RNA–Protein interactions for RNA: ENST00000556189.5

NRDE2-205, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 2,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-205ENST00000556189 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
NRDE2-205ENST00000556189 CUX2O14529 1486 aa16.25■□□□□ 0.19
NRDE2-205ENST00000556189 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
NRDE2-205ENST00000556189 KIF21BO75037 1637 aa16.21■□□□□ 0.19
NRDE2-205ENST00000556189 CLSPNQ9HAW4 1339 aa16.21■□□□□ 0.19
NRDE2-205ENST00000556189 DHX57Q6P158 1386 aaKnown RBP16.2■□□□□ 0.18
NRDE2-205ENST00000556189 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
NRDE2-205ENST00000556189 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
NRDE2-205ENST00000556189 TRIM52Q96A61 297 aa16.18■□□□□ 0.18
NRDE2-205ENST00000556189 PRXQ9BXM0 1461 aa16.18■□□□□ 0.18
NRDE2-205ENST00000556189 IGF1RP08069 1367 aa16.16■□□□□ 0.18
NRDE2-205ENST00000556189 DDX10Q13206 875 aaKnown RBP16.16■□□□□ 0.18
NRDE2-205ENST00000556189 VPS8Q8N3P4 1428 aa16.16■□□□□ 0.18
NRDE2-205ENST00000556189 ABCA10Q8WWZ4 1543 aa16.15■□□□□ 0.18
NRDE2-205ENST00000556189 RBM19Q9Y4C8 960 aaKnown RBP16.15■□□□□ 0.18
NRDE2-205ENST00000556189 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
NRDE2-205ENST00000556189 NEFLP07196 543 aa16.11■□□□□ 0.17
NRDE2-205ENST00000556189 TDRD9Q8NDG6 1382 aaKnown RBP16.11■□□□□ 0.17
NRDE2-205ENST00000556189 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
NRDE2-205ENST00000556189 WDR97A6NE52 1622 aa16.09■□□□□ 0.17
NRDE2-205ENST00000556189 FAM50AQ14320 339 aaKnown RBP16.08■□□□□ 0.17
NRDE2-205ENST00000556189 ERICH3Q5RHP9 1530 aa16.08■□□□□ 0.17
NRDE2-205ENST00000556189 TARBP1Q13395 1621 aaKnown RBP16.06■□□□□ 0.16
NRDE2-205ENST00000556189 CARMIL1Q5VZK9 1371 aa16.06■□□□□ 0.16
NRDE2-205ENST00000556189 IRX6P78412 446 aaPredicted RBP16.06■□□□□ 0.16
NRDE2-205ENST00000556189 WDR62O43379 1518 aa16.05■□□□□ 0.16
NRDE2-205ENST00000556189 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
NRDE2-205ENST00000556189 ARID3CA6NKF2 412 aa16.04■□□□□ 0.16
NRDE2-205ENST00000556189 THOC2Q8NI27 1593 aaKnown RBP16.02■□□□□ 0.16
NRDE2-205ENST00000556189 ABCA5Q8WWZ7 1642 aa16.02■□□□□ 0.16
NRDE2-205ENST00000556189 MSH5O43196 834 aa16.01■□□□□ 0.15
NRDE2-205ENST00000556189 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
NRDE2-205ENST00000556189 GAPVD1Q14C86 1478 aa16■□□□□ 0.15
NRDE2-205ENST00000556189 AQRO60306 1485 aaKnown RBP eCLIP15.99■□□□□ 0.155e-6■■■□□ 16.9
NRDE2-205ENST00000556189 ZNF608Q9ULD9 1512 aaPredicted RBP15.98■□□□□ 0.15
NRDE2-205ENST00000556189 ERICH6Q7L0X2 663 aa15.98■□□□□ 0.15
NRDE2-205ENST00000556189 IFT140Q96RY7 1462 aa15.93■□□□□ 0.14
NRDE2-205ENST00000556189 CUL7Q14999 1698 aa15.91■□□□□ 0.14
NRDE2-205ENST00000556189 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
NRDE2-205ENST00000556189 RAB3GAP2Q9H2M9 1393 aa15.88■□□□□ 0.13
NRDE2-205ENST00000556189 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
NRDE2-205ENST00000556189 ANP32CO43423 234 aa15.88■□□□□ 0.13
NRDE2-205ENST00000556189 CCNB3Q8WWL7 1395 aa15.86■□□□□ 0.13
NRDE2-205ENST00000556189 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
NRDE2-205ENST00000556189 EIF4G3O43432 1585 aaKnown RBP15.84■□□□□ 0.13
NRDE2-205ENST00000556189 HNRNPUQ00839 825 aaKnown RBP eCLIP15.83■□□□□ 0.12
NRDE2-205ENST00000556189 FHOD3Q2V2M9 1422 aa15.82■□□□□ 0.12
NRDE2-205ENST00000556189 CDK11AQ9UQ88 783 aaPredicted RBP15.81■□□□□ 0.12
NRDE2-205ENST00000556189 ADAMTS12P58397 1594 aa15.81■□□□□ 0.12
NRDE2-205ENST00000556189 PPP1R15AO75807 674 aaPredicted RBP15.81■□□□□ 0.12
NRDE2-205ENST00000556189 PHLDB1Q86UU1 1377 aa15.8■□□□□ 0.12
NRDE2-205ENST00000556189 FHAD1B1AJZ9 1412 aa15.8■□□□□ 0.12
NRDE2-205ENST00000556189 CHIC2Q9UKJ5 165 aa15.8■□□□□ 0.12
NRDE2-205ENST00000556189 SNAPC4Q5SXM2 1469 aa15.8■□□□□ 0.12
NRDE2-205ENST00000556189 RRBP1Q9P2E9 1410 aaKnown RBP15.77■□□□□ 0.12
NRDE2-205ENST00000556189 NBR1Q14596 966 aa15.77■□□□□ 0.12
NRDE2-205ENST00000556189 CTTNBP2Q8WZ74 1663 aa15.77■□□□□ 0.12
NRDE2-205ENST00000556189 MAPKBP1O60336 1514 aa15.77■□□□□ 0.11
NRDE2-205ENST00000556189 CNGB1Q14028 1251 aaPredicted RBP15.76■□□□□ 0.11
NRDE2-205ENST00000556189 DEKP35659 375 aaKnown RBP15.71■□□□□ 0.11
NRDE2-205ENST00000556189 B4GALNT3Q6L9W6 998 aa15.71■□□□□ 0.1
NRDE2-205ENST00000556189 CCER2I3L3R5 266 aa15.69■□□□□ 0.1
NRDE2-205ENST00000556189 RRP7BPQ9NSQ0 103 aa15.69■□□□□ 0.1
NRDE2-205ENST00000556189 SENP3-EIF4A1A0A087X0R7 540 aa15.69■□□□□ 0.1
NRDE2-205ENST00000556189 SETD5Q9C0A6 1442 aa15.68■□□□□ 0.1
NRDE2-205ENST00000556189 FBLN2P98095 1184 aa15.68■□□□□ 0.1
NRDE2-205ENST00000556189 GRIN2AQ12879 1464 aa15.68■□□□□ 0.1
NRDE2-205ENST00000556189 MAGI1Q96QZ7 1491 aaPredicted RBP15.67■□□□□ 0.1
NRDE2-205ENST00000556189 FANCIQ9NVI1 1328 aa15.67■□□□□ 0.1
NRDE2-205ENST00000556189 FOXD1Q16676 465 aa15.67■□□□□ 0.1
NRDE2-205ENST00000556189 CHMP7Q8WUX9 453 aaPredicted RBP15.66■□□□□ 0.1
NRDE2-205ENST00000556189 EFCAB5A4FU69 1503 aa15.65■□□□□ 0.1
NRDE2-205ENST00000556189 SYNJ2O15056 1496 aa15.64■□□□□ 0.09
NRDE2-205ENST00000556189 SAMD9Q5K651 1589 aa15.64■□□□□ 0.09
NRDE2-205ENST00000556189 IQGAP2Q13576 1575 aa15.64■□□□□ 0.09
NRDE2-205ENST00000556189 FAM9BQ8IZU0 186 aa15.63■□□□□ 0.09
NRDE2-205ENST00000556189 PCF11O94913 1555 aaKnown RBP15.62■□□□□ 0.09
NRDE2-205ENST00000556189 TONSLQ96HA7 1378 aa15.62■□□□□ 0.09
NRDE2-205ENST00000556189 CEP170Q5SW79 1584 aa15.61■□□□□ 0.09
NRDE2-205ENST00000556189 LRRC9Q6ZRR7 1453 aa15.61■□□□□ 0.09
NRDE2-205ENST00000556189 CCDC184Q52MB2 194 aa15.61■□□□□ 0.09
NRDE2-205ENST00000556189 PAK3O75914 559 aaPredicted RBP15.59■□□□□ 0.09
NRDE2-205ENST00000556189 MTUS2Q5JR59 1369 aa15.59■□□□□ 0.09
NRDE2-205ENST00000556189 KIAA0586Q9BVV6 1533 aa15.59■□□□□ 0.09
NRDE2-205ENST00000556189 ANO8Q9HCE9 1232 aaPredicted RBP15.55■□□□□ 0.08
NRDE2-205ENST00000556189 TIAM1Q13009 1591 aa15.55■□□□□ 0.08
NRDE2-205ENST00000556189 UGGT2Q9NYU1 1516 aa15.55■□□□□ 0.08
NRDE2-205ENST00000556189 NUP160Q12769 1436 aa15.55■□□□□ 0.08
NRDE2-205ENST00000556189 RTN4Q9NQC3 1192 aaKnown RBP15.54■□□□□ 0.08
NRDE2-205ENST00000556189 PPP4R2Q9NY27 417 aa15.54■□□□□ 0.08
NRDE2-205ENST00000556189 CASKIN1Q8WXD9 1431 aa15.54■□□□□ 0.08
NRDE2-205ENST00000556189 DISP1Q96F81 1524 aa15.54■□□□□ 0.08
NRDE2-205ENST00000556189 FMN1Q68DA7 1419 aa15.53■□□□□ 0.08
NRDE2-205ENST00000556189 FYCO1Q9BQS8 1478 aa15.52■□□□□ 0.08
NRDE2-205ENST00000556189 NOP58Q9Y2X3 529 aaKnown RBP15.52■□□□□ 0.08
NRDE2-205ENST00000556189 PTPRKQ15262 1439 aa15.51■□□□□ 0.07
NRDE2-205ENST00000556189 POLR3GLQ9BT43 218 aa15.5■□□□□ 0.07
NRDE2-205ENST00000556189 KIAA0556O60303 1618 aa15.49■□□□□ 0.07
NRDE2-205ENST00000556189 CHD1O14646 1710 aa15.49■□□□□ 0.07
NRDE2-205ENST00000556189 LRRIQ1Q96JM4 1722 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 283.5 ms