RNA–Protein interactions for RNA: ENST00000553355.1

ARID4A-211, Transcript of AT-rich interaction domain 4A, humanhuman

TSL 3

Gene ARID4A, Length 619 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID4A-211ENST00000553355 NISCHQ9Y2I1 1504 aa18.11■□□□□ 0.49
ARID4A-211ENST00000553355 AEBP2Q6ZN18 517 aaPredicted RBP17.98■□□□□ 0.47
ARID4A-211ENST00000553355 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
ARID4A-211ENST00000553355 CCDC180Q9P1Z9 1646 aa15.66■□□□□ 0.1
ARID4A-211ENST00000553355 SENP3Q9H4L4 574 aaPredicted RBP15.51■□□□□ 0.07
ARID4A-211ENST00000553355 ZCCHC6Q5VYS8 1495 aaKnown RBP15.32■□□□□ 0.04
ARID4A-211ENST00000553355 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
ARID4A-211ENST00000553355 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
ARID4A-211ENST00000553355 SHROOM4Q9ULL8 1493 aa14.95□□□□□ -0.02
ARID4A-211ENST00000553355 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
ARID4A-211ENST00000553355 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.05
ARID4A-211ENST00000553355 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
ARID4A-211ENST00000553355 SUPT5HO00267 1087 aaKnown RBP14.58□□□□□ -0.08
ARID4A-211ENST00000553355 FOXD1Q16676 465 aa14.5□□□□□ -0.09
ARID4A-211ENST00000553355 NACADO15069 1562 aa14.47□□□□□ -0.09
ARID4A-211ENST00000553355 ABCC9O60706 1549 aa14.45□□□□□ -0.1
ARID4A-211ENST00000553355 SCRIBQ14160 1630 aa14.37□□□□□ -0.11
ARID4A-211ENST00000553355 RB1CC1Q8TDY2 1594 aa14.22□□□□□ -0.13
ARID4A-211ENST00000553355 RSF1Q96T23 1441 aaPredicted RBP14.18□□□□□ -0.14
ARID4A-211ENST00000553355 MROH2BQ7Z745 1585 aa13.97□□□□□ -0.17
ARID4A-211ENST00000553355 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
ARID4A-211ENST00000553355 CECR2Q9BXF3 1484 aa13.97□□□□□ -0.17
ARID4A-211ENST00000553355 UNC13AQ9UPW8 1703 aa13.92□□□□□ -0.18
ARID4A-211ENST00000553355 MSH5O43196 834 aa13.89□□□□□ -0.19
ARID4A-211ENST00000553355 WIZO95785 1651 aa13.88□□□□□ -0.19
ARID4A-211ENST00000553355 SMARCA4P51532 1647 aa13.84□□□□□ -0.19
ARID4A-211ENST00000553355 TOP2AP11388 1531 aaKnown RBP13.81□□□□□ -0.2
ARID4A-211ENST00000553355 EIF4G1Q04637 1599 aaKnown RBP13.77□□□□□ -0.21
ARID4A-211ENST00000553355 BICRAQ9NZM4 1560 aa13.75□□□□□ -0.21
ARID4A-211ENST00000553355 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
ARID4A-211ENST00000553355 PEG3Q9GZU2 1588 aa13.69□□□□□ -0.22
ARID4A-211ENST00000553355 SMARCA2P51531 1590 aa13.67□□□□□ -0.22
ARID4A-211ENST00000553355 LOC105371045A0A1W2PR82 267 aa13.63□□□□□ -0.23
ARID4A-211ENST00000553355 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
ARID4A-211ENST00000553355 HRCP23327 699 aa13.52□□□□□ -0.25
ARID4A-211ENST00000553355 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
ARID4A-211ENST00000553355 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
ARID4A-211ENST00000553355 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
ARID4A-211ENST00000553355 TRIM26Q12899 539 aaPredicted RBP13.46□□□□□ -0.25
ARID4A-211ENST00000553355 EEA1Q15075 1411 aa13.46□□□□□ -0.26
ARID4A-211ENST00000553355 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
ARID4A-211ENST00000553355 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
ARID4A-211ENST00000553355 FAM9AQ8IZU1 332 aaPredicted RBP13.42□□□□□ -0.26
ARID4A-211ENST00000553355 HMGXB3Q12766 1538 aa13.38□□□□□ -0.27
ARID4A-211ENST00000553355 PIAS4Q8N2W9 510 aaPredicted RBP13.37□□□□□ -0.27
ARID4A-211ENST00000553355 WRNQ14191 1432 aaPredicted RBP eCLIP13.36□□□□□ -0.27
ARID4A-211ENST00000553355 NCAPD3P42695 1498 aa13.31□□□□□ -0.28
ARID4A-211ENST00000553355 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
ARID4A-211ENST00000553355 TNIKQ9UKE5 1360 aa13.27□□□□□ -0.29
ARID4A-211ENST00000553355 SOGA1O94964 1423 aa13.27□□□□□ -0.29
ARID4A-211ENST00000553355 KIF21BO75037 1637 aa13.25□□□□□ -0.29
ARID4A-211ENST00000553355 GOLGA3Q08378 1498 aa13.25□□□□□ -0.29
ARID4A-211ENST00000553355 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
ARID4A-211ENST00000553355 TOP2BQ02880 1626 aa13.22□□□□□ -0.29
ARID4A-211ENST00000553355 BIVM-ERCC5R4GMW8 1640 aa13.22□□□□□ -0.29
ARID4A-211ENST00000553355 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
ARID4A-211ENST00000553355 ZEB1P37275 1124 aaPredicted RBP13.21□□□□□ -0.29
ARID4A-211ENST00000553355 CEP164Q9UPV0 1460 aa13.2□□□□□ -0.3
ARID4A-211ENST00000553355 RUSC2Q8N2Y8 1516 aa13.18□□□□□ -0.3
ARID4A-211ENST00000553355 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
ARID4A-211ENST00000553355 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
ARID4A-211ENST00000553355 CFTRP13569 1480 aa13.13□□□□□ -0.31
ARID4A-211ENST00000553355 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.31
ARID4A-211ENST00000553355 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
ARID4A-211ENST00000553355 CUX1P39880 1505 aa13.06□□□□□ -0.32
ARID4A-211ENST00000553355 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
ARID4A-211ENST00000553355 CLIP1P30622 1438 aa13.02□□□□□ -0.33
ARID4A-211ENST00000553355 PRXQ9BXM0 1461 aa13.01□□□□□ -0.33
ARID4A-211ENST00000553355 RAPGEF2Q9Y4G8 1499 aa13.01□□□□□ -0.33
ARID4A-211ENST00000553355 PPP6R1Q9UPN7 881 aa13□□□□□ -0.33
ARID4A-211ENST00000553355 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
ARID4A-211ENST00000553355 KIF27Q86VH2 1401 aa12.99□□□□□ -0.33
ARID4A-211ENST00000553355 VPS8Q8N3P4 1428 aa12.99□□□□□ -0.33
ARID4A-211ENST00000553355 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
ARID4A-211ENST00000553355 ADRA2BP18089 450 aa12.9□□□□□ -0.34
ARID4A-211ENST00000553355 DNMBPQ6XZF7 1577 aa12.85□□□□□ -0.35
ARID4A-211ENST00000553355 FGD5Q6ZNL6 1462 aa12.85□□□□□ -0.35
ARID4A-211ENST00000553355 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
ARID4A-211ENST00000553355 FANCD2Q9BXW9 1451 aa12.85□□□□□ -0.35
ARID4A-211ENST00000553355 CUX2O14529 1486 aa12.84□□□□□ -0.35
ARID4A-211ENST00000553355 APLP2Q06481 763 aa12.83□□□□□ -0.36
ARID4A-211ENST00000553355 PLPPR3Q6T4P5 718 aa12.82□□□□□ -0.36
ARID4A-211ENST00000553355 CCER1Q8TC90 406 aaPredicted RBP12.82□□□□□ -0.36
ARID4A-211ENST00000553355 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
ARID4A-211ENST00000553355 IGF1RP08069 1367 aa12.78□□□□□ -0.36
ARID4A-211ENST00000553355 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
ARID4A-211ENST00000553355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.77□□□□□ -0.37
ARID4A-211ENST00000553355 TOPBP1Q92547 1522 aa12.76□□□□□ -0.37
ARID4A-211ENST00000553355 ARHGAP35Q9NRY4 1499 aa12.75□□□□□ -0.37
ARID4A-211ENST00000553355 CUL7Q14999 1698 aa12.74□□□□□ -0.37
ARID4A-211ENST00000553355 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
ARID4A-211ENST00000553355 CARMIL1Q5VZK9 1371 aa12.74□□□□□ -0.37
ARID4A-211ENST00000553355 TTBK1Q5TCY1 1321 aaPredicted RBP12.74□□□□□ -0.37
ARID4A-211ENST00000553355 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
ARID4A-211ENST00000553355 WDR97A6NE52 1622 aa12.71□□□□□ -0.37
ARID4A-211ENST00000553355 EFCAB5A4FU69 1503 aa12.68□□□□□ -0.38
ARID4A-211ENST00000553355 PDS5BQ9NTI5 1447 aa12.68□□□□□ -0.38
ARID4A-211ENST00000553355 RRBP1Q9P2E9 1410 aaKnown RBP12.68□□□□□ -0.38
ARID4A-211ENST00000553355 NESP48681 1621 aa12.67□□□□□ -0.38
ARID4A-211ENST00000553355 FHAD1B1AJZ9 1412 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms