RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
APEX1-216ENST00000557159 MIER1Q8N108 512 aa18.53■□□□□ 0.56
APEX1-216ENST00000557159 GRIN2BQ13224 1484 aa18.5■□□□□ 0.55
APEX1-216ENST00000557159 IGF1RP08069 1367 aa18.48■□□□□ 0.55
APEX1-216ENST00000557159 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
APEX1-216ENST00000557159 PBRM1Q86U86 1689 aa18.43■□□□□ 0.54
APEX1-216ENST00000557159 YTHDC1Q96MU7 727 aaKnown RBP18.43■□□□□ 0.54
APEX1-216ENST00000557159 TTBK1Q5TCY1 1321 aaPredicted RBP18.42■□□□□ 0.54
APEX1-216ENST00000557159 SNAPC4Q5SXM2 1469 aa18.41■□□□□ 0.54
APEX1-216ENST00000557159 MAGI1Q96QZ7 1491 aaPredicted RBP18.41■□□□□ 0.54
APEX1-216ENST00000557159 VPS8Q8N3P4 1428 aa18.38■□□□□ 0.53
APEX1-216ENST00000557159 FHAD1B1AJZ9 1412 aa18.36■□□□□ 0.53
APEX1-216ENST00000557159 PRXQ9BXM0 1461 aa18.36■□□□□ 0.53
APEX1-216ENST00000557159 CARMIL1Q5VZK9 1371 aa18.35■□□□□ 0.53
APEX1-216ENST00000557159 RAPGEF2Q9Y4G8 1499 aa18.35■□□□□ 0.53
APEX1-216ENST00000557159 CLIP1P30622 1438 aa18.35■□□□□ 0.53
APEX1-216ENST00000557159 SYNJ2O15056 1496 aa18.34■□□□□ 0.53
APEX1-216ENST00000557159 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
APEX1-216ENST00000557159 CHMP7Q8WUX9 453 aaPredicted RBP18.33■□□□□ 0.53
APEX1-216ENST00000557159 CUL7Q14999 1698 aa18.32■□□□□ 0.52
APEX1-216ENST00000557159 FBLN2P98095 1184 aa18.31■□□□□ 0.52
APEX1-216ENST00000557159 SUPT16HQ9Y5B9 1047 aaKnown RBP18.29■□□□□ 0.52
APEX1-216ENST00000557159 GRIN2AQ12879 1464 aa18.27■□□□□ 0.51
APEX1-216ENST00000557159 CHD1O14646 1710 aa18.24■□□□□ 0.51
APEX1-216ENST00000557159 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
APEX1-216ENST00000557159 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
APEX1-216ENST00000557159 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
APEX1-216ENST00000557159 APLP2Q06481 763 aa18.2■□□□□ 0.5
APEX1-216ENST00000557159 ANP32EQ9BTT0 268 aa18.19■□□□□ 0.5
APEX1-216ENST00000557159 NUP160Q12769 1436 aa18.18■□□□□ 0.5
APEX1-216ENST00000557159 TSHZ2Q9NRE2 1034 aa18.16■□□□□ 0.5
APEX1-216ENST00000557159 CEP170Q5SW79 1584 aa18.14■□□□□ 0.49
APEX1-216ENST00000557159 RRBP1Q9P2E9 1410 aaKnown RBP18.1■□□□□ 0.49
APEX1-216ENST00000557159 KIAA0586Q9BVV6 1533 aa18.1■□□□□ 0.49
APEX1-216ENST00000557159 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.48
APEX1-216ENST00000557159 ARAP1Q96P48 1450 aa18.05■□□□□ 0.48
APEX1-216ENST00000557159 JPH4Q96JJ6 628 aa18.04■□□□□ 0.48
APEX1-216ENST00000557159 IQGAP2Q13576 1575 aa18.01■□□□□ 0.47
APEX1-216ENST00000557159 CTTNBP2Q8WZ74 1663 aa18.01■□□□□ 0.47
APEX1-216ENST00000557159 RANGAP1P46060 587 aaPredicted RBP18■□□□□ 0.47
APEX1-216ENST00000557159 ARHGAP35Q9NRY4 1499 aa17.98■□□□□ 0.47
APEX1-216ENST00000557159 SHROOM2Q13796 1616 aa17.97■□□□□ 0.47
APEX1-216ENST00000557159 UGGT2Q9NYU1 1516 aa17.94■□□□□ 0.46
APEX1-216ENST00000557159 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
APEX1-216ENST00000557159 PRG4Q92954 1404 aaPredicted RBP17.93■□□□□ 0.46
APEX1-216ENST00000557159 MAP3K1Q13233 1512 aa17.93■□□□□ 0.46
APEX1-216ENST00000557159 BCL11AQ9H165 835 aa17.91■□□□□ 0.46
APEX1-216ENST00000557159 DISP1Q96F81 1524 aa17.89■□□□□ 0.45
APEX1-216ENST00000557159 CCNB3Q8WWL7 1395 aa17.88■□□□□ 0.45
APEX1-216ENST00000557159 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
APEX1-216ENST00000557159 CARMIL2Q6F5E8 1435 aa17.88■□□□□ 0.45
APEX1-216ENST00000557159 ERCC6L2Q5T890 1561 aa17.87■□□□□ 0.45
APEX1-216ENST00000557159 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
APEX1-216ENST00000557159 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
APEX1-216ENST00000557159 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
APEX1-216ENST00000557159 EFCAB5A4FU69 1503 aa17.86■□□□□ 0.45
APEX1-216ENST00000557159 MAPKBP1O60336 1514 aa17.86■□□□□ 0.45
APEX1-216ENST00000557159 TIMELESSQ9UNS1 1208 aa17.84■□□□□ 0.45
APEX1-216ENST00000557159 SAMD9Q5K651 1589 aa17.84■□□□□ 0.45
APEX1-216ENST00000557159 KIAA0556O60303 1618 aa17.83■□□□□ 0.45
APEX1-216ENST00000557159 P3H3Q8IVL6 736 aa17.82■□□□□ 0.44
APEX1-216ENST00000557159 CCER2I3L3R5 266 aa17.8■□□□□ 0.44
APEX1-216ENST00000557159 KANK4Q5T7N3 995 aaPredicted RBP17.8■□□□□ 0.44
APEX1-216ENST00000557159 TIAM1Q13009 1591 aa17.78■□□□□ 0.44
APEX1-216ENST00000557159 PTPRGP23470 1445 aa17.77■□□□□ 0.44
APEX1-216ENST00000557159 FHOD3Q2V2M9 1422 aa17.77■□□□□ 0.43
APEX1-216ENST00000557159 RBM19Q9Y4C8 960 aaKnown RBP17.75■□□□□ 0.43
APEX1-216ENST00000557159 FKBP8Q14318 412 aa17.75■□□□□ 0.43
APEX1-216ENST00000557159 RAB3GAP2Q9H2M9 1393 aa17.74■□□□□ 0.43
APEX1-216ENST00000557159 NEFLP07196 543 aa17.74■□□□□ 0.43
APEX1-216ENST00000557159 FMN1Q68DA7 1419 aa17.73■□□□□ 0.43
APEX1-216ENST00000557159 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
APEX1-216ENST00000557159 FYCO1Q9BQS8 1478 aa17.72■□□□□ 0.43
APEX1-216ENST00000557159 PPP1R15AO75807 674 aaPredicted RBP17.72■□□□□ 0.43
APEX1-216ENST00000557159 SETD5Q9C0A6 1442 aa17.72■□□□□ 0.43
APEX1-216ENST00000557159 LRRC9Q6ZRR7 1453 aa17.71■□□□□ 0.43
APEX1-216ENST00000557159 CASKIN1Q8WXD9 1431 aa17.71■□□□□ 0.43
APEX1-216ENST00000557159 TRHP20396 242 aaPredicted RBP17.7■□□□□ 0.42
APEX1-216ENST00000557159 KCNH8Q96L42 1107 aa17.7■□□□□ 0.42
APEX1-216ENST00000557159 CFAP43Q8NDM7 1665 aa17.69■□□□□ 0.42
APEX1-216ENST00000557159 FANCIQ9NVI1 1328 aa17.67■□□□□ 0.42
APEX1-216ENST00000557159 PLB1Q6P1J6 1458 aa17.66■□□□□ 0.42
APEX1-216ENST00000557159 UACAQ9BZF9 1416 aa17.66■□□□□ 0.42
APEX1-216ENST00000557159 PCF11O94913 1555 aaKnown RBP17.66■□□□□ 0.42
APEX1-216ENST00000557159 MYT1LQ9UL68 1186 aa17.63■□□□□ 0.41
APEX1-216ENST00000557159 ABCA8O94911 1581 aa17.63■□□□□ 0.41
APEX1-216ENST00000557159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.62■□□□□ 0.41
APEX1-216ENST00000557159 UHRF1BP1LA0JNW5 1464 aa17.62■□□□□ 0.41
APEX1-216ENST00000557159 ERICH6BQ5W0A0 696 aa17.61■□□□□ 0.41
APEX1-216ENST00000557159 BCANQ96GW7 911 aa17.61■□□□□ 0.41
APEX1-216ENST00000557159 ABCC2Q92887 1545 aa17.6■□□□□ 0.41
APEX1-216ENST00000557159 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
APEX1-216ENST00000557159 ADCY10Q96PN6 1610 aa17.59■□□□□ 0.41
APEX1-216ENST00000557159 RAPGEF6Q8TEU7 1601 aa17.58■□□□□ 0.41
APEX1-216ENST00000557159 ANP32CO43423 234 aa17.58■□□□□ 0.4
APEX1-216ENST00000557159 NUP153P49790 1475 aaKnown RBP17.57■□□□□ 0.4
APEX1-216ENST00000557159 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
APEX1-216ENST00000557159 KDM5BQ9UGL1 1544 aa17.54■□□□□ 0.4
APEX1-216ENST00000557159 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
APEX1-216ENST00000557159 ATP10BO94823 1461 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms