RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 DIP2BQ9P265 1576 aa17.52■□□□□ 0.39
PABPN1-208ENST00000557702 ADAMTS12P58397 1594 aa17.5■□□□□ 0.39
PABPN1-208ENST00000557702 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
PABPN1-208ENST00000557702 ADGRL1O94910 1474 aa17.46■□□□□ 0.39
PABPN1-208ENST00000557702 FBXO41Q8TF61 875 aa17.45■□□□□ 0.38
PABPN1-208ENST00000557702 TSPOAP1O95153 1857 aa17.44■□□□□ 0.38
PABPN1-208ENST00000557702 HECW2Q9P2P5 1572 aa17.44■□□□□ 0.38
PABPN1-208ENST00000557702 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
PABPN1-208ENST00000557702 ADCY10Q96PN6 1610 aa17.39■□□□□ 0.37
PABPN1-208ENST00000557702 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
PABPN1-208ENST00000557702 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
PABPN1-208ENST00000557702 COL17A1Q9UMD9 1497 aaPredicted RBP17.23■□□□□ 0.35
PABPN1-208ENST00000557702 PLB1Q6P1J6 1458 aa17.21■□□□□ 0.35
PABPN1-208ENST00000557702 PTPRGP23470 1445 aa17.21■□□□□ 0.34
PABPN1-208ENST00000557702 ASXL2Q76L83 1435 aa17.21■□□□□ 0.34
PABPN1-208ENST00000557702 GLI2P10070 1586 aa17.2■□□□□ 0.34
PABPN1-208ENST00000557702 PPRC1Q5VV67 1664 aaKnown RBP17.2■□□□□ 0.34
PABPN1-208ENST00000557702 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
PABPN1-208ENST00000557702 KIAA0586Q9BVV6 1533 aa17.18■□□□□ 0.34
PABPN1-208ENST00000557702 LMTK3Q96Q04 1460 aa17.18■□□□□ 0.34
PABPN1-208ENST00000557702 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
PABPN1-208ENST00000557702 ABCC2Q92887 1545 aa17.16■□□□□ 0.34
PABPN1-208ENST00000557702 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
PABPN1-208ENST00000557702 TEX14Q8IWB6 1497 aa17.13■□□□□ 0.33
PABPN1-208ENST00000557702 TNIKQ9UKE5 1360 aa17.1■□□□□ 0.33
PABPN1-208ENST00000557702 EPRSP07814 1512 aaKnown RBP17.08■□□□□ 0.32
PABPN1-208ENST00000557702 CARMIL2Q6F5E8 1435 aa17.06■□□□□ 0.32
PABPN1-208ENST00000557702 UHRF1BP1LA0JNW5 1464 aa17.05■□□□□ 0.32
PABPN1-208ENST00000557702 SOCS7O14512 581 aa17.05■□□□□ 0.32
PABPN1-208ENST00000557702 MAP3K4Q9Y6R4 1608 aa17.05■□□□□ 0.32
PABPN1-208ENST00000557702 UACAQ9BZF9 1416 aa17.03■□□□□ 0.32
PABPN1-208ENST00000557702 CUL7Q14999 1698 aa17.02■□□□□ 0.32
PABPN1-208ENST00000557702 ILDR2Q71H61 639 aa17■□□□□ 0.31
PABPN1-208ENST00000557702 IGF1RP08069 1367 aa17■□□□□ 0.31
PABPN1-208ENST00000557702 KDM5BQ9UGL1 1544 aa16.97■□□□□ 0.31
PABPN1-208ENST00000557702 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.31
PABPN1-208ENST00000557702 PTPRMP28827 1452 aa16.93■□□□□ 0.3
PABPN1-208ENST00000557702 CD109Q6YHK3 1445 aa16.92■□□□□ 0.3
PABPN1-208ENST00000557702 MAGI3Q5TCQ9 1506 aa16.91■□□□□ 0.3
PABPN1-208ENST00000557702 KIF21BO75037 1637 aa16.9■□□□□ 0.3
PABPN1-208ENST00000557702 CERKQ8TCT0 537 aa16.9■□□□□ 0.3
PABPN1-208ENST00000557702 KIF27Q86VH2 1401 aa16.89■□□□□ 0.29
PABPN1-208ENST00000557702 WDR7Q9Y4E6 1490 aa16.89■□□□□ 0.29
PABPN1-208ENST00000557702 ZCCHC11Q5TAX3 1644 aaKnown RBP16.88■□□□□ 0.29
PABPN1-208ENST00000557702 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
PABPN1-208ENST00000557702 KCNH8Q96L42 1107 aa16.87■□□□□ 0.29
PABPN1-208ENST00000557702 PCF11O94913 1555 aaKnown RBP16.86■□□□□ 0.29
PABPN1-208ENST00000557702 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
PABPN1-208ENST00000557702 DISP1Q96F81 1524 aa16.85■□□□□ 0.29
PABPN1-208ENST00000557702 IQGAP2Q13576 1575 aa16.85■□□□□ 0.29
PABPN1-208ENST00000557702 ADAMTSL3P82987 1691 aa16.83■□□□□ 0.28
PABPN1-208ENST00000557702 CFAP43Q8NDM7 1665 aa16.8■□□□□ 0.28
PABPN1-208ENST00000557702 ARID4BQ4LE39 1312 aaPredicted RBP16.79■□□□□ 0.28
PABPN1-208ENST00000557702 HSPA2P54652 639 aa16.79■□□□□ 0.28
PABPN1-208ENST00000557702 ARAP3Q8WWN8 1544 aa16.79■□□□□ 0.28
PABPN1-208ENST00000557702 UGGT2Q9NYU1 1516 aa16.74■□□□□ 0.27
PABPN1-208ENST00000557702 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
PABPN1-208ENST00000557702 RAPGEF3O95398 923 aa16.72■□□□□ 0.27
PABPN1-208ENST00000557702 MADDQ8WXG6 1647 aa16.7■□□□□ 0.26
PABPN1-208ENST00000557702 BCORL1Q5H9F3 1711 aa16.7■□□□□ 0.26
PABPN1-208ENST00000557702 KIAA0556O60303 1618 aa16.7■□□□□ 0.26
PABPN1-208ENST00000557702 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
PABPN1-208ENST00000557702 SPATA31D1Q6ZQQ2 1576 aa16.66■□□□□ 0.26
PABPN1-208ENST00000557702 RIMS1Q86UR5 1692 aaKnown RBP16.62■□□□□ 0.25
PABPN1-208ENST00000557702 ABCA8O94911 1581 aa16.61■□□□□ 0.25
PABPN1-208ENST00000557702 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
PABPN1-208ENST00000557702 RAPGEF2Q9Y4G8 1499 aa16.6■□□□□ 0.25
PABPN1-208ENST00000557702 NEO1Q92859 1461 aa16.59■□□□□ 0.25
PABPN1-208ENST00000557702 ARID3CA6NKF2 412 aa16.58■□□□□ 0.24
PABPN1-208ENST00000557702 FAM9AQ8IZU1 332 aaPredicted RBP16.58■□□□□ 0.24
PABPN1-208ENST00000557702 GOLGA3Q08378 1498 aa16.57■□□□□ 0.24
PABPN1-208ENST00000557702 POGZQ7Z3K3 1410 aa16.57■□□□□ 0.24
PABPN1-208ENST00000557702 YEATS2Q9ULM3 1422 aa16.54■□□□□ 0.24
PABPN1-208ENST00000557702 ABCA9Q8IUA7 1624 aa16.53■□□□□ 0.24
PABPN1-208ENST00000557702 FRMPD1Q5SYB0 1578 aa16.52■□□□□ 0.24
PABPN1-208ENST00000557702 FANCAO15360 1455 aa16.52■□□□□ 0.23
PABPN1-208ENST00000557702 ATP10BO94823 1461 aa16.52■□□□□ 0.23
PABPN1-208ENST00000557702 MLECQ14165 292 aa16.51■□□□□ 0.23
PABPN1-208ENST00000557702 ARHGEF40Q8TER5 1519 aa16.5■□□□□ 0.23
PABPN1-208ENST00000557702 AKNAQ7Z591 1439 aa16.49■□□□□ 0.23
PABPN1-208ENST00000557702 DENND4BO75064 1496 aaPredicted RBP16.48■□□□□ 0.23
PABPN1-208ENST00000557702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
PABPN1-208ENST00000557702 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
PABPN1-208ENST00000557702 FHOD3Q2V2M9 1422 aa16.45■□□□□ 0.22
PABPN1-208ENST00000557702 CEBPAP49715 358 aaPredicted RBP16.42■□□□□ 0.22
PABPN1-208ENST00000557702 TTC37Q6PGP7 1564 aa16.42■□□□□ 0.22
PABPN1-208ENST00000557702 STRCQ7RTU9 1775 aa16.41■□□□□ 0.22
PABPN1-208ENST00000557702 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
PABPN1-208ENST00000557702 PTPRTO14522 1441 aa16.41■□□□□ 0.22
PABPN1-208ENST00000557702 PREX1Q8TCU6 1659 aa16.4■□□□□ 0.22
PABPN1-208ENST00000557702 FER1L4A9Z1Z3 1794 aa16.4■□□□□ 0.22
PABPN1-208ENST00000557702 CTTNBP2Q8WZ74 1663 aa16.4■□□□□ 0.22
PABPN1-208ENST00000557702 RICTORQ6R327 1708 aa16.39■□□□□ 0.21
PABPN1-208ENST00000557702 EFCAB5A4FU69 1503 aa16.39■□□□□ 0.21
PABPN1-208ENST00000557702 ZFYVE16Q7Z3T8 1539 aa16.39■□□□□ 0.21
PABPN1-208ENST00000557702 UHRF1BP1Q6BDS2 1440 aa16.38■□□□□ 0.21
PABPN1-208ENST00000557702 IQSEC2Q5JU85 1478 aa16.38■□□□□ 0.21
PABPN1-208ENST00000557702 MAGI2Q86UL8 1455 aa16.38■□□□□ 0.21
PABPN1-208ENST00000557702 ZMYM4Q5VZL5 1548 aa16.36■□□□□ 0.21
PABPN1-208ENST00000557702 SETD1BQ9UPS6 1966 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms