RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 KIF27Q86VH2 1401 aa17.72■□□□□ 0.43
HNRNPC-218ENST00000555215 KIAA0586Q9BVV6 1533 aa17.69■□□□□ 0.42
HNRNPC-218ENST00000555215 KIF13AQ9H1H9 1805 aa17.68■□□□□ 0.42
HNRNPC-218ENST00000555215 CARMIL1Q5VZK9 1371 aa17.66■□□□□ 0.42
HNRNPC-218ENST00000555215 FAM69CQ0P6D2 419 aa17.64■□□□□ 0.41
HNRNPC-218ENST00000555215 ADCY10Q96PN6 1610 aa17.64■□□□□ 0.41
HNRNPC-218ENST00000555215 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
HNRNPC-218ENST00000555215 ABCC10Q5T3U5 1492 aa17.62■□□□□ 0.41
HNRNPC-218ENST00000555215 CUL7Q14999 1698 aa17.61■□□□□ 0.41
HNRNPC-218ENST00000555215 TTBK1Q5TCY1 1321 aaPredicted RBP17.61■□□□□ 0.41
HNRNPC-218ENST00000555215 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
HNRNPC-218ENST00000555215 MAPKBP1O60336 1514 aa17.57■□□□□ 0.4
HNRNPC-218ENST00000555215 PTPRGP23470 1445 aa17.56■□□□□ 0.4
HNRNPC-218ENST00000555215 DIP2BQ9P265 1576 aa17.55■□□□□ 0.4
HNRNPC-218ENST00000555215 TNIKQ9UKE5 1360 aa17.51■□□□□ 0.39
HNRNPC-218ENST00000555215 DISP1Q96F81 1524 aa17.48■□□□□ 0.39
HNRNPC-218ENST00000555215 IQGAP2Q13576 1575 aa17.48■□□□□ 0.39
HNRNPC-218ENST00000555215 CARMIL2Q6F5E8 1435 aa17.47■□□□□ 0.39
HNRNPC-218ENST00000555215 ABCC2Q92887 1545 aa17.45■□□□□ 0.38
HNRNPC-218ENST00000555215 RAPGEF2Q9Y4G8 1499 aa17.44■□□□□ 0.38
HNRNPC-218ENST00000555215 TSPOAP1O95153 1857 aa17.44■□□□□ 0.38
HNRNPC-218ENST00000555215 ASXL2Q76L83 1435 aa17.42■□□□□ 0.38
HNRNPC-218ENST00000555215 UACAQ9BZF9 1416 aa17.41■□□□□ 0.38
HNRNPC-218ENST00000555215 UHRF1BP1LA0JNW5 1464 aa17.4■□□□□ 0.38
HNRNPC-218ENST00000555215 UGGT2Q9NYU1 1516 aa17.4■□□□□ 0.38
HNRNPC-218ENST00000555215 KDM4FA0A1W2PPD8 638 aa17.38■□□□□ 0.37
HNRNPC-218ENST00000555215 KDM6BO15054 1643 aa17.37■□□□□ 0.37
HNRNPC-218ENST00000555215 PLB1Q6P1J6 1458 aa17.36■□□□□ 0.37
HNRNPC-218ENST00000555215 KDM5BQ9UGL1 1544 aa17.35■□□□□ 0.37
HNRNPC-218ENST00000555215 KIAA0556O60303 1618 aa17.34■□□□□ 0.37
HNRNPC-218ENST00000555215 PPRC1Q5VV67 1664 aaKnown RBP17.34■□□□□ 0.37
HNRNPC-218ENST00000555215 COL17A1Q9UMD9 1497 aaPredicted RBP17.33■□□□□ 0.37
HNRNPC-218ENST00000555215 GLI2P10070 1586 aa17.32■□□□□ 0.36
HNRNPC-218ENST00000555215 EPRSP07814 1512 aaKnown RBP17.31■□□□□ 0.36
HNRNPC-218ENST00000555215 PRXQ9BXM0 1461 aa17.3■□□□□ 0.36
HNRNPC-218ENST00000555215 ZCCHC11Q5TAX3 1644 aaKnown RBP17.28■□□□□ 0.36
HNRNPC-218ENST00000555215 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
HNRNPC-218ENST00000555215 MAP3K4Q9Y6R4 1608 aa17.23■□□□□ 0.35
HNRNPC-218ENST00000555215 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
HNRNPC-218ENST00000555215 ABCA8O94911 1581 aa17.21■□□□□ 0.35
HNRNPC-218ENST00000555215 WDR7Q9Y4E6 1490 aa17.21■□□□□ 0.35
HNRNPC-218ENST00000555215 KCNH8Q96L42 1107 aa17.21■□□□□ 0.35
HNRNPC-218ENST00000555215 ARID3CA6NKF2 412 aa17.2■□□□□ 0.34
HNRNPC-218ENST00000555215 GOLGA3Q08378 1498 aa17.18■□□□□ 0.34
HNRNPC-218ENST00000555215 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
HNRNPC-218ENST00000555215 TEX14Q8IWB6 1497 aa17.14■□□□□ 0.33
HNRNPC-218ENST00000555215 CD109Q6YHK3 1445 aa17.13■□□□□ 0.33
HNRNPC-218ENST00000555215 ADGRL1O94910 1474 aa17.13■□□□□ 0.33
HNRNPC-218ENST00000555215 ATP10BO94823 1461 aa17.12■□□□□ 0.33
HNRNPC-218ENST00000555215 MAGI3Q5TCQ9 1506 aa17.1■□□□□ 0.33
HNRNPC-218ENST00000555215 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.32
HNRNPC-218ENST00000555215 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
HNRNPC-218ENST00000555215 CFAP43Q8NDM7 1665 aa17.05■□□□□ 0.32
HNRNPC-218ENST00000555215 SAMD9Q5K651 1589 aa17.05■□□□□ 0.32
HNRNPC-218ENST00000555215 FHOD3Q2V2M9 1422 aa17.01■□□□□ 0.31
HNRNPC-218ENST00000555215 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
HNRNPC-218ENST00000555215 RAPGEF6Q8TEU7 1601 aa16.97■□□□□ 0.31
HNRNPC-218ENST00000555215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
HNRNPC-218ENST00000555215 RAPGEF3O95398 923 aa16.97■□□□□ 0.31
HNRNPC-218ENST00000555215 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
HNRNPC-218ENST00000555215 ARAP3Q8WWN8 1544 aa16.96■□□□□ 0.31
HNRNPC-218ENST00000555215 ABCA9Q8IUA7 1624 aa16.96■□□□□ 0.3
HNRNPC-218ENST00000555215 EEA1Q15075 1411 aa16.96■□□□□ 0.3
HNRNPC-218ENST00000555215 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
HNRNPC-218ENST00000555215 KIF21BO75037 1637 aa16.92■□□□□ 0.3
HNRNPC-218ENST00000555215 HECW2Q9P2P5 1572 aa16.9■□□□□ 0.3
HNRNPC-218ENST00000555215 ILDR1Q86SU0 546 aaPredicted RBP16.89■□□□□ 0.29
HNRNPC-218ENST00000555215 PLEKHD1A6NEE1 506 aa16.87■□□□□ 0.29
HNRNPC-218ENST00000555215 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
HNRNPC-218ENST00000555215 PHLDB1Q86UU1 1377 aa16.87■□□□□ 0.29
HNRNPC-218ENST00000555215 NEO1Q92859 1461 aa16.86■□□□□ 0.29
HNRNPC-218ENST00000555215 FRMPD1Q5SYB0 1578 aa16.86■□□□□ 0.29
HNRNPC-218ENST00000555215 CDK13Q14004 1512 aaKnown RBP16.83■□□□□ 0.28
HNRNPC-218ENST00000555215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.82■□□□□ 0.281e-13■■■□□ 15.2
HNRNPC-218ENST00000555215 EFCAB5A4FU69 1503 aa16.81■□□□□ 0.28
HNRNPC-218ENST00000555215 UBTFP17480 764 aaKnown RBP16.81■□□□□ 0.28
HNRNPC-218ENST00000555215 AKNAQ7Z591 1439 aa16.8■□□□□ 0.28
HNRNPC-218ENST00000555215 ADAMTSL3P82987 1691 aa16.79■□□□□ 0.28
HNRNPC-218ENST00000555215 TTC37Q6PGP7 1564 aa16.79■□□□□ 0.28
HNRNPC-218ENST00000555215 PTPRMP28827 1452 aa16.79■□□□□ 0.28
HNRNPC-218ENST00000555215 FANCAO15360 1455 aa16.78■□□□□ 0.28
HNRNPC-218ENST00000555215 DENND4BO75064 1496 aaPredicted RBP16.78■□□□□ 0.28
HNRNPC-218ENST00000555215 ARHGAP35Q9NRY4 1499 aa16.78■□□□□ 0.28
HNRNPC-218ENST00000555215 ARID4BQ4LE39 1312 aaPredicted RBP16.76■□□□□ 0.27
HNRNPC-218ENST00000555215 ATP1B4Q9UN42 357 aaPredicted RBP16.76■□□□□ 0.27
HNRNPC-218ENST00000555215 YEATS2Q9ULM3 1422 aa16.75■□□□□ 0.27
HNRNPC-218ENST00000555215 RICTORQ6R327 1708 aa16.74■□□□□ 0.27
HNRNPC-218ENST00000555215 BCORL1Q5H9F3 1711 aa16.73■□□□□ 0.27
HNRNPC-218ENST00000555215 MADDQ8WXG6 1647 aa16.72■□□□□ 0.27
HNRNPC-218ENST00000555215 SIGLEC1Q9BZZ2 1709 aa16.72■□□□□ 0.27
HNRNPC-218ENST00000555215 PLCH2O75038 1416 aa16.71■□□□□ 0.27
HNRNPC-218ENST00000555215 ARHGEF40Q8TER5 1519 aa16.71■□□□□ 0.27
HNRNPC-218ENST00000555215 SCAPERQ9BY12 1400 aa16.7■□□□□ 0.26
HNRNPC-218ENST00000555215 FMN1Q68DA7 1419 aa16.68■□□□□ 0.26
HNRNPC-218ENST00000555215 HECW1Q76N89 1606 aa16.67■□□□□ 0.26
HNRNPC-218ENST00000555215 ZMYM4Q5VZL5 1548 aa16.67■□□□□ 0.26
HNRNPC-218ENST00000555215 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
HNRNPC-218ENST00000555215 KIF14Q15058 1648 aa16.67■□□□□ 0.26
HNRNPC-218ENST00000555215 MLECQ14165 292 aa16.66■□□□□ 0.26
HNRNPC-218ENST00000555215 POGZQ7Z3K3 1410 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms