RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 CCDC88BA6NC98 1476 aa18.24■□□□□ 0.51
PPP1R3E-204ENST00000559942 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
PPP1R3E-204ENST00000559942 TOP2BQ02880 1626 aa18.2■□□□□ 0.5
PPP1R3E-204ENST00000559942 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
PPP1R3E-204ENST00000559942 NUP160Q12769 1436 aa18.18■□□□□ 0.5
PPP1R3E-204ENST00000559942 SPATA31D1Q6ZQQ2 1576 aa18.17■□□□□ 0.5
PPP1R3E-204ENST00000559942 PRG4Q92954 1404 aaPredicted RBP18.16■□□□□ 0.5
PPP1R3E-204ENST00000559942 CERKQ8TCT0 537 aa18.14■□□□□ 0.49
PPP1R3E-204ENST00000559942 ADCY10Q96PN6 1610 aa18.1■□□□□ 0.49
PPP1R3E-204ENST00000559942 COL17A1Q9UMD9 1497 aaPredicted RBP18.1■□□□□ 0.49
PPP1R3E-204ENST00000559942 JPH4Q96JJ6 628 aa18.08■□□□□ 0.48
PPP1R3E-204ENST00000559942 PPRC1Q5VV67 1664 aaKnown RBP18.08■□□□□ 0.48
PPP1R3E-204ENST00000559942 ABCA5Q8WWZ7 1642 aa18■□□□□ 0.47
PPP1R3E-204ENST00000559942 ADAMTS12P58397 1594 aa17.96■□□□□ 0.47
PPP1R3E-204ENST00000559942 CUX1P39880 1505 aa17.96■□□□□ 0.47
PPP1R3E-204ENST00000559942 GLI2P10070 1586 aa17.96■□□□□ 0.46
PPP1R3E-204ENST00000559942 ABCA10Q8WWZ4 1543 aa17.93■□□□□ 0.46
PPP1R3E-204ENST00000559942 PCF11O94913 1555 aaKnown RBP17.92■□□□□ 0.46
PPP1R3E-204ENST00000559942 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
PPP1R3E-204ENST00000559942 PTPRMP28827 1452 aa17.9■□□□□ 0.46
PPP1R3E-204ENST00000559942 TEX14Q8IWB6 1497 aa17.88■□□□□ 0.45
PPP1R3E-204ENST00000559942 PLB1Q6P1J6 1458 aa17.87■□□□□ 0.45
PPP1R3E-204ENST00000559942 ASXL2Q76L83 1435 aa17.86■□□□□ 0.45
PPP1R3E-204ENST00000559942 HSPA2P54652 639 aa17.82■□□□□ 0.44
PPP1R3E-204ENST00000559942 KIF21BO75037 1637 aa17.82■□□□□ 0.44
PPP1R3E-204ENST00000559942 MAP3K4Q9Y6R4 1608 aa17.8■□□□□ 0.44
PPP1R3E-204ENST00000559942 ADAMTSL3P82987 1691 aa17.77■□□□□ 0.43
PPP1R3E-204ENST00000559942 ABCC2Q92887 1545 aa17.76■□□□□ 0.43
PPP1R3E-204ENST00000559942 EPRSP07814 1512 aaKnown RBP17.73■□□□□ 0.43
PPP1R3E-204ENST00000559942 RUSC2Q8N2Y8 1516 aa17.73■□□□□ 0.43
PPP1R3E-204ENST00000559942 PTPRGP23470 1445 aa17.71■□□□□ 0.43
PPP1R3E-204ENST00000559942 TTBK1Q5TCY1 1321 aaPredicted RBP17.7■□□□□ 0.42
PPP1R3E-204ENST00000559942 KIAA0586Q9BVV6 1533 aa17.69■□□□□ 0.42
PPP1R3E-204ENST00000559942 CUL7Q14999 1698 aa17.68■□□□□ 0.42
PPP1R3E-204ENST00000559942 ERICH3Q5RHP9 1530 aa17.67■□□□□ 0.42
PPP1R3E-204ENST00000559942 MADDQ8WXG6 1647 aa17.61■□□□□ 0.41
PPP1R3E-204ENST00000559942 WRNQ14191 1432 aaPredicted RBP eCLIP17.6■□□□□ 0.41
PPP1R3E-204ENST00000559942 BCORL1Q5H9F3 1711 aa17.58■□□□□ 0.4
PPP1R3E-204ENST00000559942 ARID4BQ4LE39 1312 aaPredicted RBP17.56■□□□□ 0.4
PPP1R3E-204ENST00000559942 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
PPP1R3E-204ENST00000559942 DMRT2Q9Y5R5 561 aa17.56■□□□□ 0.4
PPP1R3E-204ENST00000559942 UHRF1BP1LA0JNW5 1464 aa17.56■□□□□ 0.4
PPP1R3E-204ENST00000559942 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
PPP1R3E-204ENST00000559942 MAGI3Q5TCQ9 1506 aa17.53■□□□□ 0.4
PPP1R3E-204ENST00000559942 RIMS1Q86UR5 1692 aaKnown RBP17.52■□□□□ 0.4
PPP1R3E-204ENST00000559942 CD109Q6YHK3 1445 aa17.52■□□□□ 0.4
PPP1R3E-204ENST00000559942 UACAQ9BZF9 1416 aa17.5■□□□□ 0.39
PPP1R3E-204ENST00000559942 KDM5BQ9UGL1 1544 aa17.49■□□□□ 0.39
PPP1R3E-204ENST00000559942 YEATS2Q9ULM3 1422 aa17.47■□□□□ 0.39
PPP1R3E-204ENST00000559942 CARMIL2Q6F5E8 1435 aa17.46■□□□□ 0.39
PPP1R3E-204ENST00000559942 ARAP3Q8WWN8 1544 aa17.45■□□□□ 0.38
PPP1R3E-204ENST00000559942 CFAP43Q8NDM7 1665 aa17.45■□□□□ 0.38
PPP1R3E-204ENST00000559942 ZCCHC11Q5TAX3 1644 aaKnown RBP17.44■□□□□ 0.38
PPP1R3E-204ENST00000559942 IQSEC2Q5JU85 1478 aa17.43■□□□□ 0.38
PPP1R3E-204ENST00000559942 WDR7Q9Y4E6 1490 aa17.43■□□□□ 0.38
PPP1R3E-204ENST00000559942 MED1Q15648 1581 aaPredicted RBP17.41■□□□□ 0.38
PPP1R3E-204ENST00000559942 STRCQ7RTU9 1775 aa17.41■□□□□ 0.38
PPP1R3E-204ENST00000559942 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
PPP1R3E-204ENST00000559942 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
PPP1R3E-204ENST00000559942 UBAP1LF5GYI3 381 aa17.36■□□□□ 0.37
PPP1R3E-204ENST00000559942 RAPGEF3O95398 923 aa17.36■□□□□ 0.37
PPP1R3E-204ENST00000559942 LTBP4Q8N2S1 1624 aa17.36■□□□□ 0.37
PPP1R3E-204ENST00000559942 PTPRTO14522 1441 aa17.31■□□□□ 0.36
PPP1R3E-204ENST00000559942 PREX1Q8TCU6 1659 aa17.29■□□□□ 0.36
PPP1R3E-204ENST00000559942 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
PPP1R3E-204ENST00000559942 PHLDB1Q86UU1 1377 aa17.28■□□□□ 0.36
PPP1R3E-204ENST00000559942 POGZQ7Z3K3 1410 aa17.27■□□□□ 0.35
PPP1R3E-204ENST00000559942 HSPA1LP34931 641 aa17.25■□□□□ 0.35
PPP1R3E-204ENST00000559942 SETD1BQ9UPS6 1966 aaKnown RBP17.21■□□□□ 0.35
PPP1R3E-204ENST00000559942 TTC37Q6PGP7 1564 aa17.19■□□□□ 0.34
PPP1R3E-204ENST00000559942 MLECQ14165 292 aa17.19■□□□□ 0.34
PPP1R3E-204ENST00000559942 CHIC1Q5VXU3 224 aa17.19■□□□□ 0.34
PPP1R3E-204ENST00000559942 DISP1Q96F81 1524 aa17.19■□□□□ 0.34
PPP1R3E-204ENST00000559942 FER1L4A9Z1Z3 1794 aa17.19■□□□□ 0.34
PPP1R3E-204ENST00000559942 FANCAO15360 1455 aa17.18■□□□□ 0.34
PPP1R3E-204ENST00000559942 ARHGEF40Q8TER5 1519 aa17.16■□□□□ 0.34
PPP1R3E-204ENST00000559942 UHRF1BP1Q6BDS2 1440 aa17.16■□□□□ 0.34
PPP1R3E-204ENST00000559942 CEBPAP49715 358 aaPredicted RBP17.16■□□□□ 0.34
PPP1R3E-204ENST00000559942 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
PPP1R3E-204ENST00000559942 IGF1RP08069 1367 aa17.15■□□□□ 0.34
PPP1R3E-204ENST00000559942 IQGAP2Q13576 1575 aa17.15■□□□□ 0.34
PPP1R3E-204ENST00000559942 FRMPD1Q5SYB0 1578 aa17.15■□□□□ 0.34
PPP1R3E-204ENST00000559942 NEO1Q92859 1461 aa17.12■□□□□ 0.33
PPP1R3E-204ENST00000559942 PIP4K2BP78356 416 aa17.1■□□□□ 0.33
PPP1R3E-204ENST00000559942 AKNAQ7Z591 1439 aa17.1■□□□□ 0.33
PPP1R3E-204ENST00000559942 ZNF335Q9H4Z2 1342 aaPredicted RBP17.07■□□□□ 0.32
PPP1R3E-204ENST00000559942 SIGLEC1Q9BZZ2 1709 aa17.07■□□□□ 0.32
PPP1R3E-204ENST00000559942 RGS17Q9UGC6 210 aaPredicted RBP17.04■□□□□ 0.32
PPP1R3E-204ENST00000559942 ABCA9Q8IUA7 1624 aa17.03■□□□□ 0.32
PPP1R3E-204ENST00000559942 TOM1O60784 492 aa17.02■□□□□ 0.32
PPP1R3E-204ENST00000559942 KIAA0556O60303 1618 aa17.02■□□□□ 0.31
PPP1R3E-204ENST00000559942 NCOA1Q15788 1441 aa17.01■□□□□ 0.31
PPP1R3E-204ENST00000559942 CARMIL1Q5VZK9 1371 aa17.01■□□□□ 0.31
PPP1R3E-204ENST00000559942 DENND4BO75064 1496 aaPredicted RBP17■□□□□ 0.31
PPP1R3E-204ENST00000559942 RICTORQ6R327 1708 aa17■□□□□ 0.31
PPP1R3E-204ENST00000559942 UGGT2Q9NYU1 1516 aa17■□□□□ 0.31
PPP1R3E-204ENST00000559942 ARHGEF12Q9NZN5 1544 aa17■□□□□ 0.31
PPP1R3E-204ENST00000559942 ZFYVE16Q7Z3T8 1539 aa16.97■□□□□ 0.31
PPP1R3E-204ENST00000559942 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.31
PPP1R3E-204ENST00000559942 ABCA8O94911 1581 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms