RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 NISCHQ9Y2I1 1504 aa24.73■■□□□ 1.55
PPP1R3E-204ENST00000559942 ABCC9O60706 1549 aa24.23■■□□□ 1.47
PPP1R3E-204ENST00000559942 DNAJC5BQ9UF47 199 aa24.04■■□□□ 1.44
PPP1R3E-204ENST00000559942 DNAJC5Q9H3Z4 198 aa23.14■■□□□ 1.29
PPP1R3E-204ENST00000559942 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
PPP1R3E-204ENST00000559942 RB1CC1Q8TDY2 1594 aa22.41■■□□□ 1.18
PPP1R3E-204ENST00000559942 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.176e-6■■□□□ 12.8
PPP1R3E-204ENST00000559942 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
PPP1R3E-204ENST00000559942 UNC13AQ9UPW8 1703 aa21.91■■□□□ 1.1
PPP1R3E-204ENST00000559942 NACADO15069 1562 aa21.91■■□□□ 1.1
PPP1R3E-204ENST00000559942 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
PPP1R3E-204ENST00000559942 BICRAQ9NZM4 1560 aa21.79■■□□□ 1.08
PPP1R3E-204ENST00000559942 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.05
PPP1R3E-204ENST00000559942 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
PPP1R3E-204ENST00000559942 CUX2O14529 1486 aa21.45■■□□□ 1.02
PPP1R3E-204ENST00000559942 EIF4G1Q04637 1599 aaKnown RBP21.39■■□□□ 1.01
PPP1R3E-204ENST00000559942 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
PPP1R3E-204ENST00000559942 MYO15BQ96JP2 1530 aa21.11■□□□□ 0.97
PPP1R3E-204ENST00000559942 ERCC6Q03468 1493 aa21.03■□□□□ 0.96
PPP1R3E-204ENST00000559942 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
PPP1R3E-204ENST00000559942 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
PPP1R3E-204ENST00000559942 THOC2Q8NI27 1593 aaKnown RBP20.43■□□□□ 0.86
PPP1R3E-204ENST00000559942 NESP48681 1621 aa20.4■□□□□ 0.86
PPP1R3E-204ENST00000559942 OSCARQ8IYS5 282 aa20.33■□□□□ 0.85
PPP1R3E-204ENST00000559942 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
PPP1R3E-204ENST00000559942 NCAPD3P42695 1498 aa20.26■□□□□ 0.83
PPP1R3E-204ENST00000559942 TRHP20396 242 aaPredicted RBP20.21■□□□□ 0.83
PPP1R3E-204ENST00000559942 SMARCA2P51531 1590 aa20.2■□□□□ 0.82
PPP1R3E-204ENST00000559942 BAZ1AQ9NRL2 1556 aaPredicted RBP20.2■□□□□ 0.82
PPP1R3E-204ENST00000559942 ZCCHC6Q5VYS8 1495 aaKnown RBP20.16■□□□□ 0.82
PPP1R3E-204ENST00000559942 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
PPP1R3E-204ENST00000559942 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
PPP1R3E-204ENST00000559942 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
PPP1R3E-204ENST00000559942 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
PPP1R3E-204ENST00000559942 ILDR1Q86SU0 546 aaPredicted RBP20.05■□□□□ 0.8
PPP1R3E-204ENST00000559942 LAMC3Q9Y6N6 1575 aa20■□□□□ 0.79
PPP1R3E-204ENST00000559942 PDS5BQ9NTI5 1447 aa19.99■□□□□ 0.79
PPP1R3E-204ENST00000559942 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
PPP1R3E-204ENST00000559942 CYB5RLQ6IPT4 315 aa19.95■□□□□ 0.78
PPP1R3E-204ENST00000559942 HMGXB3Q12766 1538 aa19.93■□□□□ 0.78
PPP1R3E-204ENST00000559942 ARHGEF11O15085 1522 aa19.92■□□□□ 0.78
PPP1R3E-204ENST00000559942 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
PPP1R3E-204ENST00000559942 WDR62O43379 1518 aa19.84■□□□□ 0.77
PPP1R3E-204ENST00000559942 BAZ1BQ9UIG0 1483 aaKnown RBP19.72■□□□□ 0.75
PPP1R3E-204ENST00000559942 ARAP1Q96P48 1450 aa19.61■□□□□ 0.73
PPP1R3E-204ENST00000559942 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
PPP1R3E-204ENST00000559942 SMARCA4P51532 1647 aa19.58■□□□□ 0.73
PPP1R3E-204ENST00000559942 CEP164Q9UPV0 1460 aa19.49■□□□□ 0.71
PPP1R3E-204ENST00000559942 PEG3Q9GZU2 1588 aa19.39■□□□□ 0.69
PPP1R3E-204ENST00000559942 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
PPP1R3E-204ENST00000559942 RSF1Q96T23 1441 aaPredicted RBP19.35■□□□□ 0.69
PPP1R3E-204ENST00000559942 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
PPP1R3E-204ENST00000559942 URB2Q14146 1524 aaKnown RBP19.27■□□□□ 0.68
PPP1R3E-204ENST00000559942 CHD1O14646 1710 aa19.22■□□□□ 0.67
PPP1R3E-204ENST00000559942 FBLN2P98095 1184 aa19.18■□□□□ 0.66
PPP1R3E-204ENST00000559942 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
PPP1R3E-204ENST00000559942 KDM4FA0A1W2PPD8 638 aa19.16■□□□□ 0.66
PPP1R3E-204ENST00000559942 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
PPP1R3E-204ENST00000559942 CFTRP13569 1480 aa19.04■□□□□ 0.64
PPP1R3E-204ENST00000559942 MROH2BQ7Z745 1585 aa19.04■□□□□ 0.64
PPP1R3E-204ENST00000559942 FBXO41Q8TF61 875 aa19.02■□□□□ 0.64
PPP1R3E-204ENST00000559942 AQRO60306 1485 aaKnown RBP eCLIP18.96■□□□□ 0.63
PPP1R3E-204ENST00000559942 ERCC6L2Q5T890 1561 aa18.94■□□□□ 0.62
PPP1R3E-204ENST00000559942 LMTK3Q96Q04 1460 aa18.94■□□□□ 0.62
PPP1R3E-204ENST00000559942 CLASP1Q7Z460 1538 aa18.94■□□□□ 0.62
PPP1R3E-204ENST00000559942 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
PPP1R3E-204ENST00000559942 SOCS7O14512 581 aa18.87■□□□□ 0.61
PPP1R3E-204ENST00000559942 KIF13AQ9H1H9 1805 aa18.86■□□□□ 0.61
PPP1R3E-204ENST00000559942 SYNJ1O43426 1573 aa18.83■□□□□ 0.6
PPP1R3E-204ENST00000559942 TOPBP1Q92547 1522 aa18.83■□□□□ 0.6
PPP1R3E-204ENST00000559942 HECW2Q9P2P5 1572 aa18.82■□□□□ 0.6
PPP1R3E-204ENST00000559942 CHMP7Q8WUX9 453 aaPredicted RBP18.79■□□□□ 0.6
PPP1R3E-204ENST00000559942 WIZO95785 1651 aa18.76■□□□□ 0.59
PPP1R3E-204ENST00000559942 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
PPP1R3E-204ENST00000559942 PRDM2Q13029 1718 aa18.72■□□□□ 0.59
PPP1R3E-204ENST00000559942 ILDR2Q71H61 639 aa18.72■□□□□ 0.59
PPP1R3E-204ENST00000559942 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
PPP1R3E-204ENST00000559942 SNAPC4Q5SXM2 1469 aa18.68■□□□□ 0.58
PPP1R3E-204ENST00000559942 KDM6BO15054 1643 aa18.67■□□□□ 0.58
PPP1R3E-204ENST00000559942 FAM69CQ0P6D2 419 aa18.67■□□□□ 0.58
PPP1R3E-204ENST00000559942 TDRD9Q8NDG6 1382 aaKnown RBP18.63■□□□□ 0.57
PPP1R3E-204ENST00000559942 SYNJ2O15056 1496 aa18.63■□□□□ 0.57
PPP1R3E-204ENST00000559942 ADGRL1O94910 1474 aa18.62■□□□□ 0.57
PPP1R3E-204ENST00000559942 DNMBPQ6XZF7 1577 aa18.61■□□□□ 0.57
PPP1R3E-204ENST00000559942 MAGI1Q96QZ7 1491 aaPredicted RBP18.58■□□□□ 0.56
PPP1R3E-204ENST00000559942 DISP3Q9P2K9 1392 aa18.56■□□□□ 0.56
PPP1R3E-204ENST00000559942 ABCC10Q5T3U5 1492 aa18.55■□□□□ 0.56
PPP1R3E-204ENST00000559942 POLA1P09884 1462 aaPredicted RBP18.53■□□□□ 0.56
PPP1R3E-204ENST00000559942 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.55
PPP1R3E-204ENST00000559942 TSPOAP1O95153 1857 aa18.47■□□□□ 0.55
PPP1R3E-204ENST00000559942 SOGA1O94964 1423 aa18.47■□□□□ 0.55
PPP1R3E-204ENST00000559942 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
PPP1R3E-204ENST00000559942 GRIN2BQ13224 1484 aa18.44■□□□□ 0.54
PPP1R3E-204ENST00000559942 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
PPP1R3E-204ENST00000559942 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
PPP1R3E-204ENST00000559942 CEP170Q5SW79 1584 aa18.39■□□□□ 0.53
PPP1R3E-204ENST00000559942 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.53
PPP1R3E-204ENST00000559942 MAPKBP1O60336 1514 aa18.35■□□□□ 0.53
PPP1R3E-204ENST00000559942 PBRM1Q86U86 1689 aa18.25■□□□□ 0.51
PPP1R3E-204ENST00000559942 SHROOM2Q13796 1616 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms