RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 CUL7Q14999 1698 aa29.8■■■□□ 2.36
XRCC3-215ENST00000555964 KIF13AQ9H1H9 1805 aa29.79■■■□□ 2.36
XRCC3-215ENST00000555964 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
XRCC3-215ENST00000555964 KIAA0586Q9BVV6 1533 aa29.72■■■□□ 2.35
XRCC3-215ENST00000555964 NPM1P06748 294 aaKnown RBP eCLIP29.71■■■□□ 2.35
XRCC3-215ENST00000555964 IGF1RP08069 1367 aa29.68■■■□□ 2.34
XRCC3-215ENST00000555964 MAPKBP1O60336 1514 aa29.66■■■□□ 2.34
XRCC3-215ENST00000555964 ABCC10Q5T3U5 1492 aa29.62■■■□□ 2.33
XRCC3-215ENST00000555964 ADCY10Q96PN6 1610 aa29.62■■■□□ 2.33
XRCC3-215ENST00000555964 FAM69CQ0P6D2 419 aa29.56■■■□□ 2.32
XRCC3-215ENST00000555964 DIP2BQ9P265 1576 aa29.56■■■□□ 2.32
XRCC3-215ENST00000555964 CARMIL1Q5VZK9 1371 aa29.54■■■□□ 2.32
XRCC3-215ENST00000555964 CARMIL2Q6F5E8 1435 aa29.48■■■□□ 2.31
XRCC3-215ENST00000555964 PTPRGP23470 1445 aa29.45■■■□□ 2.31
XRCC3-215ENST00000555964 IQGAP2Q13576 1575 aa29.45■■■□□ 2.31
XRCC3-215ENST00000555964 TNIKQ9UKE5 1360 aa29.41■■■□□ 2.3
XRCC3-215ENST00000555964 TSPOAP1O95153 1857 aa29.38■■■□□ 2.29
XRCC3-215ENST00000555964 KDM6BO15054 1643 aa29.37■■■□□ 2.29
XRCC3-215ENST00000555964 ABCC2Q92887 1545 aa29.35■■■□□ 2.29
XRCC3-215ENST00000555964 UHRF1BP1LA0JNW5 1464 aa29.29■■■□□ 2.28
XRCC3-215ENST00000555964 RAPGEF2Q9Y4G8 1499 aa29.29■■■□□ 2.28
XRCC3-215ENST00000555964 TTBK1Q5TCY1 1321 aaPredicted RBP29.28■■■□□ 2.28
XRCC3-215ENST00000555964 PLB1Q6P1J6 1458 aa29.28■■■□□ 2.28
XRCC3-215ENST00000555964 UACAQ9BZF9 1416 aa29.24■■■□□ 2.27
XRCC3-215ENST00000555964 DISP1Q96F81 1524 aa29.24■■■□□ 2.27
XRCC3-215ENST00000555964 UGGT2Q9NYU1 1516 aa29.24■■■□□ 2.27
XRCC3-215ENST00000555964 ASXL2Q76L83 1435 aa29.23■■■□□ 2.27
XRCC3-215ENST00000555964 GLI2P10070 1586 aa29.22■■■□□ 2.27
XRCC3-215ENST00000555964 KIAA0556O60303 1618 aa29.16■■■□□ 2.26
XRCC3-215ENST00000555964 KDM5BQ9UGL1 1544 aa29.14■■■□□ 2.25
XRCC3-215ENST00000555964 CTTNBP2Q8WZ74 1663 aa29.13■■■□□ 2.25
XRCC3-215ENST00000555964 PPRC1Q5VV67 1664 aaKnown RBP29.11■■■□□ 2.25
XRCC3-215ENST00000555964 ZCCHC11Q5TAX3 1644 aaKnown RBP29.09■■■□□ 2.25
XRCC3-215ENST00000555964 EPRSP07814 1512 aaKnown RBP29.05■■■□□ 2.24
XRCC3-215ENST00000555964 MAP3K4Q9Y6R4 1608 aa29.05■■■□□ 2.24
XRCC3-215ENST00000555964 GOLGA3Q08378 1498 aa29.04■■■□□ 2.24
XRCC3-215ENST00000555964 TEX14Q8IWB6 1497 aa29.04■■■□□ 2.24
XRCC3-215ENST00000555964 KDM4FA0A1W2PPD8 638 aa28.98■■■□□ 2.23
XRCC3-215ENST00000555964 WDR7Q9Y4E6 1490 aa28.96■■■□□ 2.23
XRCC3-215ENST00000555964 PRXQ9BXM0 1461 aa28.91■■■□□ 2.22
XRCC3-215ENST00000555964 ABCA8O94911 1581 aa28.88■■■□□ 2.21
XRCC3-215ENST00000555964 FAM9AQ8IZU1 332 aaPredicted RBP28.87■■■□□ 2.21
XRCC3-215ENST00000555964 CFAP43Q8NDM7 1665 aa28.86■■■□□ 2.21
XRCC3-215ENST00000555964 COL17A1Q9UMD9 1497 aaPredicted RBP28.84■■■□□ 2.21
XRCC3-215ENST00000555964 ADGRL1O94910 1474 aa28.83■■■□□ 2.21
XRCC3-215ENST00000555964 MAGI3Q5TCQ9 1506 aa28.79■■■□□ 2.2
XRCC3-215ENST00000555964 CD109Q6YHK3 1445 aa28.77■■■□□ 2.2
XRCC3-215ENST00000555964 KCNH8Q96L42 1107 aa28.71■■■□□ 2.19
XRCC3-215ENST00000555964 SAMD9Q5K651 1589 aa28.64■■■□□ 2.18
XRCC3-215ENST00000555964 CSRNP3Q8WYN3 585 aa28.62■■■□□ 2.17
XRCC3-215ENST00000555964 EEA1Q15075 1411 aa28.6■■■□□ 2.17
XRCC3-215ENST00000555964 ATP10BO94823 1461 aa28.59■■■□□ 2.17
XRCC3-215ENST00000555964 RAPGEF6Q8TEU7 1601 aa28.58■■■□□ 2.17
XRCC3-215ENST00000555964 P3H3Q8IVL6 736 aa28.57■■■□□ 2.16
XRCC3-215ENST00000555964 ARAP3Q8WWN8 1544 aa28.57■■■□□ 2.16
XRCC3-215ENST00000555964 ABCA9Q8IUA7 1624 aa28.57■■■□□ 2.16
XRCC3-215ENST00000555964 PHLDB1Q86UU1 1377 aa28.56■■■□□ 2.16
XRCC3-215ENST00000555964 ARID3CA6NKF2 412 aa28.52■■■□□ 2.16
XRCC3-215ENST00000555964 KIF21BO75037 1637 aa28.49■■■□□ 2.15
XRCC3-215ENST00000555964 HECW2Q9P2P5 1572 aa28.49■■■□□ 2.15
XRCC3-215ENST00000555964 NEO1Q92859 1461 aa28.46■■■□□ 2.15
XRCC3-215ENST00000555964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.45■■■□□ 2.14
XRCC3-215ENST00000555964 HNRNPUL2Q1KMD3 747 aaKnown RBP28.45■■■□□ 2.14
XRCC3-215ENST00000555964 NUP153P49790 1475 aaKnown RBP28.41■■■□□ 2.14
XRCC3-215ENST00000555964 EFCAB5A4FU69 1503 aa28.39■■■□□ 2.14
XRCC3-215ENST00000555964 FHOD3Q2V2M9 1422 aa28.38■■■□□ 2.13
XRCC3-215ENST00000555964 RANGAP1P46060 587 aaPredicted RBP28.33■■■□□ 2.13
XRCC3-215ENST00000555964 CFAP74Q9C0B2 1584 aa28.33■■■□□ 2.12
XRCC3-215ENST00000555964 PLEKHD1A6NEE1 506 aa28.31■■■□□ 2.12
XRCC3-215ENST00000555964 RAPGEF3O95398 923 aa28.29■■■□□ 2.12
XRCC3-215ENST00000555964 ADAMTSL3P82987 1691 aa28.28■■■□□ 2.12
XRCC3-215ENST00000555964 FRMPD1Q5SYB0 1578 aa28.28■■■□□ 2.12
XRCC3-215ENST00000555964 ILDR1Q86SU0 546 aaPredicted RBP28.27■■■□□ 2.12
XRCC3-215ENST00000555964 BCORL1Q5H9F3 1711 aa28.23■■■□□ 2.11
XRCC3-215ENST00000555964 ARHGEF40Q8TER5 1519 aa28.23■■■□□ 2.11
XRCC3-215ENST00000555964 DENND4BO75064 1496 aaPredicted RBP28.22■■■□□ 2.11
XRCC3-215ENST00000555964 PTPRMP28827 1452 aa28.21■■■□□ 2.11
XRCC3-215ENST00000555964 RICTORQ6R327 1708 aa28.21■■■□□ 2.11
XRCC3-215ENST00000555964 FANCAO15360 1455 aa28.21■■■□□ 2.11
XRCC3-215ENST00000555964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.2■■■□□ 2.12e-6■■■■■ 51.7
XRCC3-215ENST00000555964 AKNAQ7Z591 1439 aa28.18■■■□□ 2.1
XRCC3-215ENST00000555964 ARID4BQ4LE39 1312 aaPredicted RBP28.18■■■□□ 2.1
XRCC3-215ENST00000555964 TTC37Q6PGP7 1564 aa28.16■■■□□ 2.1
XRCC3-215ENST00000555964 MADDQ8WXG6 1647 aa28.14■■■□□ 2.09
XRCC3-215ENST00000555964 ZMYM4Q5VZL5 1548 aa28.13■■■□□ 2.09
XRCC3-215ENST00000555964 FMN1Q68DA7 1419 aa28.12■■■□□ 2.09
XRCC3-215ENST00000555964 HECW1Q76N89 1606 aa28.11■■■□□ 2.09
XRCC3-215ENST00000555964 CDK13Q14004 1512 aaKnown RBP28.11■■■□□ 2.09
XRCC3-215ENST00000555964 POGZQ7Z3K3 1410 aa28.09■■■□□ 2.09
XRCC3-215ENST00000555964 MAGI2Q86UL8 1455 aa28.08■■■□□ 2.09
XRCC3-215ENST00000555964 UBTFP17480 764 aaKnown RBP28.08■■■□□ 2.09
XRCC3-215ENST00000555964 ZFYVE16Q7Z3T8 1539 aa28.07■■■□□ 2.08
XRCC3-215ENST00000555964 RIMS1Q86UR5 1692 aaKnown RBP28.06■■■□□ 2.08
XRCC3-215ENST00000555964 CDK11AQ9UQ88 783 aaPredicted RBP28.04■■■□□ 2.08
XRCC3-215ENST00000555964 MYO5CQ9NQX4 1742 aa28.04■■■□□ 2.08
XRCC3-215ENST00000555964 PCF11O94913 1555 aaKnown RBP28.03■■■□□ 2.08
XRCC3-215ENST00000555964 PLCH2O75038 1416 aa28.02■■■□□ 2.08
XRCC3-215ENST00000555964 ARHGAP35Q9NRY4 1499 aa27.99■■■□□ 2.07
XRCC3-215ENST00000555964 ATP1B4Q9UN42 357 aaPredicted RBP27.98■■■□□ 2.07
XRCC3-215ENST00000555964 KIF14Q15058 1648 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms