RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 MAGI1Q96QZ7 1491 aaPredicted RBP16.58■□□□□ 0.24
MARK3-211ENST00000556744 SNAPC4Q5SXM2 1469 aa16.55■□□□□ 0.24
MARK3-211ENST00000556744 ATXN8OSP0DMR3 200 aa16.55■□□□□ 0.24
MARK3-211ENST00000556744 CHD1O14646 1710 aa16.55■□□□□ 0.24
MARK3-211ENST00000556744 PBRM1Q86U86 1689 aa16.52■□□□□ 0.23
MARK3-211ENST00000556744 SYNJ2O15056 1496 aa16.51■□□□□ 0.23
MARK3-211ENST00000556744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.239e-9■■□□□ 14.3
MARK3-211ENST00000556744 FBLN2P98095 1184 aa16.46■□□□□ 0.23
MARK3-211ENST00000556744 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.23
MARK3-211ENST00000556744 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
MARK3-211ENST00000556744 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
MARK3-211ENST00000556744 RIMBP3CA6NJZ7 1639 aa16.41■□□□□ 0.22
MARK3-211ENST00000556744 RIMBP3BA6NNM3 1639 aa16.41■□□□□ 0.22
MARK3-211ENST00000556744 RIMBP3Q9UFD9 1639 aa16.41■□□□□ 0.22
MARK3-211ENST00000556744 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
MARK3-211ENST00000556744 FHAD1B1AJZ9 1412 aa16.41■□□□□ 0.22
MARK3-211ENST00000556744 ADAMTS12P58397 1594 aa16.41■□□□□ 0.22
MARK3-211ENST00000556744 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
MARK3-211ENST00000556744 NUP160Q12769 1436 aa16.36■□□□□ 0.21
MARK3-211ENST00000556744 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
MARK3-211ENST00000556744 IGF1RP08069 1367 aa16.35■□□□□ 0.21
MARK3-211ENST00000556744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
MARK3-211ENST00000556744 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
MARK3-211ENST00000556744 CEP170Q5SW79 1584 aa16.3■□□□□ 0.2
MARK3-211ENST00000556744 TRIM41Q8WV44 630 aa16.29■□□□□ 0.2
MARK3-211ENST00000556744 SAMD1Q6SPF0 538 aaPredicted RBP16.28■□□□□ 0.2
MARK3-211ENST00000556744 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
MARK3-211ENST00000556744 CUL7Q14999 1698 aa16.25■□□□□ 0.19
MARK3-211ENST00000556744 SHROOM2Q13796 1616 aa16.24■□□□□ 0.19
MARK3-211ENST00000556744 U3KPZ7 1027 aaPredicted RBP16.24■□□□□ 0.19
MARK3-211ENST00000556744 CYB5RLQ6IPT4 315 aa16.23■□□□□ 0.19
MARK3-211ENST00000556744 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
MARK3-211ENST00000556744 RUSC2Q8N2Y8 1516 aa16.17■□□□□ 0.18
MARK3-211ENST00000556744 KIAA0586Q9BVV6 1533 aa16.16■□□□□ 0.18
MARK3-211ENST00000556744 JPH4Q96JJ6 628 aa16.16■□□□□ 0.18
MARK3-211ENST00000556744 ERCC6L2Q5T890 1561 aa16.16■□□□□ 0.18
MARK3-211ENST00000556744 PRG4Q92954 1404 aaPredicted RBP16.11■□□□□ 0.17
MARK3-211ENST00000556744 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
MARK3-211ENST00000556744 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
MARK3-211ENST00000556744 PRXQ9BXM0 1461 aa16.06■□□□□ 0.16
MARK3-211ENST00000556744 APLP2Q06481 763 aa16.06■□□□□ 0.16
MARK3-211ENST00000556744 IQGAP2Q13576 1575 aa16.01■□□□□ 0.15
MARK3-211ENST00000556744 EEA1Q15075 1411 aa16■□□□□ 0.15
MARK3-211ENST00000556744 UGGT2Q9NYU1 1516 aa15.98■□□□□ 0.15
MARK3-211ENST00000556744 DISP1Q96F81 1524 aa15.95■□□□□ 0.14
MARK3-211ENST00000556744 CARMIL2Q6F5E8 1435 aa15.94■□□□□ 0.14
MARK3-211ENST00000556744 TNIKQ9UKE5 1360 aa15.92■□□□□ 0.14
MARK3-211ENST00000556744 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
MARK3-211ENST00000556744 PTPRGP23470 1445 aa15.91■□□□□ 0.14
MARK3-211ENST00000556744 FKBP8Q14318 412 aa15.9■□□□□ 0.14
MARK3-211ENST00000556744 ADCY10Q96PN6 1610 aa15.89■□□□□ 0.13
MARK3-211ENST00000556744 TRHP20396 242 aaPredicted RBP15.87■□□□□ 0.13
MARK3-211ENST00000556744 KIAA0556O60303 1618 aa15.86■□□□□ 0.13
MARK3-211ENST00000556744 UHRF1BP1LA0JNW5 1464 aa15.85■□□□□ 0.13
MARK3-211ENST00000556744 MAPKBP1O60336 1514 aa15.84■□□□□ 0.13
MARK3-211ENST00000556744 ZNF219Q9P2Y4 722 aaPredicted RBP15.84■□□□□ 0.13
MARK3-211ENST00000556744 GOLGA3Q08378 1498 aa15.84■□□□□ 0.13
MARK3-211ENST00000556744 KIF21BO75037 1637 aa15.83■□□□□ 0.12
MARK3-211ENST00000556744 UACAQ9BZF9 1416 aa15.82■□□□□ 0.12
MARK3-211ENST00000556744 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
MARK3-211ENST00000556744 ABCC2Q92887 1545 aa15.8■□□□□ 0.12
MARK3-211ENST00000556744 FAM9AQ8IZU1 332 aaPredicted RBP15.78■□□□□ 0.12
MARK3-211ENST00000556744 ABCC10Q5T3U5 1492 aa15.78■□□□□ 0.12
MARK3-211ENST00000556744 KDM5BQ9UGL1 1544 aa15.77■□□□□ 0.11
MARK3-211ENST00000556744 KIF13AQ9H1H9 1805 aa15.77■□□□□ 0.11
MARK3-211ENST00000556744 SAMD9Q5K651 1589 aa15.76■□□□□ 0.11
MARK3-211ENST00000556744 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
MARK3-211ENST00000556744 ABCA8O94911 1581 aa15.74■□□□□ 0.11
MARK3-211ENST00000556744 POTEDQ86YR6 584 aa15.73■□□□□ 0.11
MARK3-211ENST00000556744 DIP2BQ9P265 1576 aa15.72■□□□□ 0.11
MARK3-211ENST00000556744 PLB1Q6P1J6 1458 aa15.71■□□□□ 0.11
MARK3-211ENST00000556744 TTBK1Q5TCY1 1321 aaPredicted RBP15.71■□□□□ 0.11
MARK3-211ENST00000556744 FAM69CQ0P6D2 419 aa15.69■□□□□ 0.1
MARK3-211ENST00000556744 ASXL2Q76L83 1435 aa15.68■□□□□ 0.1
MARK3-211ENST00000556744 ZCCHC11Q5TAX3 1644 aaKnown RBP15.67■□□□□ 0.1
MARK3-211ENST00000556744 GLI2P10070 1586 aa15.66■□□□□ 0.1
MARK3-211ENST00000556744 EFCAB5A4FU69 1503 aa15.65■□□□□ 0.1
MARK3-211ENST00000556744 C1QBPQ07021 282 aaKnown RBP15.65■□□□□ 0.1
MARK3-211ENST00000556744 P3H3Q8IVL6 736 aa15.64■□□□□ 0.09
MARK3-211ENST00000556744 EPRSP07814 1512 aaKnown RBP15.62■□□□□ 0.09
MARK3-211ENST00000556744 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
MARK3-211ENST00000556744 SPINK5Q9NQ38 1064 aaPredicted RBP15.61■□□□□ 0.09
MARK3-211ENST00000556744 ATP10BO94823 1461 aa15.6■□□□□ 0.09
MARK3-211ENST00000556744 FHOD3Q2V2M9 1422 aa15.6■□□□□ 0.09
MARK3-211ENST00000556744 WDR7Q9Y4E6 1490 aa15.59■□□□□ 0.09
MARK3-211ENST00000556744 RAPGEF6Q8TEU7 1601 aa15.58■□□□□ 0.09
MARK3-211ENST00000556744 CAPN15O75808 1086 aa15.58■□□□□ 0.08
MARK3-211ENST00000556744 NUP153P49790 1475 aaKnown RBP15.56■□□□□ 0.08
MARK3-211ENST00000556744 ARHGAP35Q9NRY4 1499 aa15.56■□□□□ 0.08
MARK3-211ENST00000556744 PPRC1Q5VV67 1664 aaKnown RBP15.55■□□□□ 0.08
MARK3-211ENST00000556744 MAP3K4Q9Y6R4 1608 aa15.55■□□□□ 0.08
MARK3-211ENST00000556744 RANGAP1P46060 587 aaPredicted RBP15.53■□□□□ 0.08
MARK3-211ENST00000556744 TSPOAP1O95153 1857 aa15.52■□□□□ 0.07
MARK3-211ENST00000556744 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
MARK3-211ENST00000556744 CFAP43Q8NDM7 1665 aa15.49■□□□□ 0.07
MARK3-211ENST00000556744 POLA2Q14181 598 aa15.49■□□□□ 0.07
MARK3-211ENST00000556744 AMER1Q5JTC6 1135 aaPredicted RBP15.49■□□□□ 0.07
MARK3-211ENST00000556744 MAGI3Q5TCQ9 1506 aa15.48■□□□□ 0.07
MARK3-211ENST00000556744 TEX14Q8IWB6 1497 aa15.46■□□□□ 0.07
MARK3-211ENST00000556744 CD109Q6YHK3 1445 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms