RNA–Protein interactions for RNA: ENST00000552442.1

UBE2N-206, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 5 BASIC

Gene UBE2N, Length 607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-206ENST00000552442 FGD5Q6ZNL6 1462 aa16.06■□□□□ 0.16
UBE2N-206ENST00000552442 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
UBE2N-206ENST00000552442 RAD54L2Q9Y4B4 1467 aa16.03■□□□□ 0.16
UBE2N-206ENST00000552442 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
UBE2N-206ENST00000552442 SOGA1O94964 1423 aa16.01■□□□□ 0.15
UBE2N-206ENST00000552442 AQRO60306 1485 aaKnown RBP eCLIP15.99■□□□□ 0.15
UBE2N-206ENST00000552442 CHD1O14646 1710 aa15.99■□□□□ 0.15
UBE2N-206ENST00000552442 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
UBE2N-206ENST00000552442 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
UBE2N-206ENST00000552442 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
UBE2N-206ENST00000552442 PBRM1Q86U86 1689 aa15.93■□□□□ 0.14
UBE2N-206ENST00000552442 SYNJ1O43426 1573 aa15.93■□□□□ 0.14
UBE2N-206ENST00000552442 TDRD9Q8NDG6 1382 aaKnown RBP15.93■□□□□ 0.14
UBE2N-206ENST00000552442 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
UBE2N-206ENST00000552442 ABCA5Q8WWZ7 1642 aa15.89■□□□□ 0.13
UBE2N-206ENST00000552442 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
UBE2N-206ENST00000552442 GRIN2BQ13224 1484 aa15.87■□□□□ 0.13
UBE2N-206ENST00000552442 SNAPC4Q5SXM2 1469 aa15.87■□□□□ 0.13
UBE2N-206ENST00000552442 MAGI1Q96QZ7 1491 aaPredicted RBP15.85■□□□□ 0.13
UBE2N-206ENST00000552442 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
UBE2N-206ENST00000552442 FBLN2P98095 1184 aa15.82■□□□□ 0.12
UBE2N-206ENST00000552442 RIMBP3CA6NJZ7 1639 aa15.81■□□□□ 0.12
UBE2N-206ENST00000552442 RIMBP3BA6NNM3 1639 aa15.81■□□□□ 0.12
UBE2N-206ENST00000552442 DSG3P32926 999 aa15.81■□□□□ 0.12
UBE2N-206ENST00000552442 RIMBP3Q9UFD9 1639 aa15.81■□□□□ 0.12
UBE2N-206ENST00000552442 ABCB7O75027 752 aa15.79■□□□□ 0.12
UBE2N-206ENST00000552442 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
UBE2N-206ENST00000552442 ARHGEF11O15085 1522 aa15.76■□□□□ 0.11
UBE2N-206ENST00000552442 POLA2Q14181 598 aa15.75■□□□□ 0.11
UBE2N-206ENST00000552442 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
UBE2N-206ENST00000552442 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
UBE2N-206ENST00000552442 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
UBE2N-206ENST00000552442 CLASP1Q7Z460 1538 aa15.73■□□□□ 0.11
UBE2N-206ENST00000552442 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
UBE2N-206ENST00000552442 GRIN2AQ12879 1464 aa15.67■□□□□ 0.1
UBE2N-206ENST00000552442 FHAD1B1AJZ9 1412 aa15.65■□□□□ 0.1
UBE2N-206ENST00000552442 ARAP1Q96P48 1450 aa15.62■□□□□ 0.09
UBE2N-206ENST00000552442 CEP170Q5SW79 1584 aa15.62■□□□□ 0.09
UBE2N-206ENST00000552442 CUL7Q14999 1698 aa15.6■□□□□ 0.09
UBE2N-206ENST00000552442 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
UBE2N-206ENST00000552442 ZBTB12Q9Y330 459 aaPredicted RBP15.59■□□□□ 0.09
UBE2N-206ENST00000552442 NUP160Q12769 1436 aa15.59■□□□□ 0.09
UBE2N-206ENST00000552442 CYB5RLQ6IPT4 315 aa15.56■□□□□ 0.08
UBE2N-206ENST00000552442 SHROOM2Q13796 1616 aa15.55■□□□□ 0.08
UBE2N-206ENST00000552442 RUSC2Q8N2Y8 1516 aa15.52■□□□□ 0.07
UBE2N-206ENST00000552442 IGF1RP08069 1367 aa15.5■□□□□ 0.07
UBE2N-206ENST00000552442 ERCC6L2Q5T890 1561 aa15.49■□□□□ 0.07
UBE2N-206ENST00000552442 CARMIL1Q5VZK9 1371 aa15.43■□□□□ 0.06
UBE2N-206ENST00000552442 PRG4Q92954 1404 aaPredicted RBP15.41■□□□□ 0.06
UBE2N-206ENST00000552442 KIAA0586Q9BVV6 1533 aa15.4■□□□□ 0.06
UBE2N-206ENST00000552442 MKRN4PQ13434 485 aaPredicted RBP15.39■□□□□ 0.05
UBE2N-206ENST00000552442 JPH4Q96JJ6 628 aa15.39■□□□□ 0.05
UBE2N-206ENST00000552442 RAPGEF2Q9Y4G8 1499 aa15.35■□□□□ 0.05
UBE2N-206ENST00000552442 IQGAP2Q13576 1575 aa15.35■□□□□ 0.05
UBE2N-206ENST00000552442 CTTNBP2Q8WZ74 1663 aa15.34■□□□□ 0.05
UBE2N-206ENST00000552442 ADCY10Q96PN6 1610 aa15.25■□□□□ 0.03
UBE2N-206ENST00000552442 PRXQ9BXM0 1461 aa15.25■□□□□ 0.03
UBE2N-206ENST00000552442 CARMIL2Q6F5E8 1435 aa15.25■□□□□ 0.03
UBE2N-206ENST00000552442 UGGT2Q9NYU1 1516 aa15.23■□□□□ 0.03
UBE2N-206ENST00000552442 KIF13AQ9H1H9 1805 aa15.22■□□□□ 0.03
UBE2N-206ENST00000552442 KIAA0556O60303 1618 aa15.21■□□□□ 0.03
UBE2N-206ENST00000552442 DISP1Q96F81 1524 aa15.21■□□□□ 0.03
UBE2N-206ENST00000552442 EEA1Q15075 1411 aa15.2■□□□□ 0.02
UBE2N-206ENST00000552442 TNIKQ9UKE5 1360 aa15.2■□□□□ 0.02
UBE2N-206ENST00000552442 PTPRGP23470 1445 aa15.19■□□□□ 0.02
UBE2N-206ENST00000552442 MAPKBP1O60336 1514 aa15.17■□□□□ 0.02
UBE2N-206ENST00000552442 RBM42Q9BTD8 480 aaKnown RBP15.16■□□□□ 0.02
UBE2N-206ENST00000552442 TTBK1Q5TCY1 1321 aaPredicted RBP15.16■□□□□ 0.02
UBE2N-206ENST00000552442 NPM1P06748 294 aaKnown RBP eCLIP15.15■□□□□ 0.02
UBE2N-206ENST00000552442 FKBP8Q14318 412 aa15.15■□□□□ 0.02
UBE2N-206ENST00000552442 GOLGA3Q08378 1498 aa15.14■□□□□ 0.01
UBE2N-206ENST00000552442 SPDYE2BA6NHP3 402 aa15.13■□□□□ 0.01
UBE2N-206ENST00000552442 SPDYE6P0CI01 402 aa15.13■□□□□ 0.01
UBE2N-206ENST00000552442 SPDYE2Q495Y8 402 aa15.13■□□□□ 0.01
UBE2N-206ENST00000552442 DIP2BQ9P265 1576 aa15.11■□□□□ 0.01
UBE2N-206ENST00000552442 KIF21BO75037 1637 aa15.11■□□□□ 0.01
UBE2N-206ENST00000552442 SPDYE4A6NLX3 237 aa15.11■□□□□ 0.01
UBE2N-206ENST00000552442 UHRF1BP1LA0JNW5 1464 aa15.11■□□□□ 0.01
UBE2N-206ENST00000552442 ABCC2Q92887 1545 aa15.11■□□□□ 0.01
UBE2N-206ENST00000552442 UACAQ9BZF9 1416 aa15.09■□□□□ 0.01
UBE2N-206ENST00000552442 FAM9AQ8IZU1 332 aaPredicted RBP15.09■□□□□ 0.01
UBE2N-206ENST00000552442 ABCC10Q5T3U5 1492 aa15.08■□□□□ 0.01
UBE2N-206ENST00000552442 ZCCHC11Q5TAX3 1644 aaKnown RBP15.07■□□□□ 0
UBE2N-206ENST00000552442 SAMD9Q5K651 1589 aa15.07■□□□□ 0
UBE2N-206ENST00000552442 TSPOAP1O95153 1857 aa15.06■□□□□ 0
UBE2N-206ENST00000552442 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
UBE2N-206ENST00000552442 ABCA8O94911 1581 aa15.03■□□□□ -0
UBE2N-206ENST00000552442 KDM5BQ9UGL1 1544 aa15.03■□□□□ -0
UBE2N-206ENST00000552442 PLB1Q6P1J6 1458 aa15.02■□□□□ -0
UBE2N-206ENST00000552442 FAM69CQ0P6D2 419 aa15.02■□□□□ -0
UBE2N-206ENST00000552442 ASXL2Q76L83 1435 aa15.01□□□□□ -0.01
UBE2N-206ENST00000552442 SSUH2Q9Y2M2 353 aa14.99□□□□□ -0.01
UBE2N-206ENST00000552442 GLI2P10070 1586 aa14.98□□□□□ -0.01
UBE2N-206ENST00000552442 P3H3Q8IVL6 736 aa14.97□□□□□ -0.01
UBE2N-206ENST00000552442 EFCAB5A4FU69 1503 aa14.96□□□□□ -0.02
UBE2N-206ENST00000552442 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
UBE2N-206ENST00000552442 PPRC1Q5VV67 1664 aaKnown RBP14.95□□□□□ -0.02
UBE2N-206ENST00000552442 RANGAP1P46060 587 aaPredicted RBP14.94□□□□□ -0.02
UBE2N-206ENST00000552442 EPRSP07814 1512 aaKnown RBP14.93□□□□□ -0.02
UBE2N-206ENST00000552442 MAP3K4Q9Y6R4 1608 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms