RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 RUSC2Q8N2Y8 1516 aa23.81■■□□□ 1.4
SMARCC2-212ENST00000552566 CARMIL1Q5VZK9 1371 aa23.79■■□□□ 1.4
SMARCC2-212ENST00000552566 KIAA0586Q9BVV6 1533 aa23.79■■□□□ 1.4
SMARCC2-212ENST00000552566 NPM1P06748 294 aaKnown RBP eCLIP23.78■■□□□ 1.4
SMARCC2-212ENST00000552566 TTBK1Q5TCY1 1321 aaPredicted RBP23.74■■□□□ 1.39
SMARCC2-212ENST00000552566 CUL7Q14999 1698 aa23.72■■□□□ 1.39
SMARCC2-212ENST00000552566 FAM69CQ0P6D2 419 aa23.67■■□□□ 1.38
SMARCC2-212ENST00000552566 PTPRGP23470 1445 aa23.63■■□□□ 1.37
SMARCC2-212ENST00000552566 AEBP2Q6ZN18 517 aaPredicted RBP23.63■■□□□ 1.37
SMARCC2-212ENST00000552566 CARMIL2Q6F5E8 1435 aa23.59■■□□□ 1.37
SMARCC2-212ENST00000552566 ABCC10Q5T3U5 1492 aa23.57■■□□□ 1.36
SMARCC2-212ENST00000552566 ADCY10Q96PN6 1610 aa23.57■■□□□ 1.36
SMARCC2-212ENST00000552566 TNIKQ9UKE5 1360 aa23.56■■□□□ 1.36
SMARCC2-212ENST00000552566 RAPGEF2Q9Y4G8 1499 aa23.54■■□□□ 1.36
SMARCC2-212ENST00000552566 MAPKBP1O60336 1514 aa23.54■■□□□ 1.36
SMARCC2-212ENST00000552566 IQGAP2Q13576 1575 aa23.52■■□□□ 1.36
SMARCC2-212ENST00000552566 KIF13AQ9H1H9 1805 aa23.45■■□□□ 1.34
SMARCC2-212ENST00000552566 DIP2BQ9P265 1576 aa23.44■■□□□ 1.34
SMARCC2-212ENST00000552566 DISP1Q96F81 1524 aa23.43■■□□□ 1.34
SMARCC2-212ENST00000552566 ABCC2Q92887 1545 aa23.42■■□□□ 1.34
SMARCC2-212ENST00000552566 UACAQ9BZF9 1416 aa23.42■■□□□ 1.34
SMARCC2-212ENST00000552566 ASXL2Q76L83 1435 aa23.38■■□□□ 1.33
SMARCC2-212ENST00000552566 UGGT2Q9NYU1 1516 aa23.37■■□□□ 1.33
SMARCC2-212ENST00000552566 UHRF1BP1LA0JNW5 1464 aa23.36■■□□□ 1.33
SMARCC2-212ENST00000552566 PLB1Q6P1J6 1458 aa23.34■■□□□ 1.33
SMARCC2-212ENST00000552566 KIAA0556O60303 1618 aa23.29■■□□□ 1.32
SMARCC2-212ENST00000552566 PRXQ9BXM0 1461 aa23.28■■□□□ 1.32
SMARCC2-212ENST00000552566 KDM5BQ9UGL1 1544 aa23.26■■□□□ 1.31
SMARCC2-212ENST00000552566 KDM6BO15054 1643 aa23.25■■□□□ 1.31
SMARCC2-212ENST00000552566 GOLGA3Q08378 1498 aa23.24■■□□□ 1.31
SMARCC2-212ENST00000552566 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
SMARCC2-212ENST00000552566 P3H3Q8IVL6 736 aa23.21■■□□□ 1.31
SMARCC2-212ENST00000552566 TSPOAP1O95153 1857 aa23.2■■□□□ 1.3
SMARCC2-212ENST00000552566 EPRSP07814 1512 aaKnown RBP23.2■■□□□ 1.3
SMARCC2-212ENST00000552566 GLI2P10070 1586 aa23.19■■□□□ 1.3
SMARCC2-212ENST00000552566 FAM9AQ8IZU1 332 aaPredicted RBP23.17■■□□□ 1.3
SMARCC2-212ENST00000552566 KCNH8Q96L42 1107 aa23.16■■□□□ 1.3
SMARCC2-212ENST00000552566 ARID3CA6NKF2 412 aa23.15■■□□□ 1.3
SMARCC2-212ENST00000552566 ZCCHC11Q5TAX3 1644 aaKnown RBP23.15■■□□□ 1.3
SMARCC2-212ENST00000552566 CTTNBP2Q8WZ74 1663 aa23.14■■□□□ 1.29
SMARCC2-212ENST00000552566 WDR7Q9Y4E6 1490 aa23.13■■□□□ 1.29
SMARCC2-212ENST00000552566 KDM4FA0A1W2PPD8 638 aa23.12■■□□□ 1.29
SMARCC2-212ENST00000552566 RANGAP1P46060 587 aaPredicted RBP23.12■■□□□ 1.29
SMARCC2-212ENST00000552566 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
SMARCC2-212ENST00000552566 TEX14Q8IWB6 1497 aa23.08■■□□□ 1.29
SMARCC2-212ENST00000552566 ABCA8O94911 1581 aa23.07■■□□□ 1.28
SMARCC2-212ENST00000552566 COL17A1Q9UMD9 1497 aaPredicted RBP23.06■■□□□ 1.28
SMARCC2-212ENST00000552566 PPRC1Q5VV67 1664 aaKnown RBP23.05■■□□□ 1.28
SMARCC2-212ENST00000552566 EEA1Q15075 1411 aa23.03■■□□□ 1.28
SMARCC2-212ENST00000552566 CD109Q6YHK3 1445 aa23.03■■□□□ 1.28
SMARCC2-212ENST00000552566 MAP3K4Q9Y6R4 1608 aa23.03■■□□□ 1.28
SMARCC2-212ENST00000552566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23■■□□□ 1.27
SMARCC2-212ENST00000552566 HNRNPUL2Q1KMD3 747 aaKnown RBP23■■□□□ 1.27
SMARCC2-212ENST00000552566 ATP10BO94823 1461 aa22.96■■□□□ 1.27
SMARCC2-212ENST00000552566 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
SMARCC2-212ENST00000552566 MAGI3Q5TCQ9 1506 aa22.92■■□□□ 1.26
SMARCC2-212ENST00000552566 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
SMARCC2-212ENST00000552566 ADGRL1O94910 1474 aa22.9■■□□□ 1.26
SMARCC2-212ENST00000552566 SAMD9Q5K651 1589 aa22.89■■□□□ 1.26
SMARCC2-212ENST00000552566 CFAP43Q8NDM7 1665 aa22.84■■□□□ 1.25
SMARCC2-212ENST00000552566 UBTFP17480 764 aaKnown RBP22.84■■□□□ 1.25
SMARCC2-212ENST00000552566 RAPGEF6Q8TEU7 1601 aa22.82■■□□□ 1.24
SMARCC2-212ENST00000552566 NUP153P49790 1475 aaKnown RBP22.82■■□□□ 1.24
SMARCC2-212ENST00000552566 PLEKHD1A6NEE1 506 aa22.8■■□□□ 1.24
SMARCC2-212ENST00000552566 KIF21BO75037 1637 aa22.76■■□□□ 1.23
SMARCC2-212ENST00000552566 RAPGEF3O95398 923 aa22.76■■□□□ 1.23
SMARCC2-212ENST00000552566 ATP1B4Q9UN42 357 aaPredicted RBP22.75■■□□□ 1.23
SMARCC2-212ENST00000552566 PHLDB1Q86UU1 1377 aa22.75■■□□□ 1.23
SMARCC2-212ENST00000552566 ARAP3Q8WWN8 1544 aa22.74■■□□□ 1.23
SMARCC2-212ENST00000552566 ABCA9Q8IUA7 1624 aa22.72■■□□□ 1.23
SMARCC2-212ENST00000552566 EFCAB5A4FU69 1503 aa22.72■■□□□ 1.23
SMARCC2-212ENST00000552566 NEO1Q92859 1461 aa22.68■■□□□ 1.22
SMARCC2-212ENST00000552566 ARID4BQ4LE39 1312 aaPredicted RBP22.62■■□□□ 1.21
SMARCC2-212ENST00000552566 CDK13Q14004 1512 aaKnown RBP22.62■■□□□ 1.21
SMARCC2-212ENST00000552566 FMN1Q68DA7 1419 aa22.6■■□□□ 1.21
SMARCC2-212ENST00000552566 ARHGAP35Q9NRY4 1499 aa22.59■■□□□ 1.21
SMARCC2-212ENST00000552566 AKNAQ7Z591 1439 aa22.58■■□□□ 1.21
SMARCC2-212ENST00000552566 FANCAO15360 1455 aa22.58■■□□□ 1.2
SMARCC2-212ENST00000552566 DENND4BO75064 1496 aaPredicted RBP22.58■■□□□ 1.2
SMARCC2-212ENST00000552566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.57■■□□□ 1.2
SMARCC2-212ENST00000552566 CDK11AQ9UQ88 783 aaPredicted RBP22.56■■□□□ 1.2
SMARCC2-212ENST00000552566 FRMPD1Q5SYB0 1578 aa22.51■■□□□ 1.19
SMARCC2-212ENST00000552566 TTC37Q6PGP7 1564 aa22.51■■□□□ 1.19
SMARCC2-212ENST00000552566 HECW2Q9P2P5 1572 aa22.51■■□□□ 1.19
SMARCC2-212ENST00000552566 PLCH2O75038 1416 aa22.48■■□□□ 1.19
SMARCC2-212ENST00000552566 HECW1Q76N89 1606 aa22.48■■□□□ 1.19
SMARCC2-212ENST00000552566 EFCAB2Q5VUJ9 269 aa22.47■■□□□ 1.19
SMARCC2-212ENST00000552566 SCAPERQ9BY12 1400 aa22.47■■□□□ 1.19
SMARCC2-212ENST00000552566 PTPRMP28827 1452 aa22.45■■□□□ 1.18
SMARCC2-212ENST00000552566 CFAP74Q9C0B2 1584 aa22.43■■□□□ 1.18
SMARCC2-212ENST00000552566 TROQ12816 1431 aaPredicted RBP22.42■■□□□ 1.18
SMARCC2-212ENST00000552566 YEATS2Q9ULM3 1422 aa22.42■■□□□ 1.18
SMARCC2-212ENST00000552566 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
SMARCC2-212ENST00000552566 CLIP1P30622 1438 aa22.41■■□□□ 1.18
SMARCC2-212ENST00000552566 MLECQ14165 292 aa22.41■■□□□ 1.18
SMARCC2-212ENST00000552566 ARHGEF40Q8TER5 1519 aa22.41■■□□□ 1.18
SMARCC2-212ENST00000552566 ILDR1Q86SU0 546 aaPredicted RBP22.4■■□□□ 1.18
SMARCC2-212ENST00000552566 POGZQ7Z3K3 1410 aa22.39■■□□□ 1.17
SMARCC2-212ENST00000552566 ZFYVE16Q7Z3T8 1539 aa22.38■■□□□ 1.17
SMARCC2-212ENST00000552566 ADAMTSL3P82987 1691 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms