RNA–Protein interactions for RNA: ENST00000553689.5

PAPOLA-205, Transcript of poly(A) polymerase alpha, humanhuman

TSL 1 (best)

Gene PAPOLA, Length 2,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-205ENST00000553689 NISCHQ9Y2I1 1504 aa37.34■■■■□ 3.57
PAPOLA-205ENST00000553689 CCDC180Q9P1Z9 1646 aa32.76■■■□□ 2.83
PAPOLA-205ENST00000553689 HRCP23327 699 aa32.15■■■□□ 2.74
PAPOLA-205ENST00000553689 SHROOM4Q9ULL8 1493 aa32■■■□□ 2.71
PAPOLA-205ENST00000553689 SUPT5HO00267 1087 aaKnown RBP31.83■■■□□ 2.69
PAPOLA-205ENST00000553689 ZCCHC6Q5VYS8 1495 aaKnown RBP31.74■■■□□ 2.67
PAPOLA-205ENST00000553689 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
PAPOLA-205ENST00000553689 CHIC1Q5VXU3 224 aa31.58■■■□□ 2.65
PAPOLA-205ENST00000553689 ABCC9O60706 1549 aa31.33■■■□□ 2.61
PAPOLA-205ENST00000553689 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
PAPOLA-205ENST00000553689 PCGF6Q9BYE7 350 aa31.33■■■□□ 2.61
PAPOLA-205ENST00000553689 PPARGC1BQ86YN6 1023 aaKnown RBP31.03■■■□□ 2.56
PAPOLA-205ENST00000553689 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
PAPOLA-205ENST00000553689 PELP1Q8IZL8 1130 aaKnown RBP30.89■■■□□ 2.53
PAPOLA-205ENST00000553689 TRIM26Q12899 539 aaPredicted RBP30.76■■■□□ 2.51
PAPOLA-205ENST00000553689 ZEB1P37275 1124 aaPredicted RBP30.62■■■□□ 2.49
PAPOLA-205ENST00000553689 NACADO15069 1562 aa30.6■■■□□ 2.49
PAPOLA-205ENST00000553689 LOC105371045A0A1W2PR82 267 aa30.49■■■□□ 2.47
PAPOLA-205ENST00000553689 RB1CC1Q8TDY2 1594 aa30.45■■■□□ 2.46
PAPOLA-205ENST00000553689 SCRIBQ14160 1630 aa30.09■■■□□ 2.41
PAPOLA-205ENST00000553689 SCAF1Q9H7N4 1312 aaKnown RBP30.06■■■□□ 2.4
PAPOLA-205ENST00000553689 UNC13AQ9UPW8 1703 aa29.8■■■□□ 2.36
PAPOLA-205ENST00000553689 RSF1Q96T23 1441 aaPredicted RBP29.78■■■□□ 2.36
PAPOLA-205ENST00000553689 MYT1Q01538 1121 aa29.74■■■□□ 2.35
PAPOLA-205ENST00000553689 TRIM41Q8WV44 630 aa29.73■■■□□ 2.35
PAPOLA-205ENST00000553689 ACIN1Q9UKV3 1341 aaKnown RBP29.59■■■□□ 2.33
PAPOLA-205ENST00000553689 BICRAQ9NZM4 1560 aa29.49■■■□□ 2.31
PAPOLA-205ENST00000553689 PABPN1Q86U42 306 aaKnown RBP eCLIP29.46■■■□□ 2.31
PAPOLA-205ENST00000553689 NEUROD1Q13562 356 aa29.34■■■□□ 2.29
PAPOLA-205ENST00000553689 CENPBP07199 599 aaPredicted RBP29.32■■■□□ 2.28
PAPOLA-205ENST00000553689 FAM9AQ8IZU1 332 aaPredicted RBP29.3■■■□□ 2.28
PAPOLA-205ENST00000553689 CCER1Q8TC90 406 aaPredicted RBP29.19■■■□□ 2.26
PAPOLA-205ENST00000553689 DIEXFQ68CQ4 756 aaKnown RBP29.17■■■□□ 2.26
PAPOLA-205ENST00000553689 GTF3C3Q9Y5Q9 886 aa29.14■■■□□ 2.26
PAPOLA-205ENST00000553689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.11■■■□□ 2.25
PAPOLA-205ENST00000553689 WRNQ14191 1432 aaPredicted RBP eCLIP29.09■■■□□ 2.25
PAPOLA-205ENST00000553689 CECR2Q9BXF3 1484 aa29.04■■■□□ 2.24
PAPOLA-205ENST00000553689 EIF4G1Q04637 1599 aaKnown RBP28.97■■■□□ 2.23
PAPOLA-205ENST00000553689 MROH2BQ7Z745 1585 aa28.93■■■□□ 2.22
PAPOLA-205ENST00000553689 BAZ1AQ9NRL2 1556 aaPredicted RBP28.89■■■□□ 2.21
PAPOLA-205ENST00000553689 EHMT2Q96KQ7 1210 aa28.83■■■□□ 2.21
PAPOLA-205ENST00000553689 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
PAPOLA-205ENST00000553689 WIZO95785 1651 aa28.79■■■□□ 2.2
PAPOLA-205ENST00000553689 ZNF316A6NFI3 1004 aaPredicted RBP28.78■■■□□ 2.2
PAPOLA-205ENST00000553689 CEP162Q5TB80 1403 aa28.69■■■□□ 2.18
PAPOLA-205ENST00000553689 TNIKQ9UKE5 1360 aa28.69■■■□□ 2.18
PAPOLA-205ENST00000553689 EEA1Q15075 1411 aa28.62■■■□□ 2.17
PAPOLA-205ENST00000553689 TOP2AP11388 1531 aaKnown RBP28.49■■■□□ 2.15
PAPOLA-205ENST00000553689 CCDC88BA6NC98 1476 aa28.49■■■□□ 2.15
PAPOLA-205ENST00000553689 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.14
PAPOLA-205ENST00000553689 CLSPNQ9HAW4 1339 aa28.43■■■□□ 2.14
PAPOLA-205ENST00000553689 SMARCA2P51531 1590 aa28.41■■■□□ 2.14
PAPOLA-205ENST00000553689 ATAD2BQ9ULI0 1458 aa28.41■■■□□ 2.14
PAPOLA-205ENST00000553689 ABCC8Q09428 1581 aa28.4■■■□□ 2.14
PAPOLA-205ENST00000553689 MIER1Q8N108 512 aa28.36■■■□□ 2.13
PAPOLA-205ENST00000553689 GOLGA3Q08378 1498 aa28.34■■■□□ 2.13
PAPOLA-205ENST00000553689 CC2D2AQ9P2K1 1620 aa28.34■■■□□ 2.13
PAPOLA-205ENST00000553689 SOGA1O94964 1423 aa28.33■■■□□ 2.13
PAPOLA-205ENST00000553689 CSRNP3Q8WYN3 585 aa28.31■■■□□ 2.12
PAPOLA-205ENST00000553689 YTHDC1Q96MU7 727 aaKnown RBP28.29■■■□□ 2.12
PAPOLA-205ENST00000553689 BAZ1BQ9UIG0 1483 aaKnown RBP28.26■■■□□ 2.11
PAPOLA-205ENST00000553689 NCAPD3P42695 1498 aa28.22■■■□□ 2.11
PAPOLA-205ENST00000553689 TTBK1Q5TCY1 1321 aaPredicted RBP28.2■■■□□ 2.1
PAPOLA-205ENST00000553689 HMGXB3Q12766 1538 aa28.17■■■□□ 2.1
PAPOLA-205ENST00000553689 UBTFP17480 764 aaKnown RBP28.14■■■□□ 2.1
PAPOLA-205ENST00000553689 KIF21BO75037 1637 aa28.13■■■□□ 2.09
PAPOLA-205ENST00000553689 CEP164Q9UPV0 1460 aa28.11■■■□□ 2.09
PAPOLA-205ENST00000553689 RUSC2Q8N2Y8 1516 aa28.1■■■□□ 2.09
PAPOLA-205ENST00000553689 VPS8Q8N3P4 1428 aa28.04■■■□□ 2.08
PAPOLA-205ENST00000553689 CLIP1P30622 1438 aa27.97■■■□□ 2.07
PAPOLA-205ENST00000553689 HNRNPUL2Q1KMD3 747 aaKnown RBP27.97■■■□□ 2.07
PAPOLA-205ENST00000553689 SUPT16HQ9Y5B9 1047 aaKnown RBP27.94■■■□□ 2.06
PAPOLA-205ENST00000553689 DNAJC5BQ9UF47 199 aa27.93■■■□□ 2.06
PAPOLA-205ENST00000553689 APLP2Q06481 763 aa27.8■■■□□ 2.04
PAPOLA-205ENST00000553689 DHX57Q6P158 1386 aaKnown RBP27.8■■■□□ 2.04
PAPOLA-205ENST00000553689 SYNJ1O43426 1573 aa27.75■■■□□ 2.03
PAPOLA-205ENST00000553689 ANP32EQ9BTT0 268 aa27.74■■■□□ 2.03
PAPOLA-205ENST00000553689 TSHZ2Q9NRE2 1034 aa27.72■■■□□ 2.03
PAPOLA-205ENST00000553689 CUX2O14529 1486 aa27.66■■■□□ 2.02
PAPOLA-205ENST00000553689 RAPGEF2Q9Y4G8 1499 aa27.64■■■□□ 2.01
PAPOLA-205ENST00000553689 RRBP1Q9P2E9 1410 aaKnown RBP27.57■■■□□ 2
PAPOLA-205ENST00000553689 ERICH3Q5RHP9 1530 aa27.56■■■□□ 2
PAPOLA-205ENST00000553689 CFTRP13569 1480 aa27.5■■□□□ 1.99
PAPOLA-205ENST00000553689 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
PAPOLA-205ENST00000553689 ARAP1Q96P48 1450 aa27.44■■□□□ 1.98
PAPOLA-205ENST00000553689 TOP2BQ02880 1626 aa27.44■■□□□ 1.98
PAPOLA-205ENST00000553689 PRXQ9BXM0 1461 aa27.41■■□□□ 1.98
PAPOLA-205ENST00000553689 NESP48681 1621 aa27.37■■□□□ 1.97
PAPOLA-205ENST00000553689 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
PAPOLA-205ENST00000553689 BIVM-ERCC5R4GMW8 1640 aa27.36■■□□□ 1.97
PAPOLA-205ENST00000553689 LAMC3Q9Y6N6 1575 aa27.35■■□□□ 1.97
PAPOLA-205ENST00000553689 BCL11AQ9H165 835 aa27.32■■□□□ 1.96
PAPOLA-205ENST00000553689 CCNB3Q8WWL7 1395 aa27.3■■□□□ 1.96
PAPOLA-205ENST00000553689 KANK4Q5T7N3 995 aaPredicted RBP27.27■■□□□ 1.96
PAPOLA-205ENST00000553689 MAPKBP1O60336 1514 aa27.23■■□□□ 1.95
PAPOLA-205ENST00000553689 FANCD2Q9BXW9 1451 aa27.2■■□□□ 1.94
PAPOLA-205ENST00000553689 MAP3K1Q13233 1512 aa27.17■■□□□ 1.94
PAPOLA-205ENST00000553689 PDS5BQ9NTI5 1447 aa27.16■■□□□ 1.94
PAPOLA-205ENST00000553689 FKBP8Q14318 412 aa27.15■■□□□ 1.94
PAPOLA-205ENST00000553689 TIMELESSQ9UNS1 1208 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms