RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 LOC105371045A0A1W2PR82 267 aa26.85■■□□□ 1.89
TPM1-219ENST00000559397 CTTNBP2Q8WZ74 1663 aa26.84■■□□□ 1.89
TPM1-219ENST00000559397 KIAA0586Q9BVV6 1533 aa26.84■■□□□ 1.89
TPM1-219ENST00000559397 UBTFP17480 764 aaKnown RBP26.82■■□□□ 1.88
TPM1-219ENST00000559397 IQGAP2Q13576 1575 aa26.77■■□□□ 1.88
TPM1-219ENST00000559397 TNIKQ9UKE5 1360 aa26.74■■□□□ 1.87
TPM1-219ENST00000559397 SHROOM2Q13796 1616 aa26.71■■□□□ 1.87
TPM1-219ENST00000559397 JPH4Q96JJ6 628 aa26.7■■□□□ 1.86
TPM1-219ENST00000559397 UGGT2Q9NYU1 1516 aa26.67■■□□□ 1.86
TPM1-219ENST00000559397 PRG4Q92954 1404 aaPredicted RBP26.59■■□□□ 1.85
TPM1-219ENST00000559397 DISP1Q96F81 1524 aa26.58■■□□□ 1.84
TPM1-219ENST00000559397 RANGAP1P46060 587 aaPredicted RBP26.57■■□□□ 1.84
TPM1-219ENST00000559397 ERCC6L2Q5T890 1561 aa26.56■■□□□ 1.84
TPM1-219ENST00000559397 SAMD9Q5K651 1589 aa26.55■■□□□ 1.84
TPM1-219ENST00000559397 KIAA0556O60303 1618 aa26.52■■□□□ 1.84
TPM1-219ENST00000559397 CEP162Q5TB80 1403 aa26.52■■□□□ 1.84
TPM1-219ENST00000559397 EFCAB5A4FU69 1503 aa26.51■■□□□ 1.83
TPM1-219ENST00000559397 CARMIL2Q6F5E8 1435 aa26.51■■□□□ 1.83
TPM1-219ENST00000559397 ARHGAP35Q9NRY4 1499 aa26.5■■□□□ 1.83
TPM1-219ENST00000559397 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
TPM1-219ENST00000559397 CLIP1P30622 1438 aa26.49■■□□□ 1.83
TPM1-219ENST00000559397 DNAJC5Q9H3Z4 198 aa26.45■■□□□ 1.82
TPM1-219ENST00000559397 RIMBP3CA6NJZ7 1639 aa26.45■■□□□ 1.82
TPM1-219ENST00000559397 RIMBP3BA6NNM3 1639 aa26.45■■□□□ 1.82
TPM1-219ENST00000559397 RIMBP3Q9UFD9 1639 aa26.45■■□□□ 1.82
TPM1-219ENST00000559397 P3H3Q8IVL6 736 aa26.44■■□□□ 1.82
TPM1-219ENST00000559397 FHOD3Q2V2M9 1422 aa26.41■■□□□ 1.82
TPM1-219ENST00000559397 ARAP1Q96P48 1450 aa26.37■■□□□ 1.81
TPM1-219ENST00000559397 PTPRGP23470 1445 aa26.34■■□□□ 1.81
TPM1-219ENST00000559397 TTBK1Q5TCY1 1321 aaPredicted RBP26.29■■□□□ 1.8
TPM1-219ENST00000559397 FMN1Q68DA7 1419 aa26.25■■□□□ 1.79
TPM1-219ENST00000559397 PLB1Q6P1J6 1458 aa26.21■■□□□ 1.79
TPM1-219ENST00000559397 CYB5RLQ6IPT4 315 aa26.21■■□□□ 1.79
TPM1-219ENST00000559397 ABCA8O94911 1581 aa26.21■■□□□ 1.79
TPM1-219ENST00000559397 UACAQ9BZF9 1416 aa26.19■■□□□ 1.78
TPM1-219ENST00000559397 VPS8Q8N3P4 1428 aa26.17■■□□□ 1.78
TPM1-219ENST00000559397 RAPGEF6Q8TEU7 1601 aa26.17■■□□□ 1.78
TPM1-219ENST00000559397 UHRF1BP1LA0JNW5 1464 aa26.14■■□□□ 1.78
TPM1-219ENST00000559397 ABCC2Q92887 1545 aa26.14■■□□□ 1.77
TPM1-219ENST00000559397 PCF11O94913 1555 aaKnown RBP26.13■■□□□ 1.77
TPM1-219ENST00000559397 ADCY10Q96PN6 1610 aa26.13■■□□□ 1.77
TPM1-219ENST00000559397 CASKIN1Q8WXD9 1431 aa26.13■■□□□ 1.77
TPM1-219ENST00000559397 FYCO1Q9BQS8 1478 aa26.09■■□□□ 1.77
TPM1-219ENST00000559397 NUP153P49790 1475 aaKnown RBP26.08■■□□□ 1.77
TPM1-219ENST00000559397 HECW1Q76N89 1606 aa26.07■■□□□ 1.76
TPM1-219ENST00000559397 LRRIQ1Q96JM4 1722 aa26.03■■□□□ 1.76
TPM1-219ENST00000559397 ATP1B4Q9UN42 357 aaPredicted RBP26.02■■□□□ 1.76
TPM1-219ENST00000559397 KDM5BQ9UGL1 1544 aa26.02■■□□□ 1.76
TPM1-219ENST00000559397 ATP10BO94823 1461 aa26■■□□□ 1.75
TPM1-219ENST00000559397 EPRSP07814 1512 aaKnown RBP26■■□□□ 1.75
TPM1-219ENST00000559397 ZCCHC11Q5TAX3 1644 aaKnown RBP25.97■■□□□ 1.75
TPM1-219ENST00000559397 ARID3CA6NKF2 412 aa25.97■■□□□ 1.75
TPM1-219ENST00000559397 CDK13Q14004 1512 aaKnown RBP25.96■■□□□ 1.75
TPM1-219ENST00000559397 CCDC18Q5T9S5 1454 aa25.94■■□□□ 1.74
TPM1-219ENST00000559397 NPM1P06748 294 aaKnown RBP eCLIP25.92■■□□□ 1.74
TPM1-219ENST00000559397 MAP3K1Q13233 1512 aa25.88■■□□□ 1.73
TPM1-219ENST00000559397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.87■■□□□ 1.73
TPM1-219ENST00000559397 HNRNPUL2Q1KMD3 747 aaKnown RBP25.87■■□□□ 1.73
TPM1-219ENST00000559397 CFAP43Q8NDM7 1665 aa25.87■■□□□ 1.73
TPM1-219ENST00000559397 TIAM1Q13009 1591 aa25.87■■□□□ 1.73
TPM1-219ENST00000559397 MAPKBP1O60336 1514 aa25.84■■□□□ 1.73
TPM1-219ENST00000559397 MAGI3Q5TCQ9 1506 aa25.81■■□□□ 1.72
TPM1-219ENST00000559397 ASXL2Q76L83 1435 aa25.81■■□□□ 1.72
TPM1-219ENST00000559397 APLP2Q06481 763 aa25.8■■□□□ 1.72
TPM1-219ENST00000559397 CDK11AQ9UQ88 783 aaPredicted RBP25.8■■□□□ 1.72
TPM1-219ENST00000559397 PLEKHD1A6NEE1 506 aa25.79■■□□□ 1.72
TPM1-219ENST00000559397 WDR7Q9Y4E6 1490 aa25.77■■□□□ 1.72
TPM1-219ENST00000559397 LRRC9Q6ZRR7 1453 aa25.75■■□□□ 1.71
TPM1-219ENST00000559397 TROQ12816 1431 aaPredicted RBP25.75■■□□□ 1.71
TPM1-219ENST00000559397 KANK4Q5T7N3 995 aaPredicted RBP25.75■■□□□ 1.71
TPM1-219ENST00000559397 MTUS2Q5JR59 1369 aa25.72■■□□□ 1.71
TPM1-219ENST00000559397 EHBP1L1Q8N3D4 1523 aa25.72■■□□□ 1.71
TPM1-219ENST00000559397 KCNH8Q96L42 1107 aa25.67■■□□□ 1.7
TPM1-219ENST00000559397 KIF14Q15058 1648 aa25.66■■□□□ 1.7
TPM1-219ENST00000559397 ABCC10Q5T3U5 1492 aa25.65■■□□□ 1.7
TPM1-219ENST00000559397 DIP2BQ9P265 1576 aa25.63■■□□□ 1.69
TPM1-219ENST00000559397 TRIM26Q12899 539 aaPredicted RBP25.62■■□□□ 1.69
TPM1-219ENST00000559397 SUPT6HQ7KZ85 1726 aaKnown RBP25.61■■□□□ 1.69
TPM1-219ENST00000559397 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.61■■□□□ 1.69
TPM1-219ENST00000559397 PPARGC1BQ86YN6 1023 aaKnown RBP25.61■■□□□ 1.69
TPM1-219ENST00000559397 GLI2P10070 1586 aa25.6■■□□□ 1.69
TPM1-219ENST00000559397 ABCA9Q8IUA7 1624 aa25.58■■□□□ 1.69
TPM1-219ENST00000559397 KIF13AQ9H1H9 1805 aa25.58■■□□□ 1.69
TPM1-219ENST00000559397 NCOA2Q15596 1464 aa25.58■■□□□ 1.68
TPM1-219ENST00000559397 TTC37Q6PGP7 1564 aa25.57■■□□□ 1.68
TPM1-219ENST00000559397 FAM69CQ0P6D2 419 aa25.56■■□□□ 1.68
TPM1-219ENST00000559397 PCGF6Q9BYE7 350 aa25.56■■□□□ 1.68
TPM1-219ENST00000559397 MAP3K4Q9Y6R4 1608 aa25.51■■□□□ 1.67
TPM1-219ENST00000559397 GPATCH8Q9UKJ3 1502 aaKnown RBP25.48■■□□□ 1.67
TPM1-219ENST00000559397 CDC42BPAQ5VT25 1732 aa25.48■■□□□ 1.67
TPM1-219ENST00000559397 PHLDB1Q86UU1 1377 aa25.47■■□□□ 1.67
TPM1-219ENST00000559397 CD109Q6YHK3 1445 aa25.47■■□□□ 1.67
TPM1-219ENST00000559397 MYO5CQ9NQX4 1742 aa25.47■■□□□ 1.67
TPM1-219ENST00000559397 CCNB3Q8WWL7 1395 aa25.47■■□□□ 1.67
TPM1-219ENST00000559397 TRHP20396 242 aaPredicted RBP25.45■■□□□ 1.67
TPM1-219ENST00000559397 PLCH2O75038 1416 aa25.45■■□□□ 1.66
TPM1-219ENST00000559397 PREX2Q70Z35 1606 aa25.44■■□□□ 1.66
TPM1-219ENST00000559397 CDC42BPBQ9Y5S2 1711 aa25.44■■□□□ 1.66
TPM1-219ENST00000559397 ITSN2Q9NZM3 1697 aa25.42■■□□□ 1.66
TPM1-219ENST00000559397 ARAP3Q8WWN8 1544 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms