RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
SUPT16H-208ENST00000557652 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
SUPT16H-208ENST00000557652 GOLGA3Q08378 1498 aa23.17■■□□□ 1.3
SUPT16H-208ENST00000557652 IQGAP2Q13576 1575 aa23.17■■□□□ 1.3
SUPT16H-208ENST00000557652 JPH4Q96JJ6 628 aa23.07■■□□□ 1.28
SUPT16H-208ENST00000557652 UGGT2Q9NYU1 1516 aa23.06■■□□□ 1.28
SUPT16H-208ENST00000557652 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
SUPT16H-208ENST00000557652 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
SUPT16H-208ENST00000557652 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
SUPT16H-208ENST00000557652 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
SUPT16H-208ENST00000557652 CARMIL2Q6F5E8 1435 aa23■■□□□ 1.27
SUPT16H-208ENST00000557652 PRG4Q92954 1404 aaPredicted RBP22.99■■□□□ 1.27
SUPT16H-208ENST00000557652 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
SUPT16H-208ENST00000557652 TNIKQ9UKE5 1360 aa22.94■■□□□ 1.26
SUPT16H-208ENST00000557652 EFCAB5A4FU69 1503 aa22.92■■□□□ 1.26
SUPT16H-208ENST00000557652 KIAA0556O60303 1618 aa22.92■■□□□ 1.26
SUPT16H-208ENST00000557652 SAMD9Q5K651 1589 aa22.91■■□□□ 1.26
SUPT16H-208ENST00000557652 DISP1Q96F81 1524 aa22.91■■□□□ 1.26
SUPT16H-208ENST00000557652 ERCC6L2Q5T890 1561 aa22.88■■□□□ 1.25
SUPT16H-208ENST00000557652 ARAP1Q96P48 1450 aa22.85■■□□□ 1.25
SUPT16H-208ENST00000557652 PTPRGP23470 1445 aa22.79■■□□□ 1.24
SUPT16H-208ENST00000557652 EHMT2Q96KQ7 1210 aa22.77■■□□□ 1.24
SUPT16H-208ENST00000557652 ARHGAP35Q9NRY4 1499 aa22.73■■□□□ 1.23
SUPT16H-208ENST00000557652 CLIP1P30622 1438 aa22.73■■□□□ 1.23
SUPT16H-208ENST00000557652 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
SUPT16H-208ENST00000557652 LOC105371045A0A1W2PR82 267 aa22.7■■□□□ 1.22
SUPT16H-208ENST00000557652 UHRF1BP1LA0JNW5 1464 aa22.7■■□□□ 1.22
SUPT16H-208ENST00000557652 CEP162Q5TB80 1403 aa22.69■■□□□ 1.22
SUPT16H-208ENST00000557652 FMN1Q68DA7 1419 aa22.68■■□□□ 1.22
SUPT16H-208ENST00000557652 UACAQ9BZF9 1416 aa22.66■■□□□ 1.22
SUPT16H-208ENST00000557652 FHOD3Q2V2M9 1422 aa22.65■■□□□ 1.22
SUPT16H-208ENST00000557652 ABCA8O94911 1581 aa22.65■■□□□ 1.22
SUPT16H-208ENST00000557652 ABCC2Q92887 1545 aa22.65■■□□□ 1.22
SUPT16H-208ENST00000557652 RANGAP1P46060 587 aaPredicted RBP22.63■■□□□ 1.21
SUPT16H-208ENST00000557652 ADCY10Q96PN6 1610 aa22.62■■□□□ 1.21
SUPT16H-208ENST00000557652 RAPGEF6Q8TEU7 1601 aa22.61■■□□□ 1.21
SUPT16H-208ENST00000557652 P3H3Q8IVL6 736 aa22.61■■□□□ 1.21
SUPT16H-208ENST00000557652 PLB1Q6P1J6 1458 aa22.57■■□□□ 1.2
SUPT16H-208ENST00000557652 KDM5BQ9UGL1 1544 aa22.55■■□□□ 1.2
SUPT16H-208ENST00000557652 NPM1P06748 294 aaKnown RBP eCLIP22.54■■□□□ 1.2
SUPT16H-208ENST00000557652 HECW1Q76N89 1606 aa22.53■■□□□ 1.2
SUPT16H-208ENST00000557652 TTBK1Q5TCY1 1321 aaPredicted RBP22.53■■□□□ 1.2
SUPT16H-208ENST00000557652 MAPKBP1O60336 1514 aa22.51■■□□□ 1.19
SUPT16H-208ENST00000557652 CASKIN1Q8WXD9 1431 aa22.5■■□□□ 1.19
SUPT16H-208ENST00000557652 AEBP2Q6ZN18 517 aaPredicted RBP22.5■■□□□ 1.19
SUPT16H-208ENST00000557652 FYCO1Q9BQS8 1478 aa22.49■■□□□ 1.19
SUPT16H-208ENST00000557652 ZCCHC11Q5TAX3 1644 aaKnown RBP22.48■■□□□ 1.19
SUPT16H-208ENST00000557652 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
SUPT16H-208ENST00000557652 PCF11O94913 1555 aaKnown RBP22.44■■□□□ 1.18
SUPT16H-208ENST00000557652 VPS8Q8N3P4 1428 aa22.44■■□□□ 1.18
SUPT16H-208ENST00000557652 CCDC18Q5T9S5 1454 aa22.43■■□□□ 1.18
SUPT16H-208ENST00000557652 ATP10BO94823 1461 aa22.41■■□□□ 1.18
SUPT16H-208ENST00000557652 EPRSP07814 1512 aaKnown RBP22.4■■□□□ 1.18
SUPT16H-208ENST00000557652 LRRIQ1Q96JM4 1722 aa22.36■■□□□ 1.17
SUPT16H-208ENST00000557652 ASXL2Q76L83 1435 aa22.35■■□□□ 1.17
SUPT16H-208ENST00000557652 CDK11AQ9UQ88 783 aaPredicted RBP22.35■■□□□ 1.17
SUPT16H-208ENST00000557652 WDR7Q9Y4E6 1490 aa22.34■■□□□ 1.17
SUPT16H-208ENST00000557652 MAP3K1Q13233 1512 aa22.31■■□□□ 1.16
SUPT16H-208ENST00000557652 ABCC10Q5T3U5 1492 aa22.29■■□□□ 1.16
SUPT16H-208ENST00000557652 ATP1B4Q9UN42 357 aaPredicted RBP22.29■■□□□ 1.16
SUPT16H-208ENST00000557652 CDK13Q14004 1512 aaKnown RBP22.29■■□□□ 1.16
SUPT16H-208ENST00000557652 GLI2P10070 1586 aa22.29■■□□□ 1.16
SUPT16H-208ENST00000557652 CFAP43Q8NDM7 1665 aa22.28■■□□□ 1.16
SUPT16H-208ENST00000557652 PLEKHD1A6NEE1 506 aa22.28■■□□□ 1.16
SUPT16H-208ENST00000557652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
SUPT16H-208ENST00000557652 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
SUPT16H-208ENST00000557652 KIF13AQ9H1H9 1805 aa22.27■■□□□ 1.16
SUPT16H-208ENST00000557652 DIP2BQ9P265 1576 aa22.27■■□□□ 1.16
SUPT16H-208ENST00000557652 TROQ12816 1431 aaPredicted RBP22.23■■□□□ 1.15
SUPT16H-208ENST00000557652 TIAM1Q13009 1591 aa22.22■■□□□ 1.15
SUPT16H-208ENST00000557652 ARID3CA6NKF2 412 aa22.2■■□□□ 1.14
SUPT16H-208ENST00000557652 APLP2Q06481 763 aa22.19■■□□□ 1.14
SUPT16H-208ENST00000557652 ABCA9Q8IUA7 1624 aa22.19■■□□□ 1.14
SUPT16H-208ENST00000557652 KIF14Q15058 1648 aa22.18■■□□□ 1.14
SUPT16H-208ENST00000557652 EHBP1L1Q8N3D4 1523 aa22.18■■□□□ 1.14
SUPT16H-208ENST00000557652 MAP3K4Q9Y6R4 1608 aa22.17■■□□□ 1.14
SUPT16H-208ENST00000557652 MTUS2Q5JR59 1369 aa22.14■■□□□ 1.14
SUPT16H-208ENST00000557652 FAM69CQ0P6D2 419 aa22.14■■□□□ 1.13
SUPT16H-208ENST00000557652 TRHP20396 242 aaPredicted RBP22.13■■□□□ 1.13
SUPT16H-208ENST00000557652 MAGI3Q5TCQ9 1506 aa22.11■■□□□ 1.13
SUPT16H-208ENST00000557652 LRRC9Q6ZRR7 1453 aa22.1■■□□□ 1.13
SUPT16H-208ENST00000557652 SUPT6HQ7KZ85 1726 aaKnown RBP22.1■■□□□ 1.13
SUPT16H-208ENST00000557652 KCNH8Q96L42 1107 aa22.1■■□□□ 1.13
SUPT16H-208ENST00000557652 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.09■■□□□ 1.13
SUPT16H-208ENST00000557652 ARAP3Q8WWN8 1544 aa22.09■■□□□ 1.13
SUPT16H-208ENST00000557652 MYO5CQ9NQX4 1742 aa22.08■■□□□ 1.12
SUPT16H-208ENST00000557652 TEX14Q8IWB6 1497 aa22.08■■□□□ 1.12
SUPT16H-208ENST00000557652 CD109Q6YHK3 1445 aa22.06■■□□□ 1.12
SUPT16H-208ENST00000557652 TTC37Q6PGP7 1564 aa22.05■■□□□ 1.12
SUPT16H-208ENST00000557652 TSPOAP1O95153 1857 aa22.05■■□□□ 1.12
SUPT16H-208ENST00000557652 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
SUPT16H-208ENST00000557652 PPRC1Q5VV67 1664 aaKnown RBP22.03■■□□□ 1.12
SUPT16H-208ENST00000557652 PHLDB1Q86UU1 1377 aa22.02■■□□□ 1.12
SUPT16H-208ENST00000557652 ITSN2Q9NZM3 1697 aa22.02■■□□□ 1.12
SUPT16H-208ENST00000557652 PREX2Q70Z35 1606 aa22■■□□□ 1.11
SUPT16H-208ENST00000557652 CDC42BPAQ5VT25 1732 aa22■■□□□ 1.11
SUPT16H-208ENST00000557652 PLCH2O75038 1416 aa21.99■■□□□ 1.11
SUPT16H-208ENST00000557652 NEO1Q92859 1461 aa21.98■■□□□ 1.11
SUPT16H-208ENST00000557652 NCOA2Q15596 1464 aa21.97■■□□□ 1.11
SUPT16H-208ENST00000557652 CDC42BPBQ9Y5S2 1711 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms