RNA–Protein interactions for RNA: ENST00000558246.1

AC087477.5-201, humanhuman

TSL 3 BASIC

Gene AC087477.5, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087477.5-201ENST00000558246 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
AC087477.5-201ENST00000558246 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
AC087477.5-201ENST00000558246 SSUH2Q9Y2M2 353 aa13.94□□□□□ -0.18
AC087477.5-201ENST00000558246 CUX2O14529 1486 aa13.93□□□□□ -0.18
AC087477.5-201ENST00000558246 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
AC087477.5-201ENST00000558246 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
AC087477.5-201ENST00000558246 CLEC11AQ9Y240 323 aa13.89□□□□□ -0.19
AC087477.5-201ENST00000558246 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
AC087477.5-201ENST00000558246 TNIKQ9UKE5 1360 aa13.87□□□□□ -0.19
AC087477.5-201ENST00000558246 NESP48681 1621 aa13.84□□□□□ -0.19
AC087477.5-201ENST00000558246 PRKAR2AP13861 404 aaKnown RBP13.84□□□□□ -0.19
AC087477.5-201ENST00000558246 FAM9AQ8IZU1 332 aaPredicted RBP13.84□□□□□ -0.19
AC087477.5-201ENST00000558246 ABCC8Q09428 1581 aa13.83□□□□□ -0.2
AC087477.5-201ENST00000558246 ERCC6Q03468 1493 aa13.82□□□□□ -0.2
AC087477.5-201ENST00000558246 EVX2Q03828 476 aa13.82□□□□□ -0.2
AC087477.5-201ENST00000558246 GOLGA3Q08378 1498 aa13.8□□□□□ -0.2
AC087477.5-201ENST00000558246 KIF21BO75037 1637 aa13.8□□□□□ -0.2
AC087477.5-201ENST00000558246 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
AC087477.5-201ENST00000558246 CEP164Q9UPV0 1460 aa13.78□□□□□ -0.2
AC087477.5-201ENST00000558246 THOC2Q8NI27 1593 aaKnown RBP13.78□□□□□ -0.2
AC087477.5-201ENST00000558246 LAMC3Q9Y6N6 1575 aa13.78□□□□□ -0.2
AC087477.5-201ENST00000558246 CEP162Q5TB80 1403 aa13.74□□□□□ -0.21
AC087477.5-201ENST00000558246 TOP2BQ02880 1626 aa13.72□□□□□ -0.21
AC087477.5-201ENST00000558246 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
AC087477.5-201ENST00000558246 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
AC087477.5-201ENST00000558246 C19orf67A6NJJ6 358 aa13.7□□□□□ -0.22
AC087477.5-201ENST00000558246 SOGA1O94964 1423 aa13.69□□□□□ -0.22
AC087477.5-201ENST00000558246 SYNJ1O43426 1573 aa13.68□□□□□ -0.22
AC087477.5-201ENST00000558246 PRDM2Q13029 1718 aa13.67□□□□□ -0.22
AC087477.5-201ENST00000558246 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
AC087477.5-201ENST00000558246 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
AC087477.5-201ENST00000558246 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
AC087477.5-201ENST00000558246 CADPSQ9ULU8 1353 aa13.64□□□□□ -0.23
AC087477.5-201ENST00000558246 CHADLQ6NUI6 762 aa13.62□□□□□ -0.23
AC087477.5-201ENST00000558246 UBTFP17480 764 aaKnown RBP13.61□□□□□ -0.23
AC087477.5-201ENST00000558246 CFTRP13569 1480 aa13.59□□□□□ -0.23
AC087477.5-201ENST00000558246 WDR62O43379 1518 aa13.57□□□□□ -0.24
AC087477.5-201ENST00000558246 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
AC087477.5-201ENST00000558246 VPS8Q8N3P4 1428 aa13.55□□□□□ -0.24
AC087477.5-201ENST00000558246 CLIP1P30622 1438 aa13.54□□□□□ -0.24
AC087477.5-201ENST00000558246 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
AC087477.5-201ENST00000558246 GABBR2O75899 941 aa13.53□□□□□ -0.24
AC087477.5-201ENST00000558246 KIF27Q86VH2 1401 aa13.51□□□□□ -0.25
AC087477.5-201ENST00000558246 PPARGC1BQ86YN6 1023 aaKnown RBP13.51□□□□□ -0.25
AC087477.5-201ENST00000558246 PRXQ9BXM0 1461 aa13.5□□□□□ -0.25
AC087477.5-201ENST00000558246 FANCD2Q9BXW9 1451 aa13.47□□□□□ -0.25
AC087477.5-201ENST00000558246 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
AC087477.5-201ENST00000558246 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
AC087477.5-201ENST00000558246 FARP1Q9Y4F1 1045 aaPredicted RBP13.45□□□□□ -0.26
AC087477.5-201ENST00000558246 CUX1P39880 1505 aa13.44□□□□□ -0.26
AC087477.5-201ENST00000558246 RAPGEF2Q9Y4G8 1499 aa13.43□□□□□ -0.26
AC087477.5-201ENST00000558246 CLSPNQ9HAW4 1339 aa13.4□□□□□ -0.26
AC087477.5-201ENST00000558246 URB2Q14146 1524 aaKnown RBP13.4□□□□□ -0.26
AC087477.5-201ENST00000558246 CD44P16070 742 aaKnown RBP13.39□□□□□ -0.27
AC087477.5-201ENST00000558246 MAP3K1Q13233 1512 aa13.37□□□□□ -0.27
AC087477.5-201ENST00000558246 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
AC087477.5-201ENST00000558246 CLCN6P51797 869 aa13.35□□□□□ -0.27
AC087477.5-201ENST00000558246 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
AC087477.5-201ENST00000558246 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
AC087477.5-201ENST00000558246 LHX8Q68G74 356 aa13.28□□□□□ -0.28
AC087477.5-201ENST00000558246 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
AC087477.5-201ENST00000558246 ARAP1Q96P48 1450 aa13.28□□□□□ -0.28
AC087477.5-201ENST00000558246 CUL7Q14999 1698 aa13.26□□□□□ -0.29
AC087477.5-201ENST00000558246 FHAD1B1AJZ9 1412 aa13.25□□□□□ -0.29
AC087477.5-201ENST00000558246 TOPBP1Q92547 1522 aa13.24□□□□□ -0.29
AC087477.5-201ENST00000558246 RRBP1Q9P2E9 1410 aaKnown RBP13.24□□□□□ -0.29
AC087477.5-201ENST00000558246 IGF1RP08069 1367 aa13.24□□□□□ -0.29
AC087477.5-201ENST00000558246 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
AC087477.5-201ENST00000558246 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
AC087477.5-201ENST00000558246 EFCAB5A4FU69 1503 aa13.23□□□□□ -0.29
AC087477.5-201ENST00000558246 ABCA10Q8WWZ4 1543 aa13.23□□□□□ -0.29
AC087477.5-201ENST00000558246 CARMIL1Q5VZK9 1371 aa13.22□□□□□ -0.29
AC087477.5-201ENST00000558246 POTEIP0CG38 1075 aa13.22□□□□□ -0.29
AC087477.5-201ENST00000558246 ZNF608Q9ULD9 1512 aaPredicted RBP13.21□□□□□ -0.29
AC087477.5-201ENST00000558246 ZNF579Q8NAF0 562 aaKnown RBP13.2□□□□□ -0.3
AC087477.5-201ENST00000558246 ARHGAP35Q9NRY4 1499 aa13.2□□□□□ -0.3
AC087477.5-201ENST00000558246 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
AC087477.5-201ENST00000558246 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
AC087477.5-201ENST00000558246 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
AC087477.5-201ENST00000558246 DIEXFQ68CQ4 756 aaKnown RBP13.17□□□□□ -0.3
AC087477.5-201ENST00000558246 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.3
AC087477.5-201ENST00000558246 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
AC087477.5-201ENST00000558246 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
AC087477.5-201ENST00000558246 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
AC087477.5-201ENST00000558246 CTTNBP2Q8WZ74 1663 aa13.13□□□□□ -0.31
AC087477.5-201ENST00000558246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.13□□□□□ -0.31
AC087477.5-201ENST00000558246 DCBLD2Q96PD2 775 aa13.13□□□□□ -0.31
AC087477.5-201ENST00000558246 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
AC087477.5-201ENST00000558246 CCNB3Q8WWL7 1395 aa13.12□□□□□ -0.31
AC087477.5-201ENST00000558246 RIMBP3CA6NJZ7 1639 aa13.12□□□□□ -0.31
AC087477.5-201ENST00000558246 RIMBP3BA6NNM3 1639 aa13.12□□□□□ -0.31
AC087477.5-201ENST00000558246 RIMBP3Q9UFD9 1639 aa13.12□□□□□ -0.31
AC087477.5-201ENST00000558246 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
AC087477.5-201ENST00000558246 POLA1P09884 1462 aaPredicted RBP13.1□□□□□ -0.31
AC087477.5-201ENST00000558246 FYCO1Q9BQS8 1478 aa13.1□□□□□ -0.31
AC087477.5-201ENST00000558246 PELP1Q8IZL8 1130 aaKnown RBP13.1□□□□□ -0.31
AC087477.5-201ENST00000558246 FMN1Q68DA7 1419 aa13.09□□□□□ -0.31
AC087477.5-201ENST00000558246 LRRC9Q6ZRR7 1453 aa13.07□□□□□ -0.32
AC087477.5-201ENST00000558246 CHD1O14646 1710 aa13.07□□□□□ -0.32
AC087477.5-201ENST00000558246 TTBK1Q5TCY1 1321 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms