RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 PRG4Q92954 1404 aaPredicted RBP17.11■□□□□ 0.33
HNRNPC-219ENST00000555309 CUL7Q14999 1698 aa17.09■□□□□ 0.33
HNRNPC-219ENST00000555309 TRHP20396 242 aaPredicted RBP17.08■□□□□ 0.32
HNRNPC-219ENST00000555309 KIAA0586Q9BVV6 1533 aa17.04■□□□□ 0.32
HNRNPC-219ENST00000555309 TTBK1Q5TCY1 1321 aaPredicted RBP16.98■□□□□ 0.31
HNRNPC-219ENST00000555309 RAPGEF2Q9Y4G8 1499 aa16.97■□□□□ 0.31
HNRNPC-219ENST00000555309 IQGAP2Q13576 1575 aa16.9■□□□□ 0.3
HNRNPC-219ENST00000555309 FAM9AQ8IZU1 332 aaPredicted RBP16.89■□□□□ 0.29
HNRNPC-219ENST00000555309 PRXQ9BXM0 1461 aa16.89■□□□□ 0.29
HNRNPC-219ENST00000555309 DISP1Q96F81 1524 aa16.87■□□□□ 0.29
HNRNPC-219ENST00000555309 PTPRGP23470 1445 aa16.86■□□□□ 0.29
HNRNPC-219ENST00000555309 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
HNRNPC-219ENST00000555309 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
HNRNPC-219ENST00000555309 ADCY10Q96PN6 1610 aa16.86■□□□□ 0.29
HNRNPC-219ENST00000555309 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.29
HNRNPC-219ENST00000555309 CARMIL2Q6F5E8 1435 aa16.83■□□□□ 0.28
HNRNPC-219ENST00000555309 UGGT2Q9NYU1 1516 aa16.81■□□□□ 0.28
HNRNPC-219ENST00000555309 NPM1P06748 294 aaKnown RBP eCLIP16.8■□□□□ 0.28
HNRNPC-219ENST00000555309 CTTNBP2Q8WZ74 1663 aa16.78■□□□□ 0.28
HNRNPC-219ENST00000555309 KIAA0556O60303 1618 aa16.77■□□□□ 0.27
HNRNPC-219ENST00000555309 FAM69CQ0P6D2 419 aa16.76■□□□□ 0.27
HNRNPC-219ENST00000555309 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
HNRNPC-219ENST00000555309 KIF13AQ9H1H9 1805 aa16.75■□□□□ 0.27
HNRNPC-219ENST00000555309 P3H3Q8IVL6 736 aa16.75■□□□□ 0.27
HNRNPC-219ENST00000555309 UACAQ9BZF9 1416 aa16.73■□□□□ 0.27
HNRNPC-219ENST00000555309 RANGAP1P46060 587 aaPredicted RBP16.73■□□□□ 0.27
HNRNPC-219ENST00000555309 MAPKBP1O60336 1514 aa16.72■□□□□ 0.27
HNRNPC-219ENST00000555309 ABCC10Q5T3U5 1492 aa16.71■□□□□ 0.27
HNRNPC-219ENST00000555309 ABCC2Q92887 1545 aa16.71■□□□□ 0.27
HNRNPC-219ENST00000555309 EEA1Q15075 1411 aa16.71■□□□□ 0.26
HNRNPC-219ENST00000555309 PLB1Q6P1J6 1458 aa16.69■□□□□ 0.26
HNRNPC-219ENST00000555309 UHRF1BP1LA0JNW5 1464 aa16.68■□□□□ 0.26
HNRNPC-219ENST00000555309 DIP2BQ9P265 1576 aa16.68■□□□□ 0.26
HNRNPC-219ENST00000555309 ASXL2Q76L83 1435 aa16.66■□□□□ 0.26
HNRNPC-219ENST00000555309 GOLGA3Q08378 1498 aa16.66■□□□□ 0.26
HNRNPC-219ENST00000555309 ARID3CA6NKF2 412 aa16.65■□□□□ 0.26
HNRNPC-219ENST00000555309 KDM5BQ9UGL1 1544 aa16.64■□□□□ 0.25
HNRNPC-219ENST00000555309 ZCCHC11Q5TAX3 1644 aaKnown RBP16.61■□□□□ 0.25
HNRNPC-219ENST00000555309 ABCA8O94911 1581 aa16.6■□□□□ 0.25
HNRNPC-219ENST00000555309 TSPOAP1O95153 1857 aa16.6■□□□□ 0.25
HNRNPC-219ENST00000555309 KIF21BO75037 1637 aa16.59■□□□□ 0.25
HNRNPC-219ENST00000555309 SAMD9Q5K651 1589 aa16.59■□□□□ 0.25
HNRNPC-219ENST00000555309 FHOD3Q2V2M9 1422 aa16.57■□□□□ 0.24
HNRNPC-219ENST00000555309 UBTFP17480 764 aaKnown RBP16.56■□□□□ 0.24
HNRNPC-219ENST00000555309 EPRSP07814 1512 aaKnown RBP16.54■□□□□ 0.24
HNRNPC-219ENST00000555309 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
HNRNPC-219ENST00000555309 GLI2P10070 1586 aa16.51■□□□□ 0.23
HNRNPC-219ENST00000555309 ATP10BO94823 1461 aa16.51■□□□□ 0.23
HNRNPC-219ENST00000555309 PPRC1Q5VV67 1664 aaKnown RBP16.51■□□□□ 0.23
HNRNPC-219ENST00000555309 WDR7Q9Y4E6 1490 aa16.5■□□□□ 0.23
HNRNPC-219ENST00000555309 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
HNRNPC-219ENST00000555309 RAPGEF6Q8TEU7 1601 aa16.46■□□□□ 0.23
HNRNPC-219ENST00000555309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
HNRNPC-219ENST00000555309 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
HNRNPC-219ENST00000555309 KDM6BO15054 1643 aa16.45■□□□□ 0.22
HNRNPC-219ENST00000555309 MAP3K4Q9Y6R4 1608 aa16.45■□□□□ 0.22
HNRNPC-219ENST00000555309 NUP153P49790 1475 aaKnown RBP16.45■□□□□ 0.22
HNRNPC-219ENST00000555309 COL17A1Q9UMD9 1497 aaPredicted RBP16.45■□□□□ 0.22
HNRNPC-219ENST00000555309 ARHGAP35Q9NRY4 1499 aa16.43■□□□□ 0.22
HNRNPC-219ENST00000555309 EFCAB5A4FU69 1503 aa16.42■□□□□ 0.22
HNRNPC-219ENST00000555309 CD109Q6YHK3 1445 aa16.4■□□□□ 0.22
HNRNPC-219ENST00000555309 ATP1B4Q9UN42 357 aaPredicted RBP16.38■□□□□ 0.21
HNRNPC-219ENST00000555309 CDK13Q14004 1512 aaKnown RBP16.35■□□□□ 0.21
HNRNPC-219ENST00000555309 CFAP43Q8NDM7 1665 aa16.34■□□□□ 0.21
HNRNPC-219ENST00000555309 TEX14Q8IWB6 1497 aa16.34■□□□□ 0.21
HNRNPC-219ENST00000555309 MAGI3Q5TCQ9 1506 aa16.33■□□□□ 0.21
HNRNPC-219ENST00000555309 PLEKHD1A6NEE1 506 aa16.32■□□□□ 0.2
HNRNPC-219ENST00000555309 ABCA9Q8IUA7 1624 aa16.3■□□□□ 0.2
HNRNPC-219ENST00000555309 FMN1Q68DA7 1419 aa16.3■□□□□ 0.2
HNRNPC-219ENST00000555309 KDM4FA0A1W2PPD8 638 aa16.28■□□□□ 0.2
HNRNPC-219ENST00000555309 LOC105371045A0A1W2PR82 267 aa16.25■□□□□ 0.19
HNRNPC-219ENST00000555309 LRRIQ1Q96JM4 1722 aa16.25■□□□□ 0.19
HNRNPC-219ENST00000555309 CLIP1P30622 1438 aa16.24■□□□□ 0.19
HNRNPC-219ENST00000555309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.191e-13■■■□□ 15.2
HNRNPC-219ENST00000555309 RAPGEF3O95398 923 aa16.24■□□□□ 0.19
HNRNPC-219ENST00000555309 HECW1Q76N89 1606 aa16.23■□□□□ 0.19
HNRNPC-219ENST00000555309 TTC37Q6PGP7 1564 aa16.23■□□□□ 0.19
HNRNPC-219ENST00000555309 PCF11O94913 1555 aaKnown RBP16.21■□□□□ 0.19
HNRNPC-219ENST00000555309 ARAP3Q8WWN8 1544 aa16.2■□□□□ 0.18
HNRNPC-219ENST00000555309 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
HNRNPC-219ENST00000555309 KIF14Q15058 1648 aa16.17■□□□□ 0.18
HNRNPC-219ENST00000555309 NEO1Q92859 1461 aa16.16■□□□□ 0.18
HNRNPC-219ENST00000555309 FANCAO15360 1455 aa16.15■□□□□ 0.18
HNRNPC-219ENST00000555309 CDK11AQ9UQ88 783 aaPredicted RBP16.15■□□□□ 0.18
HNRNPC-219ENST00000555309 AKNAQ7Z591 1439 aa16.15■□□□□ 0.18
HNRNPC-219ENST00000555309 ADGRL1O94910 1474 aa16.15■□□□□ 0.18
HNRNPC-219ENST00000555309 TROQ12816 1431 aaPredicted RBP16.14■□□□□ 0.17
HNRNPC-219ENST00000555309 FRMPD1Q5SYB0 1578 aa16.14■□□□□ 0.17
HNRNPC-219ENST00000555309 CEP162Q5TB80 1403 aa16.14■□□□□ 0.17
HNRNPC-219ENST00000555309 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
HNRNPC-219ENST00000555309 PLCH2O75038 1416 aa16.12■□□□□ 0.17
HNRNPC-219ENST00000555309 FYCO1Q9BQS8 1478 aa16.1■□□□□ 0.17
HNRNPC-219ENST00000555309 DENND4BO75064 1496 aaPredicted RBP16.09■□□□□ 0.17
HNRNPC-219ENST00000555309 CCDC18Q5T9S5 1454 aa16.08■□□□□ 0.16
HNRNPC-219ENST00000555309 SCAPERQ9BY12 1400 aa16.07■□□□□ 0.16
HNRNPC-219ENST00000555309 RICTORQ6R327 1708 aa16.06■□□□□ 0.16
HNRNPC-219ENST00000555309 EFCAB2Q5VUJ9 269 aa16.06■□□□□ 0.16
HNRNPC-219ENST00000555309 MYO5CQ9NQX4 1742 aa16.05■□□□□ 0.16
HNRNPC-219ENST00000555309 YEATS2Q9ULM3 1422 aa16.04■□□□□ 0.16
HNRNPC-219ENST00000555309 AFAP1Q8N556 730 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms