RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 SOGA1O94964 1423 aa14.41□□□□□ -0.1
RDH11-205ENST00000553816 AQRO60306 1485 aaKnown RBP eCLIP14.4□□□□□ -0.18e-7■■■■■ 28.7
RDH11-205ENST00000553816 TOP2BQ02880 1626 aa14.4□□□□□ -0.1
RDH11-205ENST00000553816 WRNQ14191 1432 aaPredicted RBP eCLIP14.39□□□□□ -0.11
RDH11-205ENST00000553816 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
RDH11-205ENST00000553816 TDRD9Q8NDG6 1382 aaKnown RBP14.35□□□□□ -0.11
RDH11-205ENST00000553816 PBRM1Q86U86 1689 aa14.32□□□□□ -0.12
RDH11-205ENST00000553816 CHD1O14646 1710 aa14.32□□□□□ -0.12
RDH11-205ENST00000553816 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
RDH11-205ENST00000553816 ABCA5Q8WWZ7 1642 aa14.3□□□□□ -0.12
RDH11-205ENST00000553816 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.13
RDH11-205ENST00000553816 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
RDH11-205ENST00000553816 SNAPC4Q5SXM2 1469 aa14.25□□□□□ -0.13
RDH11-205ENST00000553816 GRIN2BQ13224 1484 aa14.24□□□□□ -0.13
RDH11-205ENST00000553816 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
RDH11-205ENST00000553816 POLA2Q14181 598 aa14.21□□□□□ -0.13
RDH11-205ENST00000553816 CHRDL2Q6WN34 429 aa14.21□□□□□ -0.13
RDH11-205ENST00000553816 MAGI1Q96QZ7 1491 aaPredicted RBP14.19□□□□□ -0.14
RDH11-205ENST00000553816 FBLN2P98095 1184 aa14.18□□□□□ -0.14
RDH11-205ENST00000553816 ADAMTS12P58397 1594 aa14.15□□□□□ -0.14
RDH11-205ENST00000553816 SYNJ2O15056 1496 aa14.15□□□□□ -0.14
RDH11-205ENST00000553816 ERICH3Q5RHP9 1530 aa14.13□□□□□ -0.15
RDH11-205ENST00000553816 CHMP7Q8WUX9 453 aaPredicted RBP14.12□□□□□ -0.15
RDH11-205ENST00000553816 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
RDH11-205ENST00000553816 RIMBP3CA6NJZ7 1639 aa14.11□□□□□ -0.15
RDH11-205ENST00000553816 RIMBP3BA6NNM3 1639 aa14.11□□□□□ -0.15
RDH11-205ENST00000553816 RIMBP3Q9UFD9 1639 aa14.11□□□□□ -0.15
RDH11-205ENST00000553816 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
RDH11-205ENST00000553816 GRIN2AQ12879 1464 aa14.08□□□□□ -0.16
RDH11-205ENST00000553816 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
RDH11-205ENST00000553816 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
RDH11-205ENST00000553816 ARHGEF11O15085 1522 aa14.06□□□□□ -0.16
RDH11-205ENST00000553816 CEP170Q5SW79 1584 aa14.05□□□□□ -0.16
RDH11-205ENST00000553816 RUSC2Q8N2Y8 1516 aa14.05□□□□□ -0.16
RDH11-205ENST00000553816 IGF1RP08069 1367 aa14.04□□□□□ -0.16
RDH11-205ENST00000553816 CUL7Q14999 1698 aa14.02□□□□□ -0.16
RDH11-205ENST00000553816 TRIM41Q8WV44 630 aa14.02□□□□□ -0.17
RDH11-205ENST00000553816 NUP160Q12769 1436 aa14.01□□□□□ -0.17
RDH11-205ENST00000553816 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
RDH11-205ENST00000553816 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
RDH11-205ENST00000553816 ERCC6L2Q5T890 1561 aa13.96□□□□□ -0.18
RDH11-205ENST00000553816 SHROOM2Q13796 1616 aa13.95□□□□□ -0.18
RDH11-205ENST00000553816 CARMIL1Q5VZK9 1371 aa13.95□□□□□ -0.18
RDH11-205ENST00000553816 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
RDH11-205ENST00000553816 SP7Q8TDD2 431 aaPredicted RBP13.9□□□□□ -0.18
RDH11-205ENST00000553816 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
RDH11-205ENST00000553816 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
RDH11-205ENST00000553816 KIAA0586Q9BVV6 1533 aa13.85□□□□□ -0.19
RDH11-205ENST00000553816 JPH4Q96JJ6 628 aa13.85□□□□□ -0.19
RDH11-205ENST00000553816 PRG4Q92954 1404 aaPredicted RBP13.84□□□□□ -0.19
RDH11-205ENST00000553816 CTTNBP2Q8WZ74 1663 aa13.83□□□□□ -0.2
RDH11-205ENST00000553816 PRXQ9BXM0 1461 aa13.82□□□□□ -0.2
RDH11-205ENST00000553816 REM2Q8IYK8 340 aaPredicted RBP13.82□□□□□ -0.2
RDH11-205ENST00000553816 IQGAP2Q13576 1575 aa13.81□□□□□ -0.2
RDH11-205ENST00000553816 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
RDH11-205ENST00000553816 FAM9AQ8IZU1 332 aaPredicted RBP13.78□□□□□ -0.2
RDH11-205ENST00000553816 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
RDH11-205ENST00000553816 ZBTB12Q9Y330 459 aaPredicted RBP13.77□□□□□ -0.21
RDH11-205ENST00000553816 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
RDH11-205ENST00000553816 EEA1Q15075 1411 aa13.75□□□□□ -0.21
RDH11-205ENST00000553816 DISP1Q96F81 1524 aa13.73□□□□□ -0.21
RDH11-205ENST00000553816 UGGT2Q9NYU1 1516 aa13.73□□□□□ -0.21
RDH11-205ENST00000553816 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
RDH11-205ENST00000553816 PITPNM1O00562 1244 aa13.7□□□□□ -0.22
RDH11-205ENST00000553816 KIAA0556O60303 1618 aa13.7□□□□□ -0.22
RDH11-205ENST00000553816 KIF21BO75037 1637 aa13.7□□□□□ -0.22
RDH11-205ENST00000553816 ADCY10Q96PN6 1610 aa13.69□□□□□ -0.22
RDH11-205ENST00000553816 CARMIL2Q6F5E8 1435 aa13.67□□□□□ -0.22
RDH11-205ENST00000553816 TTBK1Q5TCY1 1321 aaPredicted RBP13.66□□□□□ -0.22
RDH11-205ENST00000553816 HAX1O00165 279 aa13.65□□□□□ -0.22
RDH11-205ENST00000553816 TNIKQ9UKE5 1360 aa13.65□□□□□ -0.22
RDH11-205ENST00000553816 PTPRGP23470 1445 aa13.64□□□□□ -0.23
RDH11-205ENST00000553816 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
RDH11-205ENST00000553816 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
RDH11-205ENST00000553816 KIF13AQ9H1H9 1805 aa13.61□□□□□ -0.23
RDH11-205ENST00000553816 SAMD9Q5K651 1589 aa13.61□□□□□ -0.23
RDH11-205ENST00000553816 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
RDH11-205ENST00000553816 P3H3Q8IVL6 736 aa13.57□□□□□ -0.24
RDH11-205ENST00000553816 ABCC2Q92887 1545 aa13.57□□□□□ -0.24
RDH11-205ENST00000553816 UACAQ9BZF9 1416 aa13.56□□□□□ -0.24
RDH11-205ENST00000553816 RANGAP1P46060 587 aaPredicted RBP13.56□□□□□ -0.24
RDH11-205ENST00000553816 UHRF1BP1LA0JNW5 1464 aa13.55□□□□□ -0.24
RDH11-205ENST00000553816 PLB1Q6P1J6 1458 aa13.55□□□□□ -0.24
RDH11-205ENST00000553816 MAPKBP1O60336 1514 aa13.55□□□□□ -0.24
RDH11-205ENST00000553816 EVX2Q03828 476 aa13.55□□□□□ -0.24
RDH11-205ENST00000553816 ABCA8O94911 1581 aa13.54□□□□□ -0.24
RDH11-205ENST00000553816 ZCCHC11Q5TAX3 1644 aaKnown RBP13.54□□□□□ -0.24
RDH11-205ENST00000553816 ZBTB22O15209 634 aa13.54□□□□□ -0.24
RDH11-205ENST00000553816 UBTFP17480 764 aaKnown RBP13.53□□□□□ -0.24
RDH11-205ENST00000553816 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
RDH11-205ENST00000553816 KDM5BQ9UGL1 1544 aa13.52□□□□□ -0.25
RDH11-205ENST00000553816 DIP2BQ9P265 1576 aa13.52□□□□□ -0.25
RDH11-205ENST00000553816 FHOD3Q2V2M9 1422 aa13.5□□□□□ -0.25
RDH11-205ENST00000553816 ABCC10Q5T3U5 1492 aa13.49□□□□□ -0.25
RDH11-205ENST00000553816 EFCAB5A4FU69 1503 aa13.49□□□□□ -0.25
RDH11-205ENST00000553816 RAPGEF6Q8TEU7 1601 aa13.48□□□□□ -0.25
RDH11-205ENST00000553816 TSPOAP1O95153 1857 aa13.47□□□□□ -0.25
RDH11-205ENST00000553816 ARHGAP35Q9NRY4 1499 aa13.47□□□□□ -0.25
RDH11-205ENST00000553816 ASXL2Q76L83 1435 aa13.47□□□□□ -0.25
RDH11-205ENST00000553816 FAM69CQ0P6D2 419 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms