RNA–Protein interactions for RNA: ENST00000553689.5

PAPOLA-205, Transcript of poly(A) polymerase alpha, humanhuman

TSL 1 (best)

Gene PAPOLA, Length 2,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-205ENST00000553689 KCNH8Q96L42 1107 aa27.13■■□□□ 1.93
PAPOLA-205ENST00000553689 CCER2I3L3R5 266 aa27.13■■□□□ 1.93
PAPOLA-205ENST00000553689 RAB3GAP2Q9H2M9 1393 aa27.12■■□□□ 1.93
PAPOLA-205ENST00000553689 RBM19Q9Y4C8 960 aaKnown RBP27.1■■□□□ 1.93
PAPOLA-205ENST00000553689 NEFLP07196 543 aa27.1■■□□□ 1.93
PAPOLA-205ENST00000553689 RANGAP1P46060 587 aaPredicted RBP27.08■■□□□ 1.93
PAPOLA-205ENST00000553689 ARHGAP35Q9NRY4 1499 aa27.06■■□□□ 1.92
PAPOLA-205ENST00000553689 KIF21AQ7Z4S6 1674 aa27.06■■□□□ 1.92
PAPOLA-205ENST00000553689 PPP1R15AO75807 674 aaPredicted RBP27.05■■□□□ 1.92
PAPOLA-205ENST00000553689 SETD5Q9C0A6 1442 aa27.05■■□□□ 1.92
PAPOLA-205ENST00000553689 KIF27Q86VH2 1401 aa27.03■■□□□ 1.92
PAPOLA-205ENST00000553689 BCANQ96GW7 911 aa27.01■■□□□ 1.91
PAPOLA-205ENST00000553689 WDR97A6NE52 1622 aa27.01■■□□□ 1.91
PAPOLA-205ENST00000553689 CUX1P39880 1505 aa26.99■■□□□ 1.91
PAPOLA-205ENST00000553689 TIAM1Q13009 1591 aa26.98■■□□□ 1.91
PAPOLA-205ENST00000553689 DDX10Q13206 875 aaKnown RBP26.95■■□□□ 1.91
PAPOLA-205ENST00000553689 ERCC6Q03468 1493 aa26.94■■□□□ 1.9
PAPOLA-205ENST00000553689 FANCIQ9NVI1 1328 aa26.9■■□□□ 1.9
PAPOLA-205ENST00000553689 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
PAPOLA-205ENST00000553689 ANP32CO43423 234 aa26.87■■□□□ 1.89
PAPOLA-205ENST00000553689 URB2Q14146 1524 aaKnown RBP26.86■■□□□ 1.89
PAPOLA-205ENST00000553689 TOPBP1Q92547 1522 aa26.85■■□□□ 1.89
PAPOLA-205ENST00000553689 LRRC9Q6ZRR7 1453 aa26.85■■□□□ 1.89
PAPOLA-205ENST00000553689 MRC2Q9UBG0 1479 aa26.83■■□□□ 1.89
PAPOLA-205ENST00000553689 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.81■■□□□ 1.88
PAPOLA-205ENST00000553689 ITGAEP38570 1179 aa26.8■■□□□ 1.88
PAPOLA-205ENST00000553689 MYT1LQ9UL68 1186 aa26.77■■□□□ 1.88
PAPOLA-205ENST00000553689 FGD5Q6ZNL6 1462 aa26.77■■□□□ 1.88
PAPOLA-205ENST00000553689 ERICH6BQ5W0A0 696 aa26.77■■□□□ 1.88
PAPOLA-205ENST00000553689 CFAP43Q8NDM7 1665 aa26.77■■□□□ 1.88
PAPOLA-205ENST00000553689 MSH5O43196 834 aa26.76■■□□□ 1.87
PAPOLA-205ENST00000553689 SIN3AQ96ST3 1273 aa26.74■■□□□ 1.87
PAPOLA-205ENST00000553689 PHLDB1Q86UU1 1377 aa26.74■■□□□ 1.87
PAPOLA-205ENST00000553689 FHAD1B1AJZ9 1412 aa26.72■■□□□ 1.87
PAPOLA-205ENST00000553689 TRIM52Q96A61 297 aa26.72■■□□□ 1.87
PAPOLA-205ENST00000553689 THOC2Q8NI27 1593 aaKnown RBP26.7■■□□□ 1.86
PAPOLA-205ENST00000553689 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.86
PAPOLA-205ENST00000553689 WDR62O43379 1518 aa26.69■■□□□ 1.86
PAPOLA-205ENST00000553689 CDK11AQ9UQ88 783 aaPredicted RBP26.66■■□□□ 1.86
PAPOLA-205ENST00000553689 IGF1RP08069 1367 aa26.62■■□□□ 1.85
PAPOLA-205ENST00000553689 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
PAPOLA-205ENST00000553689 FAM50AQ14320 339 aaKnown RBP26.55■■□□□ 1.84
PAPOLA-205ENST00000553689 TONSLQ96HA7 1378 aa26.55■■□□□ 1.84
PAPOLA-205ENST00000553689 ERICH6Q7L0X2 663 aa26.54■■□□□ 1.84
PAPOLA-205ENST00000553689 PCF11O94913 1555 aaKnown RBP26.54■■□□□ 1.84
PAPOLA-205ENST00000553689 AQRO60306 1485 aaKnown RBP eCLIP26.52■■□□□ 1.843e-8■■■■□ 26.3
PAPOLA-205ENST00000553689 ABCA10Q8WWZ4 1543 aa26.52■■□□□ 1.84
PAPOLA-205ENST00000553689 FYCO1Q9BQS8 1478 aa26.51■■□□□ 1.83
PAPOLA-205ENST00000553689 CARMIL1Q5VZK9 1371 aa26.5■■□□□ 1.83
PAPOLA-205ENST00000553689 UACAQ9BZF9 1416 aa26.5■■□□□ 1.83
PAPOLA-205ENST00000553689 TARBP1Q13395 1621 aaKnown RBP26.48■■□□□ 1.83
PAPOLA-205ENST00000553689 PPP4R2Q9NY27 417 aa26.48■■□□□ 1.83
PAPOLA-205ENST00000553689 HIRIP3Q9BW71 556 aaPredicted RBP26.46■■□□□ 1.83
PAPOLA-205ENST00000553689 HFM1A2PYH4 1435 aa26.46■■□□□ 1.83
PAPOLA-205ENST00000553689 EFCAB5A4FU69 1503 aa26.45■■□□□ 1.82
PAPOLA-205ENST00000553689 HNRNPUQ00839 825 aaKnown RBP eCLIP26.45■■□□□ 1.82
PAPOLA-205ENST00000553689 IFT140Q96RY7 1462 aa26.44■■□□□ 1.82
PAPOLA-205ENST00000553689 CCDC18Q5T9S5 1454 aa26.44■■□□□ 1.82
PAPOLA-205ENST00000553689 CASKIN1Q8WXD9 1431 aa26.43■■□□□ 1.82
PAPOLA-205ENST00000553689 KDM5BQ9UGL1 1544 aa26.42■■□□□ 1.82
PAPOLA-205ENST00000553689 FGD6Q6ZV73 1430 aa26.4■■□□□ 1.82
PAPOLA-205ENST00000553689 TDRD9Q8NDG6 1382 aaKnown RBP26.38■■□□□ 1.81
PAPOLA-205ENST00000553689 PTPN23Q9H3S7 1636 aa26.38■■□□□ 1.81
PAPOLA-205ENST00000553689 NCOA2Q15596 1464 aa26.38■■□□□ 1.81
PAPOLA-205ENST00000553689 ABCA5Q8WWZ7 1642 aa26.34■■□□□ 1.81
PAPOLA-205ENST00000553689 GAPVD1Q14C86 1478 aa26.32■■□□□ 1.8
PAPOLA-205ENST00000553689 ZNF608Q9ULD9 1512 aaPredicted RBP26.3■■□□□ 1.8
PAPOLA-205ENST00000553689 NAIPQ13075 1403 aa26.27■■□□□ 1.8
PAPOLA-205ENST00000553689 CNTLNQ9NXG0 1405 aa26.27■■□□□ 1.8
PAPOLA-205ENST00000553689 WASHC2AQ641Q2 1341 aa26.26■■□□□ 1.79
PAPOLA-205ENST00000553689 FMN1Q68DA7 1419 aa26.25■■□□□ 1.79
PAPOLA-205ENST00000553689 ZBED9Q6R2W3 1325 aa26.24■■□□□ 1.79
PAPOLA-205ENST00000553689 IRX6P78412 446 aaPredicted RBP26.24■■□□□ 1.79
PAPOLA-205ENST00000553689 DEKP35659 375 aaKnown RBP26.23■■□□□ 1.79
PAPOLA-205ENST00000553689 PTPRKQ15262 1439 aa26.23■■□□□ 1.79
PAPOLA-205ENST00000553689 FHOD3Q2V2M9 1422 aa26.23■■□□□ 1.79
PAPOLA-205ENST00000553689 EIF4G3O43432 1585 aaKnown RBP26.22■■□□□ 1.79
PAPOLA-205ENST00000553689 PBRM1Q86U86 1689 aa26.2■■□□□ 1.78
PAPOLA-205ENST00000553689 SNAPC4Q5SXM2 1469 aa26.18■■□□□ 1.78
PAPOLA-205ENST00000553689 HSPA5P11021 654 aaKnown RBP26.17■■□□□ 1.78
PAPOLA-205ENST00000553689 NOP58Q9Y2X3 529 aaKnown RBP26.17■■□□□ 1.78
PAPOLA-205ENST00000553689 GRIN2BQ13224 1484 aa26.17■■□□□ 1.78
PAPOLA-205ENST00000553689 HECW1Q76N89 1606 aa26.16■■□□□ 1.78
PAPOLA-205ENST00000553689 CUL7Q14999 1698 aa26.16■■□□□ 1.78
PAPOLA-205ENST00000553689 MYOM3Q5VTT5 1437 aa26.15■■□□□ 1.78
PAPOLA-205ENST00000553689 EIF4G2P78344 907 aaKnown RBP eCLIP26.15■■□□□ 1.78
PAPOLA-205ENST00000553689 CTTNBP2Q8WZ74 1663 aa26.15■■□□□ 1.78
PAPOLA-205ENST00000553689 NCOA1Q15788 1441 aa26.14■■□□□ 1.78
PAPOLA-205ENST00000553689 AKNAQ7Z591 1439 aa26.14■■□□□ 1.77
PAPOLA-205ENST00000553689 PRKRIP1Q9H875 184 aaPredicted RBP26.12■■□□□ 1.77
PAPOLA-205ENST00000553689 GCC2Q8IWJ2 1684 aa26.11■■□□□ 1.77
PAPOLA-205ENST00000553689 MTUS2Q5JR59 1369 aa26.1■■□□□ 1.77
PAPOLA-205ENST00000553689 ATP1B4Q9UN42 357 aaPredicted RBP26.08■■□□□ 1.77
PAPOLA-205ENST00000553689 CCDC7Q96M83 1385 aa26.07■■□□□ 1.76
PAPOLA-205ENST00000553689 SUPT6HQ7KZ85 1726 aaKnown RBP26.07■■□□□ 1.76
PAPOLA-205ENST00000553689 P3H3Q8IVL6 736 aa26.07■■□□□ 1.76
PAPOLA-205ENST00000553689 B4GALNT3Q6L9W6 998 aa26.07■■□□□ 1.76
PAPOLA-205ENST00000553689 EHBP1L1Q8N3D4 1523 aa26.06■■□□□ 1.76
PAPOLA-205ENST00000553689 ARHGEF11O15085 1522 aa26.05■■□□□ 1.76
PAPOLA-205ENST00000553689 SMG6Q86US8 1419 aaKnown RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms