RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 KIF13AQ9H1H9 1805 aa26.49■■□□□ 1.83
APEX1-204ENST00000553368 KIF27Q86VH2 1401 aa26.48■■□□□ 1.83
APEX1-204ENST00000553368 KIAA0586Q9BVV6 1533 aa26.48■■□□□ 1.83
APEX1-204ENST00000553368 CUL7Q14999 1698 aa26.45■■□□□ 1.82
APEX1-204ENST00000553368 AEBP2Q6ZN18 517 aaPredicted RBP26.43■■□□□ 1.82
APEX1-204ENST00000553368 ABCC10Q5T3U5 1492 aa26.38■■□□□ 1.81
APEX1-204ENST00000553368 NPM1P06748 294 aaKnown RBP eCLIP26.38■■□□□ 1.81
APEX1-204ENST00000553368 MAPKBP1O60336 1514 aa26.38■■□□□ 1.81
APEX1-204ENST00000553368 ADCY10Q96PN6 1610 aa26.37■■□□□ 1.81
APEX1-204ENST00000553368 CARMIL1Q5VZK9 1371 aa26.33■■□□□ 1.81
APEX1-204ENST00000553368 FAM69CQ0P6D2 419 aa26.33■■□□□ 1.81
APEX1-204ENST00000553368 DIP2BQ9P265 1576 aa26.29■■□□□ 1.8
APEX1-204ENST00000553368 PTPRGP23470 1445 aa26.23■■□□□ 1.79
APEX1-204ENST00000553368 CARMIL2Q6F5E8 1435 aa26.19■■□□□ 1.78
APEX1-204ENST00000553368 TNIKQ9UKE5 1360 aa26.19■■□□□ 1.78
APEX1-204ENST00000553368 IQGAP2Q13576 1575 aa26.16■■□□□ 1.78
APEX1-204ENST00000553368 ABCC2Q92887 1545 aa26.12■■□□□ 1.77
APEX1-204ENST00000553368 UHRF1BP1LA0JNW5 1464 aa26.09■■□□□ 1.77
APEX1-204ENST00000553368 DISP1Q96F81 1524 aa26.09■■□□□ 1.77
APEX1-204ENST00000553368 TTBK1Q5TCY1 1321 aaPredicted RBP26.08■■□□□ 1.77
APEX1-204ENST00000553368 RAPGEF2Q9Y4G8 1499 aa26.07■■□□□ 1.76
APEX1-204ENST00000553368 KDM6BO15054 1643 aa26.06■■□□□ 1.76
APEX1-204ENST00000553368 TSPOAP1O95153 1857 aa26.06■■□□□ 1.76
APEX1-204ENST00000553368 UACAQ9BZF9 1416 aa26.04■■□□□ 1.76
APEX1-204ENST00000553368 UGGT2Q9NYU1 1516 aa26.04■■□□□ 1.76
APEX1-204ENST00000553368 ASXL2Q76L83 1435 aa26.03■■□□□ 1.76
APEX1-204ENST00000553368 PLB1Q6P1J6 1458 aa26.03■■□□□ 1.76
APEX1-204ENST00000553368 GLI2P10070 1586 aa26.01■■□□□ 1.75
APEX1-204ENST00000553368 KDM5BQ9UGL1 1544 aa25.96■■□□□ 1.75
APEX1-204ENST00000553368 PPRC1Q5VV67 1664 aaKnown RBP25.94■■□□□ 1.74
APEX1-204ENST00000553368 KIAA0556O60303 1618 aa25.94■■□□□ 1.74
APEX1-204ENST00000553368 KDM4FA0A1W2PPD8 638 aa25.91■■□□□ 1.74
APEX1-204ENST00000553368 EPRSP07814 1512 aaKnown RBP25.88■■□□□ 1.73
APEX1-204ENST00000553368 ZCCHC11Q5TAX3 1644 aaKnown RBP25.86■■□□□ 1.73
APEX1-204ENST00000553368 CTTNBP2Q8WZ74 1663 aa25.83■■□□□ 1.73
APEX1-204ENST00000553368 MAP3K4Q9Y6R4 1608 aa25.83■■□□□ 1.73
APEX1-204ENST00000553368 PRXQ9BXM0 1461 aa25.8■■□□□ 1.72
APEX1-204ENST00000553368 GOLGA3Q08378 1498 aa25.79■■□□□ 1.72
APEX1-204ENST00000553368 COL17A1Q9UMD9 1497 aaPredicted RBP25.79■■□□□ 1.72
APEX1-204ENST00000553368 TEX14Q8IWB6 1497 aa25.75■■□□□ 1.71
APEX1-204ENST00000553368 WDR7Q9Y4E6 1490 aa25.75■■□□□ 1.71
APEX1-204ENST00000553368 ABCA8O94911 1581 aa25.73■■□□□ 1.71
APEX1-204ENST00000553368 ADGRL1O94910 1474 aa25.64■■□□□ 1.69
APEX1-204ENST00000553368 MAGI3Q5TCQ9 1506 aa25.63■■□□□ 1.69
APEX1-204ENST00000553368 CD109Q6YHK3 1445 aa25.62■■□□□ 1.69
APEX1-204ENST00000553368 CFAP43Q8NDM7 1665 aa25.61■■□□□ 1.69
APEX1-204ENST00000553368 KCNH8Q96L42 1107 aa25.58■■□□□ 1.69
APEX1-204ENST00000553368 CSRNP3Q8WYN3 585 aa25.56■■□□□ 1.68
APEX1-204ENST00000553368 ATP10BO94823 1461 aa25.53■■□□□ 1.68
APEX1-204ENST00000553368 P3H3Q8IVL6 736 aa25.52■■□□□ 1.68
APEX1-204ENST00000553368 FAM9AQ8IZU1 332 aaPredicted RBP25.51■■□□□ 1.67
APEX1-204ENST00000553368 SAMD9Q5K651 1589 aa25.5■■□□□ 1.67
APEX1-204ENST00000553368 ARAP3Q8WWN8 1544 aa25.43■■□□□ 1.66
APEX1-204ENST00000553368 ARID3CA6NKF2 412 aa25.43■■□□□ 1.66
APEX1-204ENST00000553368 EEA1Q15075 1411 aa25.43■■□□□ 1.66
APEX1-204ENST00000553368 ABCA9Q8IUA7 1624 aa25.41■■□□□ 1.66
APEX1-204ENST00000553368 RAPGEF6Q8TEU7 1601 aa25.41■■□□□ 1.66
APEX1-204ENST00000553368 PHLDB1Q86UU1 1377 aa25.38■■□□□ 1.65
APEX1-204ENST00000553368 NUP153P49790 1475 aaKnown RBP25.33■■□□□ 1.65
APEX1-204ENST00000553368 HECW2Q9P2P5 1572 aa25.31■■□□□ 1.64
APEX1-204ENST00000553368 KIF21BO75037 1637 aa25.31■■□□□ 1.64
APEX1-204ENST00000553368 NEO1Q92859 1461 aa25.3■■□□□ 1.64
APEX1-204ENST00000553368 FHOD3Q2V2M9 1422 aa25.29■■□□□ 1.64
APEX1-204ENST00000553368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.27■■□□□ 1.64
APEX1-204ENST00000553368 HNRNPUL2Q1KMD3 747 aaKnown RBP25.27■■□□□ 1.64
APEX1-204ENST00000553368 RAPGEF3O95398 923 aa25.24■■□□□ 1.63
APEX1-204ENST00000553368 RANGAP1P46060 587 aaPredicted RBP25.24■■□□□ 1.63
APEX1-204ENST00000553368 ILDR1Q86SU0 546 aaPredicted RBP25.21■■□□□ 1.63
APEX1-204ENST00000553368 EFCAB5A4FU69 1503 aa25.21■■□□□ 1.63
APEX1-204ENST00000553368 PLEKHD1A6NEE1 506 aa25.2■■□□□ 1.62
APEX1-204ENST00000553368 FRMPD1Q5SYB0 1578 aa25.19■■□□□ 1.62
APEX1-204ENST00000553368 ADAMTSL3P82987 1691 aa25.17■■□□□ 1.62
APEX1-204ENST00000553368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.12■■□□□ 1.61
APEX1-204ENST00000553368 PTPRMP28827 1452 aa25.11■■□□□ 1.61
APEX1-204ENST00000553368 AKNAQ7Z591 1439 aa25.11■■□□□ 1.61
APEX1-204ENST00000553368 DENND4BO75064 1496 aaPredicted RBP25.1■■□□□ 1.61
APEX1-204ENST00000553368 BCORL1Q5H9F3 1711 aa25.09■■□□□ 1.61
APEX1-204ENST00000553368 RICTORQ6R327 1708 aa25.09■■□□□ 1.61
APEX1-204ENST00000553368 FANCAO15360 1455 aa25.09■■□□□ 1.61
APEX1-204ENST00000553368 CFAP74Q9C0B2 1584 aa25.07■■□□□ 1.6
APEX1-204ENST00000553368 TTC37Q6PGP7 1564 aa25.05■■□□□ 1.6
APEX1-204ENST00000553368 CDK13Q14004 1512 aaKnown RBP25.05■■□□□ 1.6
APEX1-204ENST00000553368 ARHGEF40Q8TER5 1519 aa25.05■■□□□ 1.6
APEX1-204ENST00000553368 ARID4BQ4LE39 1312 aaPredicted RBP25.02■■□□□ 1.6
APEX1-204ENST00000553368 ZMYM4Q5VZL5 1548 aa25.01■■□□□ 1.59
APEX1-204ENST00000553368 MADDQ8WXG6 1647 aa25.01■■□□□ 1.59
APEX1-204ENST00000553368 UBTFP17480 764 aaKnown RBP24.99■■□□□ 1.59
APEX1-204ENST00000553368 ARHGAP35Q9NRY4 1499 aa24.98■■□□□ 1.59
APEX1-204ENST00000553368 PLCH2O75038 1416 aa24.98■■□□□ 1.59
APEX1-204ENST00000553368 FMN1Q68DA7 1419 aa24.98■■□□□ 1.59
APEX1-204ENST00000553368 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
APEX1-204ENST00000553368 MAGI2Q86UL8 1455 aa24.96■■□□□ 1.59
APEX1-204ENST00000553368 HECW1Q76N89 1606 aa24.94■■□□□ 1.58
APEX1-204ENST00000553368 YEATS2Q9ULM3 1422 aa24.94■■□□□ 1.58
APEX1-204ENST00000553368 ZFYVE16Q7Z3T8 1539 aa24.93■■□□□ 1.58
APEX1-204ENST00000553368 EHMT2Q96KQ7 1210 aa24.92■■□□□ 1.58
APEX1-204ENST00000553368 SCAPERQ9BY12 1400 aa24.92■■□□□ 1.58
APEX1-204ENST00000553368 RIMS1Q86UR5 1692 aaKnown RBP24.91■■□□□ 1.58
APEX1-204ENST00000553368 POGZQ7Z3K3 1410 aa24.9■■□□□ 1.58
APEX1-204ENST00000553368 SIGLEC1Q9BZZ2 1709 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms