RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 CTTNBP2Q8WZ74 1663 aa26.81■■□□□ 1.88
SPTLC2-203ENST00000554901 IQGAP2Q13576 1575 aa26.8■■□□□ 1.88
SPTLC2-203ENST00000554901 UBTFP17480 764 aaKnown RBP26.78■■□□□ 1.88
SPTLC2-203ENST00000554901 SHROOM2Q13796 1616 aa26.74■■□□□ 1.87
SPTLC2-203ENST00000554901 JPH4Q96JJ6 628 aa26.74■■□□□ 1.87
SPTLC2-203ENST00000554901 EHMT2Q96KQ7 1210 aa26.71■■□□□ 1.87
SPTLC2-203ENST00000554901 TNIKQ9UKE5 1360 aa26.71■■□□□ 1.87
SPTLC2-203ENST00000554901 UGGT2Q9NYU1 1516 aa26.69■■□□□ 1.86
SPTLC2-203ENST00000554901 DNAJC5Q9H3Z4 198 aa26.65■■□□□ 1.86
SPTLC2-203ENST00000554901 PRG4Q92954 1404 aaPredicted RBP26.63■■□□□ 1.85
SPTLC2-203ENST00000554901 LOC105371045A0A1W2PR82 267 aa26.63■■□□□ 1.85
SPTLC2-203ENST00000554901 CARMIL2Q6F5E8 1435 aa26.61■■□□□ 1.85
SPTLC2-203ENST00000554901 ARHGEF11O15085 1522 aa26.58■■□□□ 1.84
SPTLC2-203ENST00000554901 DISP1Q96F81 1524 aa26.56■■□□□ 1.84
SPTLC2-203ENST00000554901 EFCAB5A4FU69 1503 aa26.54■■□□□ 1.84
SPTLC2-203ENST00000554901 SAMD9Q5K651 1589 aa26.52■■□□□ 1.84
SPTLC2-203ENST00000554901 KIAA0556O60303 1618 aa26.52■■□□□ 1.84
SPTLC2-203ENST00000554901 ERCC6L2Q5T890 1561 aa26.5■■□□□ 1.83
SPTLC2-203ENST00000554901 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
SPTLC2-203ENST00000554901 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
SPTLC2-203ENST00000554901 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
SPTLC2-203ENST00000554901 CLIP1P30622 1438 aa26.45■■□□□ 1.82
SPTLC2-203ENST00000554901 RANGAP1P46060 587 aaPredicted RBP26.44■■□□□ 1.82
SPTLC2-203ENST00000554901 CEP162Q5TB80 1403 aa26.44■■□□□ 1.82
SPTLC2-203ENST00000554901 ARHGAP35Q9NRY4 1499 aa26.43■■□□□ 1.82
SPTLC2-203ENST00000554901 PTPRGP23470 1445 aa26.4■■□□□ 1.82
SPTLC2-203ENST00000554901 ARAP1Q96P48 1450 aa26.39■■□□□ 1.82
SPTLC2-203ENST00000554901 P3H3Q8IVL6 736 aa26.36■■□□□ 1.81
SPTLC2-203ENST00000554901 FHOD3Q2V2M9 1422 aa26.35■■□□□ 1.81
SPTLC2-203ENST00000554901 FMN1Q68DA7 1419 aa26.29■■□□□ 1.8
SPTLC2-203ENST00000554901 CYB5RLQ6IPT4 315 aa26.28■■□□□ 1.8
SPTLC2-203ENST00000554901 TTBK1Q5TCY1 1321 aaPredicted RBP26.24■■□□□ 1.79
SPTLC2-203ENST00000554901 UACAQ9BZF9 1416 aa26.24■■□□□ 1.79
SPTLC2-203ENST00000554901 UHRF1BP1LA0JNW5 1464 aa26.22■■□□□ 1.79
SPTLC2-203ENST00000554901 ABCA8O94911 1581 aa26.21■■□□□ 1.79
SPTLC2-203ENST00000554901 PLB1Q6P1J6 1458 aa26.19■■□□□ 1.78
SPTLC2-203ENST00000554901 ABCC2Q92887 1545 aa26.18■■□□□ 1.78
SPTLC2-203ENST00000554901 RAPGEF6Q8TEU7 1601 aa26.15■■□□□ 1.78
SPTLC2-203ENST00000554901 ADCY10Q96PN6 1610 aa26.13■■□□□ 1.77
SPTLC2-203ENST00000554901 CASKIN1Q8WXD9 1431 aa26.12■■□□□ 1.77
SPTLC2-203ENST00000554901 VPS8Q8N3P4 1428 aa26.11■■□□□ 1.77
SPTLC2-203ENST00000554901 FYCO1Q9BQS8 1478 aa26.09■■□□□ 1.77
SPTLC2-203ENST00000554901 KDM5BQ9UGL1 1544 aa26.07■■□□□ 1.76
SPTLC2-203ENST00000554901 HECW1Q76N89 1606 aa26.07■■□□□ 1.76
SPTLC2-203ENST00000554901 NUP153P49790 1475 aaKnown RBP26.07■■□□□ 1.76
SPTLC2-203ENST00000554901 PCF11O94913 1555 aaKnown RBP26.06■■□□□ 1.76
SPTLC2-203ENST00000554901 NPM1P06748 294 aaKnown RBP eCLIP26.05■■□□□ 1.76
SPTLC2-203ENST00000554901 ATP10BO94823 1461 aa26■■□□□ 1.75
SPTLC2-203ENST00000554901 EPRSP07814 1512 aaKnown RBP25.98■■□□□ 1.75
SPTLC2-203ENST00000554901 CCDC18Q5T9S5 1454 aa25.98■■□□□ 1.75
SPTLC2-203ENST00000554901 ATP1B4Q9UN42 357 aaPredicted RBP25.98■■□□□ 1.75
SPTLC2-203ENST00000554901 ZCCHC11Q5TAX3 1644 aaKnown RBP25.96■■□□□ 1.75
SPTLC2-203ENST00000554901 MAPKBP1O60336 1514 aa25.94■■□□□ 1.74
SPTLC2-203ENST00000554901 CDK11AQ9UQ88 783 aaPredicted RBP25.89■■□□□ 1.74
SPTLC2-203ENST00000554901 CDK13Q14004 1512 aaKnown RBP25.89■■□□□ 1.74
SPTLC2-203ENST00000554901 ARID3CA6NKF2 412 aa25.88■■□□□ 1.73
SPTLC2-203ENST00000554901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.88■■□□□ 1.73
SPTLC2-203ENST00000554901 HNRNPUL2Q1KMD3 747 aaKnown RBP25.88■■□□□ 1.73
SPTLC2-203ENST00000554901 MAP3K1Q13233 1512 aa25.88■■□□□ 1.73
SPTLC2-203ENST00000554901 ASXL2Q76L83 1435 aa25.87■■□□□ 1.73
SPTLC2-203ENST00000554901 LRRIQ1Q96JM4 1722 aa25.87■■□□□ 1.73
SPTLC2-203ENST00000554901 PLEKHD1A6NEE1 506 aa25.84■■□□□ 1.73
SPTLC2-203ENST00000554901 WDR7Q9Y4E6 1490 aa25.84■■□□□ 1.73
SPTLC2-203ENST00000554901 APLP2Q06481 763 aa25.83■■□□□ 1.72
SPTLC2-203ENST00000554901 TIAM1Q13009 1591 aa25.81■■□□□ 1.72
SPTLC2-203ENST00000554901 CFAP43Q8NDM7 1665 aa25.8■■□□□ 1.72
SPTLC2-203ENST00000554901 TROQ12816 1431 aaPredicted RBP25.77■■□□□ 1.72
SPTLC2-203ENST00000554901 ABCC10Q5T3U5 1492 aa25.74■■□□□ 1.71
SPTLC2-203ENST00000554901 MTUS2Q5JR59 1369 aa25.73■■□□□ 1.71
SPTLC2-203ENST00000554901 EHBP1L1Q8N3D4 1523 aa25.71■■□□□ 1.71
SPTLC2-203ENST00000554901 MAGI3Q5TCQ9 1506 aa25.7■■□□□ 1.71
SPTLC2-203ENST00000554901 LRRC9Q6ZRR7 1453 aa25.7■■□□□ 1.7
SPTLC2-203ENST00000554901 GLI2P10070 1586 aa25.69■■□□□ 1.7
SPTLC2-203ENST00000554901 DIP2BQ9P265 1576 aa25.69■■□□□ 1.7
SPTLC2-203ENST00000554901 KCNH8Q96L42 1107 aa25.67■■□□□ 1.7
SPTLC2-203ENST00000554901 KIF14Q15058 1648 aa25.66■■□□□ 1.7
SPTLC2-203ENST00000554901 FAM69CQ0P6D2 419 aa25.63■■□□□ 1.69
SPTLC2-203ENST00000554901 KANK4Q5T7N3 995 aaPredicted RBP25.63■■□□□ 1.69
SPTLC2-203ENST00000554901 ABCA9Q8IUA7 1624 aa25.62■■□□□ 1.69
SPTLC2-203ENST00000554901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.59■■□□□ 1.69
SPTLC2-203ENST00000554901 KIF13AQ9H1H9 1805 aa25.58■■□□□ 1.69
SPTLC2-203ENST00000554901 SUPT6HQ7KZ85 1726 aaKnown RBP25.57■■□□□ 1.68
SPTLC2-203ENST00000554901 TRHP20396 242 aaPredicted RBP25.57■■□□□ 1.68
SPTLC2-203ENST00000554901 MAP3K4Q9Y6R4 1608 aa25.54■■□□□ 1.68
SPTLC2-203ENST00000554901 CD109Q6YHK3 1445 aa25.54■■□□□ 1.68
SPTLC2-203ENST00000554901 NCOA2Q15596 1464 aa25.53■■□□□ 1.68
SPTLC2-203ENST00000554901 TTC37Q6PGP7 1564 aa25.53■■□□□ 1.68
SPTLC2-203ENST00000554901 ARAP3Q8WWN8 1544 aa25.5■■□□□ 1.67
SPTLC2-203ENST00000554901 PLCH2O75038 1416 aa25.49■■□□□ 1.67
SPTLC2-203ENST00000554901 CCNB3Q8WWL7 1395 aa25.48■■□□□ 1.67
SPTLC2-203ENST00000554901 GPATCH8Q9UKJ3 1502 aaKnown RBP25.46■■□□□ 1.67
SPTLC2-203ENST00000554901 MYO5CQ9NQX4 1742 aa25.45■■□□□ 1.67
SPTLC2-203ENST00000554901 TEX14Q8IWB6 1497 aa25.45■■□□□ 1.66
SPTLC2-203ENST00000554901 PREX2Q70Z35 1606 aa25.43■■□□□ 1.66
SPTLC2-203ENST00000554901 ITSN2Q9NZM3 1697 aa25.42■■□□□ 1.66
SPTLC2-203ENST00000554901 CDC42BPAQ5VT25 1732 aa25.41■■□□□ 1.66
SPTLC2-203ENST00000554901 PHLDB1Q86UU1 1377 aa25.41■■□□□ 1.66
SPTLC2-203ENST00000554901 MYOM3Q5VTT5 1437 aa25.4■■□□□ 1.66
SPTLC2-203ENST00000554901 EFCAB2Q5VUJ9 269 aa25.4■■□□□ 1.66
SPTLC2-203ENST00000554901 NEO1Q92859 1461 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms