RNA–Protein interactions for RNA: ENST00000553355.1

ARID4A-211, Transcript of AT-rich interaction domain 4A, humanhuman

TSL 3

Gene ARID4A, Length 619 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID4A-211ENST00000553355 TIAM1Q13009 1591 aa12.65□□□□□ -0.38
ARID4A-211ENST00000553355 CTTNBP2Q8WZ74 1663 aa12.65□□□□□ -0.38
ARID4A-211ENST00000553355 RANGAP1P46060 587 aaPredicted RBP12.65□□□□□ -0.38
ARID4A-211ENST00000553355 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.38
ARID4A-211ENST00000553355 ABCA5Q8WWZ7 1642 aa12.65□□□□□ -0.38
ARID4A-211ENST00000553355 RAD54L2Q9Y4B4 1467 aa12.64□□□□□ -0.39
ARID4A-211ENST00000553355 CFAP43Q8NDM7 1665 aa12.64□□□□□ -0.39
ARID4A-211ENST00000553355 CLSPNQ9HAW4 1339 aa12.62□□□□□ -0.39
ARID4A-211ENST00000553355 AQRO60306 1485 aaKnown RBP eCLIP12.61□□□□□ -0.39
ARID4A-211ENST00000553355 HNRNPUL2Q1KMD3 747 aaKnown RBP12.6□□□□□ -0.39
ARID4A-211ENST00000553355 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
ARID4A-211ENST00000553355 PCF11O94913 1555 aaKnown RBP12.58□□□□□ -0.4
ARID4A-211ENST00000553355 KANK4Q5T7N3 995 aaPredicted RBP12.58□□□□□ -0.4
ARID4A-211ENST00000553355 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
ARID4A-211ENST00000553355 CCNB3Q8WWL7 1395 aa12.57□□□□□ -0.4
ARID4A-211ENST00000553355 LRRC9Q6ZRR7 1453 aa12.57□□□□□ -0.4
ARID4A-211ENST00000553355 GAPVD1Q14C86 1478 aa12.55□□□□□ -0.4
ARID4A-211ENST00000553355 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
ARID4A-211ENST00000553355 TARBP1Q13395 1621 aaKnown RBP12.54□□□□□ -0.4
ARID4A-211ENST00000553355 SAMD9Q5K651 1589 aa12.53□□□□□ -0.4
ARID4A-211ENST00000553355 FMN1Q68DA7 1419 aa12.53□□□□□ -0.4
ARID4A-211ENST00000553355 THOC2Q8NI27 1593 aaKnown RBP12.52□□□□□ -0.4
ARID4A-211ENST00000553355 MRC2Q9UBG0 1479 aa12.51□□□□□ -0.41
ARID4A-211ENST00000553355 DHX57Q6P158 1386 aaKnown RBP12.5□□□□□ -0.41
ARID4A-211ENST00000553355 PBRM1Q86U86 1689 aa12.49□□□□□ -0.41
ARID4A-211ENST00000553355 FHOD3Q2V2M9 1422 aa12.49□□□□□ -0.41
ARID4A-211ENST00000553355 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
ARID4A-211ENST00000553355 SNAPC4Q5SXM2 1469 aa12.47□□□□□ -0.41
ARID4A-211ENST00000553355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.47□□□□□ -0.41
ARID4A-211ENST00000553355 DIEXFQ68CQ4 756 aaKnown RBP12.47□□□□□ -0.41
ARID4A-211ENST00000553355 TDRD9Q8NDG6 1382 aaKnown RBP12.46□□□□□ -0.41
ARID4A-211ENST00000553355 ADAMTS12P58397 1594 aa12.46□□□□□ -0.42
ARID4A-211ENST00000553355 WDR62O43379 1518 aa12.43□□□□□ -0.42
ARID4A-211ENST00000553355 PHLDB1Q86UU1 1377 aa12.43□□□□□ -0.42
ARID4A-211ENST00000553355 IFT140Q96RY7 1462 aa12.42□□□□□ -0.42
ARID4A-211ENST00000553355 GRIN2BQ13224 1484 aa12.41□□□□□ -0.42
ARID4A-211ENST00000553355 IQGAP2Q13576 1575 aa12.4□□□□□ -0.42
ARID4A-211ENST00000553355 SETD5Q9C0A6 1442 aa12.4□□□□□ -0.42
ARID4A-211ENST00000553355 EHBP1L1Q8N3D4 1523 aa12.4□□□□□ -0.42
ARID4A-211ENST00000553355 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.43
ARID4A-211ENST00000553355 RAB3GAP2Q9H2M9 1393 aa12.39□□□□□ -0.43
ARID4A-211ENST00000553355 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
ARID4A-211ENST00000553355 P3H3Q8IVL6 736 aa12.37□□□□□ -0.43
ARID4A-211ENST00000553355 DNAJC5BQ9UF47 199 aa12.37□□□□□ -0.43
ARID4A-211ENST00000553355 SUPT6HQ7KZ85 1726 aaKnown RBP12.37□□□□□ -0.43
ARID4A-211ENST00000553355 LRRIQ1Q96JM4 1722 aa12.36□□□□□ -0.43
ARID4A-211ENST00000553355 UGGT2Q9NYU1 1516 aa12.36□□□□□ -0.43
ARID4A-211ENST00000553355 FGD6Q6ZV73 1430 aa12.36□□□□□ -0.43
ARID4A-211ENST00000553355 MTUS2Q5JR59 1369 aa12.34□□□□□ -0.43
ARID4A-211ENST00000553355 MAPKBP1O60336 1514 aa12.34□□□□□ -0.43
ARID4A-211ENST00000553355 CENPBP07199 599 aaPredicted RBP12.33□□□□□ -0.44
ARID4A-211ENST00000553355 ARHGEF11O15085 1522 aa12.32□□□□□ -0.44
ARID4A-211ENST00000553355 MYOM3Q5VTT5 1437 aa12.31□□□□□ -0.44
ARID4A-211ENST00000553355 ATP1B4Q9UN42 357 aaPredicted RBP12.31□□□□□ -0.44
ARID4A-211ENST00000553355 NCOA2Q15596 1464 aa12.31□□□□□ -0.44
ARID4A-211ENST00000553355 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
ARID4A-211ENST00000553355 FAM50AQ14320 339 aaKnown RBP12.3□□□□□ -0.44
ARID4A-211ENST00000553355 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
ARID4A-211ENST00000553355 KIAA0586Q9BVV6 1533 aa12.29□□□□□ -0.44
ARID4A-211ENST00000553355 ITGAEP38570 1179 aa12.29□□□□□ -0.44
ARID4A-211ENST00000553355 MAGI1Q96QZ7 1491 aaPredicted RBP12.28□□□□□ -0.44
ARID4A-211ENST00000553355 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
ARID4A-211ENST00000553355 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
ARID4A-211ENST00000553355 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.44
ARID4A-211ENST00000553355 KIAA0556O60303 1618 aa12.27□□□□□ -0.44
ARID4A-211ENST00000553355 HFM1A2PYH4 1435 aa12.27□□□□□ -0.45
ARID4A-211ENST00000553355 GRIN2AQ12879 1464 aa12.27□□□□□ -0.45
ARID4A-211ENST00000553355 EPRSP07814 1512 aaKnown RBP12.27□□□□□ -0.45
ARID4A-211ENST00000553355 ZNF608Q9ULD9 1512 aaPredicted RBP12.27□□□□□ -0.45
ARID4A-211ENST00000553355 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
ARID4A-211ENST00000553355 AKNAQ7Z591 1439 aa12.25□□□□□ -0.45
ARID4A-211ENST00000553355 ERCC6Q03468 1493 aa12.25□□□□□ -0.45
ARID4A-211ENST00000553355 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
ARID4A-211ENST00000553355 MIA2Q96PC5 1412 aa12.24□□□□□ -0.45
ARID4A-211ENST00000553355 GCC2Q8IWJ2 1684 aa12.22□□□□□ -0.45
ARID4A-211ENST00000553355 UACAQ9BZF9 1416 aa12.22□□□□□ -0.45
ARID4A-211ENST00000553355 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
ARID4A-211ENST00000553355 DISP1Q96F81 1524 aa12.21□□□□□ -0.45
ARID4A-211ENST00000553355 SYNJ2O15056 1496 aa12.21□□□□□ -0.46
ARID4A-211ENST00000553355 RAPGEF6Q8TEU7 1601 aa12.2□□□□□ -0.46
ARID4A-211ENST00000553355 NAIPQ13075 1403 aa12.19□□□□□ -0.46
ARID4A-211ENST00000553355 CDK13Q14004 1512 aaKnown RBP12.18□□□□□ -0.46
ARID4A-211ENST00000553355 NEUROD1Q13562 356 aa12.18□□□□□ -0.46
ARID4A-211ENST00000553355 MIER1Q8N108 512 aa12.18□□□□□ -0.46
ARID4A-211ENST00000553355 DMRT2Q9Y5R5 561 aa12.18□□□□□ -0.46
ARID4A-211ENST00000553355 PTPRKQ15262 1439 aa12.18□□□□□ -0.46
ARID4A-211ENST00000553355 NUP160Q12769 1436 aa12.16□□□□□ -0.46
ARID4A-211ENST00000553355 CEP170Q5SW79 1584 aa12.16□□□□□ -0.46
ARID4A-211ENST00000553355 NUP153P49790 1475 aaKnown RBP12.15□□□□□ -0.46
ARID4A-211ENST00000553355 CARMIL2Q6F5E8 1435 aa12.13□□□□□ -0.47
ARID4A-211ENST00000553355 ADCY10Q96PN6 1610 aa12.13□□□□□ -0.47
ARID4A-211ENST00000553355 ITSN2Q9NZM3 1697 aa12.13□□□□□ -0.47
ARID4A-211ENST00000553355 DNMT1P26358 1616 aaKnown RBP12.12□□□□□ -0.47
ARID4A-211ENST00000553355 ROCK1Q13464 1354 aa12.12□□□□□ -0.47
ARID4A-211ENST00000553355 CDK11AQ9UQ88 783 aaPredicted RBP12.11□□□□□ -0.47
ARID4A-211ENST00000553355 TROQ12816 1431 aaPredicted RBP12.1□□□□□ -0.47
ARID4A-211ENST00000553355 TONSLQ96HA7 1378 aa12.09□□□□□ -0.47
ARID4A-211ENST00000553355 CHMP7Q8WUX9 453 aaPredicted RBP12.08□□□□□ -0.48
ARID4A-211ENST00000553355 SIN3AQ96ST3 1273 aa12.08□□□□□ -0.48
ARID4A-211ENST00000553355 DAPK1P53355 1430 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms