RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
CHD8-214ENST00000557727 ZNF608Q9ULD9 1512 aaPredicted RBP15.64■□□□□ 0.09
CHD8-214ENST00000557727 EIF4G3O43432 1585 aaKnown RBP15.62■□□□□ 0.09
CHD8-214ENST00000557727 SOGA1O94964 1423 aa15.61■□□□□ 0.09
CHD8-214ENST00000557727 ABCA10Q8WWZ4 1543 aa15.58■□□□□ 0.09
CHD8-214ENST00000557727 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
CHD8-214ENST00000557727 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.08
CHD8-214ENST00000557727 FOXD4L1Q9NU39 408 aa15.53■□□□□ 0.08
CHD8-214ENST00000557727 POTEHQ6S545 545 aa15.52■□□□□ 0.08
CHD8-214ENST00000557727 TDRD9Q8NDG6 1382 aaKnown RBP15.51■□□□□ 0.07
CHD8-214ENST00000557727 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
CHD8-214ENST00000557727 POLA2Q14181 598 aa15.47■□□□□ 0.07
CHD8-214ENST00000557727 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
CHD8-214ENST00000557727 GRIN2BQ13224 1484 aa15.43■□□□□ 0.06
CHD8-214ENST00000557727 RBM42Q9BTD8 480 aaKnown RBP15.42■□□□□ 0.06
CHD8-214ENST00000557727 CHD1O14646 1710 aa15.41■□□□□ 0.06
CHD8-214ENST00000557727 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
CHD8-214ENST00000557727 ERICH3Q5RHP9 1530 aa15.39■□□□□ 0.05
CHD8-214ENST00000557727 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
CHD8-214ENST00000557727 ADAMTS12P58397 1594 aa15.38■□□□□ 0.05
CHD8-214ENST00000557727 TRIM41Q8WV44 630 aa15.38■□□□□ 0.05
CHD8-214ENST00000557727 RUSC2Q8N2Y8 1516 aa15.38■□□□□ 0.05
CHD8-214ENST00000557727 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
CHD8-214ENST00000557727 SYNJ2O15056 1496 aa15.33■□□□□ 0.04
CHD8-214ENST00000557727 ATF5Q9Y2D1 282 aaPredicted RBP15.32■□□□□ 0.04
CHD8-214ENST00000557727 IGF1RP08069 1367 aa15.32■□□□□ 0.04
CHD8-214ENST00000557727 CUL7Q14999 1698 aa15.31■□□□□ 0.04
CHD8-214ENST00000557727 FHAD1B1AJZ9 1412 aa15.28■□□□□ 0.04
CHD8-214ENST00000557727 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
CHD8-214ENST00000557727 CLASP1Q7Z460 1538 aa15.23■□□□□ 0.03
CHD8-214ENST00000557727 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
CHD8-214ENST00000557727 ZBTB22O15209 634 aa15.22■□□□□ 0.03
CHD8-214ENST00000557727 NUP160Q12769 1436 aa15.21■□□□□ 0.03
CHD8-214ENST00000557727 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
CHD8-214ENST00000557727 PRXQ9BXM0 1461 aa15.2■□□□□ 0.02
CHD8-214ENST00000557727 CARMIL1Q5VZK9 1371 aa15.19■□□□□ 0.02
CHD8-214ENST00000557727 EEA1Q15075 1411 aa15.18■□□□□ 0.02
CHD8-214ENST00000557727 OSCARQ8IYS5 282 aa15.18■□□□□ 0.02
CHD8-214ENST00000557727 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
CHD8-214ENST00000557727 FBLN2P98095 1184 aa15.17■□□□□ 0.02
CHD8-214ENST00000557727 DNAJC5Q9H3Z4 198 aa15.17■□□□□ 0.02
CHD8-214ENST00000557727 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
CHD8-214ENST00000557727 SHROOM2Q13796 1616 aa15.14■□□□□ 0.01
CHD8-214ENST00000557727 ATXN8OSP0DMR3 200 aa15.12■□□□□ 0.01
CHD8-214ENST00000557727 KIF21BO75037 1637 aa15.11■□□□□ 0.01
CHD8-214ENST00000557727 CSRNP3Q8WYN3 585 aa15.11■□□□□ 0.01
CHD8-214ENST00000557727 CTTNBP2Q8WZ74 1663 aa15.09■□□□□ 0.01
CHD8-214ENST00000557727 RIMBP3CA6NJZ7 1639 aa15.07■□□□□ 0
CHD8-214ENST00000557727 RIMBP3BA6NNM3 1639 aa15.07■□□□□ 0
CHD8-214ENST00000557727 RIMBP3Q9UFD9 1639 aa15.07■□□□□ 0
CHD8-214ENST00000557727 KIAA0586Q9BVV6 1533 aa15.07■□□□□ 0
CHD8-214ENST00000557727 CHRDL2Q6WN34 429 aa15.06■□□□□ 0
CHD8-214ENST00000557727 ARHGEF11O15085 1522 aa15.06■□□□□ 0
CHD8-214ENST00000557727 FAM9AQ8IZU1 332 aaPredicted RBP15.05■□□□□ -0
CHD8-214ENST00000557727 AKT1S1Q96B36 256 aa15.05■□□□□ -0
CHD8-214ENST00000557727 ERCC6L2Q5T890 1561 aa15.05■□□□□ -0
CHD8-214ENST00000557727 IQGAP2Q13576 1575 aa15.03■□□□□ -0
CHD8-214ENST00000557727 UGGT2Q9NYU1 1516 aa14.97□□□□□ -0.01
CHD8-214ENST00000557727 ARAP1Q96P48 1450 aa14.96□□□□□ -0.01
CHD8-214ENST00000557727 JPH4Q96JJ6 628 aa14.95□□□□□ -0.02
CHD8-214ENST00000557727 DISP1Q96F81 1524 aa14.95□□□□□ -0.02
CHD8-214ENST00000557727 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
CHD8-214ENST00000557727 PRG4Q92954 1404 aaPredicted RBP14.94□□□□□ -0.02
CHD8-214ENST00000557727 KIAA0556O60303 1618 aa14.91□□□□□ -0.02
CHD8-214ENST00000557727 SAMD9Q5K651 1589 aa14.9□□□□□ -0.02
CHD8-214ENST00000557727 REM2Q8IYK8 340 aaPredicted RBP14.88□□□□□ -0.03
CHD8-214ENST00000557727 EHMT2Q96KQ7 1210 aa14.82□□□□□ -0.04
CHD8-214ENST00000557727 CARMIL2Q6F5E8 1435 aa14.82□□□□□ -0.04
CHD8-214ENST00000557727 EFCAB5A4FU69 1503 aa14.81□□□□□ -0.04
CHD8-214ENST00000557727 TNIKQ9UKE5 1360 aa14.8□□□□□ -0.04
CHD8-214ENST00000557727 CYB5RLQ6IPT4 315 aa14.79□□□□□ -0.04
CHD8-214ENST00000557727 ADCY10Q96PN6 1610 aa14.79□□□□□ -0.04
CHD8-214ENST00000557727 ARHGAP35Q9NRY4 1499 aa14.78□□□□□ -0.04
CHD8-214ENST00000557727 UBTFP17480 764 aaKnown RBP14.78□□□□□ -0.04
CHD8-214ENST00000557727 PTPRGP23470 1445 aa14.75□□□□□ -0.05
CHD8-214ENST00000557727 ABCA8O94911 1581 aa14.75□□□□□ -0.05
CHD8-214ENST00000557727 LOC105371045A0A1W2PR82 267 aa14.74□□□□□ -0.05
CHD8-214ENST00000557727 FHOD3Q2V2M9 1422 aa14.74□□□□□ -0.05
CHD8-214ENST00000557727 UHRF1BP1LA0JNW5 1464 aa14.72□□□□□ -0.05
CHD8-214ENST00000557727 SPDYE2BA6NHP3 402 aa14.72□□□□□ -0.05
CHD8-214ENST00000557727 SPDYE6P0CI01 402 aa14.72□□□□□ -0.05
CHD8-214ENST00000557727 SPDYE2Q495Y8 402 aa14.72□□□□□ -0.05
CHD8-214ENST00000557727 ABCC2Q92887 1545 aa14.71□□□□□ -0.05
CHD8-214ENST00000557727 PLB1Q6P1J6 1458 aa14.71□□□□□ -0.05
CHD8-214ENST00000557727 PITPNM1O00562 1244 aa14.7□□□□□ -0.06
CHD8-214ENST00000557727 UACAQ9BZF9 1416 aa14.69□□□□□ -0.06
CHD8-214ENST00000557727 RANGAP1P46060 587 aaPredicted RBP14.69□□□□□ -0.06
CHD8-214ENST00000557727 P3H3Q8IVL6 736 aa14.69□□□□□ -0.06
CHD8-214ENST00000557727 RAPGEF6Q8TEU7 1601 aa14.68□□□□□ -0.06
CHD8-214ENST00000557727 PIP4P2Q8N4L2 257 aa14.68□□□□□ -0.06
CHD8-214ENST00000557727 CLIP1P30622 1438 aa14.67□□□□□ -0.06
CHD8-214ENST00000557727 CEP162Q5TB80 1403 aa14.67□□□□□ -0.06
CHD8-214ENST00000557727 KDM5BQ9UGL1 1544 aa14.66□□□□□ -0.06
CHD8-214ENST00000557727 LRRIQ1Q96JM4 1722 aa14.66□□□□□ -0.06
CHD8-214ENST00000557727 ZCCHC11Q5TAX3 1644 aaKnown RBP14.66□□□□□ -0.06
CHD8-214ENST00000557727 TTBK1Q5TCY1 1321 aaPredicted RBP14.64□□□□□ -0.07
CHD8-214ENST00000557727 NUP153P49790 1475 aaKnown RBP14.63□□□□□ -0.07
CHD8-214ENST00000557727 MAPKBP1O60336 1514 aa14.63□□□□□ -0.07
CHD8-214ENST00000557727 FXR2P51116 673 aaKnown RBP eCLIP14.63□□□□□ -0.072e-11■■■■□ 23.7
CHD8-214ENST00000557727 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms