■□□ 2.14
AC105339.3-201ENST00000560043 EPRSP07814 1512 aaKnown RBP28.41■■■□□ 2.14
AC105339.3-201ENST00000560043 WDR7Q9Y4E6 1490 aa28.4■■■□□ 2.14
AC105339.3-201ENST00000560043 ARID3CA6NKF2 412 aa28.36■■■□□ 2.13
AC105339.3-201ENST00000560043 TSPOAP1O95153 1857 aa28.36■■■□□ 2.13
AC105339.3-201ENST00000560043 ATP10BO94823 1461 aa28.34■■■□□ 2.13
AC105339.3-201ENST00000560043 RAPGEF6Q8TEU7 1601 aa28.34■■■□□ 2.13
AC105339.3-201ENST00000560043 KCNH8Q96L42 1107 aa28.31■■■□□ 2.12
AC105339.3-201ENST00000560043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.27■■■□□ 2.12
AC105339.3-201ENST00000560043 HNRNPUL2Q1KMD3 747 aaKnown RBP28.27■■■□□ 2.12
AC105339.3-201ENST00000560043 MAP3K4Q9Y6R4 1608 aa28.25■■■□□ 2.11
AC105339.3-201ENST00000560043 NUP153P49790 1475 aaKnown RBP28.25■■■□□ 2.11
AC105339.3-201ENST00000560043 ARHGAP35Q9NRY4 1499 aa28.23■■■□□ 2.11
AC105339.3-201ENST00000560043 KDM6BO15054 1643 aa28.23■■■□□ 2.11
AC105339.3-201ENST00000560043 PPRC1Q5VV67 1664 aaKnown RBP28.23■■■□□ 2.11
AC105339.3-201ENST00000560043 TEX14Q8IWB6 1497 aa28.21■■■□□ 2.11
AC105339.3-201ENST00000560043 FMN1Q68DA7 1419 aa28.18■■■□□ 2.1
AC105339.3-201ENST00000560043 CD109Q6YHK3 1445 aa28.18■■■□□ 2.1
AC105339.3-201ENST00000560043 CFAP43Q8NDM7 1665 aa28.15■■■□□ 2.1
AC105339.3-201ENST00000560043 PLEKHD1A6NEE1 506 aa28.13■■■□□ 2.09
AC105339.3-201ENST00000560043 MAGI3Q5TCQ9 1506 aa28.13■■■□□ 2.09
AC105339.3-201ENST00000560043 ATP1B4Q9UN42 357 aaPredicted RBP28.11■■■□□ 2.09
AC105339.3-201ENST00000560043 ABCA9Q8IUA7 1624 aa28.04■■■□□ 2.08
AC105339.3-201ENST00000560043 COL17A1Q9UMD9 1497 aaPredicted RBP28.04■■■□□ 2.08
AC105339.3-201ENST00000560043 HECW1Q76N89 1606 aa28.03■■■□□ 2.08
AC105339.3-201ENST00000560043 CDK13Q14004 1512 aaKnown RBP28.02■■■□□ 2.08
AC105339.3-201ENST00000560043 CLIP1P30622 1438 aa28.01■■■□□ 2.08
AC105339.3-201ENST00000560043 CDK11AQ9UQ88 783 aaPredicted RBP27.97■■■□□ 2.07
AC105339.3-201ENST00000560043 PHLDB1Q86UU1 1377 aa27.94■■■□□ 2.06
AC105339.3-201ENST00000560043 AEBP2Q6ZN18 517 aaPredicted RBP27.93■■■□□ 2.06
AC105339.3-201ENST00000560043 CASKIN1Q8WXD9 1431 aa27.92■■■□□ 2.06
AC105339.3-201ENST00000560043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.88■■■□□ 2.05
AC105339.3-201ENST00000560043 ARAP3Q8WWN8 1544 aa27.88■■■□□ 2.05
AC105339.3-201ENST00000560043 NEO1Q92859 1461 aa27.88■■■□□ 2.05
AC105339.3-201ENST00000560043 PCF11O94913 1555 aaKnown RBP27.86■■■□□ 2.05
AC105339.3-201ENST00000560043 CCDC18Q5T9S5 1454 aa27.83■■■□□ 2.05
AC105339.3-201ENST00000560043 TROQ12816 1431 aaPredicted RBP27.83■■■□□ 2.05
AC105339.3-201ENST00000560043 FYCO1Q9BQS8 1478 aa27.83■■■□□ 2.04
AC105339.3-201ENST00000560043 TTC37Q6PGP7 1564 aa27.82■■■□□ 2.04
AC105339.3-201ENST00000560043 LOC105371045A0A1W2PR82 267 aa27.81■■■□□ 2.04
AC105339.3-201ENST00000560043 CEP162Q5TB80 1403 aa27.81■■■□□ 2.04
AC105339.3-201ENST00000560043 LRRIQ1Q96JM4 1722 aa27.81■■■□□ 2.04
AC105339.3-201ENST00000560043 FANCAO15360 1455 aa27.78■■■□□ 2.04
AC105339.3-201ENST00000560043 PLCH2O75038 1416 aa27.76■■■□□ 2.04
AC105339.3-201ENST00000560043 RAPGEF3O95398 923 aa27.76■■■□□ 2.03
AC105339.3-201ENST00000560043 AKNAQ7Z591 1439 aa27.75■■■□□ 2.03
AC105339.3-201ENST00000560043 KIF14Q15058 1648 aa27.74■■■□□ 2.03
AC105339.3-201ENST00000560043 CFAP74Q9C0B2 1584 aa27.74■■■□□ 2.03
AC105339.3-201ENST00000560043 KDM4FA0A1W2PPD8 638 aa27.74■■■□□ 2.03
AC105339.3-201ENST00000560043 EFCAB2Q5VUJ9 269 aa27.7■■■□□ 2.02
AC105339.3-201ENST00000560043 DENND4BO75064 1496 aaPredicted RBP27.7■■■□□ 2.02
AC105339.3-201ENST00000560043 MYO5CQ9NQX4 1742 aa27.66■■■□□ 2.02
AC105339.3-201ENST00000560043 FRMPD1Q5SYB0 1578 aa27.64■■■□□ 2.01
AC105339.3-201ENST00000560043 ADGRL1O94910 1474 aa27.63■■■□□ 2.01
AC105339.3-201ENST00000560043 SCAPERQ9BY12 1400 aa27.61■■■□□ 2.01
AC105339.3-201ENST00000560043 ARHGAP5Q13017 1502 aa27.6■■■□□ 2.01
AC105339.3-201ENST00000560043 RICTORQ6R327 1708 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms