RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 TSPOAP1O95153 1857 aa23.51■■□□□ 1.35
SNRPF-204ENST00000552085 NPM1P06748 294 aaKnown RBP eCLIP23.45■■□□□ 1.34
SNRPF-204ENST00000552085 HECW2Q9P2P5 1572 aa23.44■■□□□ 1.34
SNRPF-204ENST00000552085 PRG4Q92954 1404 aaPredicted RBP23.43■■□□□ 1.34
SNRPF-204ENST00000552085 ADGRL1O94910 1474 aa23.4■■□□□ 1.34
SNRPF-204ENST00000552085 ADCY10Q96PN6 1610 aa23.37■■□□□ 1.33
SNRPF-204ENST00000552085 FHAD1B1AJZ9 1412 aa23.36■■□□□ 1.33
SNRPF-204ENST00000552085 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
SNRPF-204ENST00000552085 FBXO41Q8TF61 875 aa23.26■■□□□ 1.31
SNRPF-204ENST00000552085 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
SNRPF-204ENST00000552085 WRNQ14191 1432 aaPredicted RBP eCLIP23.21■■□□□ 1.31
SNRPF-204ENST00000552085 RUSC2Q8N2Y8 1516 aa23.21■■□□□ 1.31
SNRPF-204ENST00000552085 PPRC1Q5VV67 1664 aaKnown RBP23.19■■□□□ 1.3
SNRPF-204ENST00000552085 GLI2P10070 1586 aa23.08■■□□□ 1.29
SNRPF-204ENST00000552085 BIVM-ERCC5R4GMW8 1640 aa23.07■■□□□ 1.28
SNRPF-204ENST00000552085 COL17A1Q9UMD9 1497 aaPredicted RBP23.05■■□□□ 1.28
SNRPF-204ENST00000552085 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
SNRPF-204ENST00000552085 PLB1Q6P1J6 1458 aa22.98■■□□□ 1.27
SNRPF-204ENST00000552085 ASXL2Q76L83 1435 aa22.98■■□□□ 1.27
SNRPF-204ENST00000552085 LMTK3Q96Q04 1460 aa22.98■■□□□ 1.27
SNRPF-204ENST00000552085 ABCC2Q92887 1545 aa22.96■■□□□ 1.27
SNRPF-204ENST00000552085 CUL7Q14999 1698 aa22.94■■□□□ 1.26
SNRPF-204ENST00000552085 MAP3K4Q9Y6R4 1608 aa22.94■■□□□ 1.26
SNRPF-204ENST00000552085 KIAA0586Q9BVV6 1533 aa22.94■■□□□ 1.26
SNRPF-204ENST00000552085 TEX14Q8IWB6 1497 aa22.92■■□□□ 1.26
SNRPF-204ENST00000552085 PTPRGP23470 1445 aa22.91■■□□□ 1.26
SNRPF-204ENST00000552085 EPRSP07814 1512 aaKnown RBP22.85■■□□□ 1.25
SNRPF-204ENST00000552085 TTBK1Q5TCY1 1321 aaPredicted RBP22.83■■□□□ 1.25
SNRPF-204ENST00000552085 UHRF1BP1LA0JNW5 1464 aa22.8■■□□□ 1.24
SNRPF-204ENST00000552085 TNIKQ9UKE5 1360 aa22.8■■□□□ 1.24
SNRPF-204ENST00000552085 KIF21BO75037 1637 aa22.76■■□□□ 1.23
SNRPF-204ENST00000552085 SOCS7O14512 581 aa22.76■■□□□ 1.23
SNRPF-204ENST00000552085 CARMIL2Q6F5E8 1435 aa22.75■■□□□ 1.23
SNRPF-204ENST00000552085 UACAQ9BZF9 1416 aa22.72■■□□□ 1.23
SNRPF-204ENST00000552085 KDM5BQ9UGL1 1544 aa22.71■■□□□ 1.23
SNRPF-204ENST00000552085 ZCCHC11Q5TAX3 1644 aaKnown RBP22.71■■□□□ 1.23
SNRPF-204ENST00000552085 ILDR2Q71H61 639 aa22.7■■□□□ 1.22
SNRPF-204ENST00000552085 PTPRMP28827 1452 aa22.66■■□□□ 1.22
SNRPF-204ENST00000552085 DISP3Q9P2K9 1392 aa22.63■■□□□ 1.21
SNRPF-204ENST00000552085 ADAMTSL3P82987 1691 aa22.63■■□□□ 1.21
SNRPF-204ENST00000552085 PCF11O94913 1555 aaKnown RBP22.63■■□□□ 1.21
SNRPF-204ENST00000552085 IGF1RP08069 1367 aa22.63■■□□□ 1.21
SNRPF-204ENST00000552085 CFAP43Q8NDM7 1665 aa22.62■■□□□ 1.21
SNRPF-204ENST00000552085 MAGI3Q5TCQ9 1506 aa22.61■■□□□ 1.21
SNRPF-204ENST00000552085 IQGAP2Q13576 1575 aa22.59■■□□□ 1.21
SNRPF-204ENST00000552085 WDR7Q9Y4E6 1490 aa22.59■■□□□ 1.21
SNRPF-204ENST00000552085 CD109Q6YHK3 1445 aa22.56■■□□□ 1.2
SNRPF-204ENST00000552085 DISP1Q96F81 1524 aa22.55■■□□□ 1.2
SNRPF-204ENST00000552085 CERKQ8TCT0 537 aa22.52■■□□□ 1.2
SNRPF-204ENST00000552085 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
SNRPF-204ENST00000552085 BCORL1Q5H9F3 1711 aa22.48■■□□□ 1.19
SNRPF-204ENST00000552085 ARAP3Q8WWN8 1544 aa22.47■■□□□ 1.19
SNRPF-204ENST00000552085 MADDQ8WXG6 1647 aa22.46■■□□□ 1.19
SNRPF-204ENST00000552085 CARMIL1Q5VZK9 1371 aa22.46■■□□□ 1.19
SNRPF-204ENST00000552085 SPATA31D1Q6ZQQ2 1576 aa22.42■■□□□ 1.18
SNRPF-204ENST00000552085 KCNH8Q96L42 1107 aa22.42■■□□□ 1.18
SNRPF-204ENST00000552085 KIAA0556O60303 1618 aa22.42■■□□□ 1.18
SNRPF-204ENST00000552085 UGGT2Q9NYU1 1516 aa22.41■■□□□ 1.18
SNRPF-204ENST00000552085 RIMS1Q86UR5 1692 aaKnown RBP22.39■■□□□ 1.17
SNRPF-204ENST00000552085 HSPA2P54652 639 aa22.38■■□□□ 1.17
SNRPF-204ENST00000552085 SUPT5HO00267 1087 aaKnown RBP22.32■■□□□ 1.16
SNRPF-204ENST00000552085 ARID4BQ4LE39 1312 aaPredicted RBP22.31■■□□□ 1.16
SNRPF-204ENST00000552085 PHLDB1Q86UU1 1377 aa22.28■■□□□ 1.16
SNRPF-204ENST00000552085 ABCA8O94911 1581 aa22.27■■□□□ 1.16
SNRPF-204ENST00000552085 RAPGEF3O95398 923 aa22.26■■□□□ 1.15
SNRPF-204ENST00000552085 FRMPD1Q5SYB0 1578 aa22.23■■□□□ 1.15
SNRPF-204ENST00000552085 ABCA9Q8IUA7 1624 aa22.22■■□□□ 1.15
SNRPF-204ENST00000552085 PLPPR3Q6T4P5 718 aa22.2■■□□□ 1.14
SNRPF-204ENST00000552085 ARHGEF40Q8TER5 1519 aa22.18■■□□□ 1.14
SNRPF-204ENST00000552085 NEO1Q92859 1461 aa22.17■■□□□ 1.14
SNRPF-204ENST00000552085 RAPGEF2Q9Y4G8 1499 aa22.15■■□□□ 1.14
SNRPF-204ENST00000552085 CTTNBP2Q8WZ74 1663 aa22.13■■□□□ 1.13
SNRPF-204ENST00000552085 GOLGA3Q08378 1498 aa22.12■■□□□ 1.13
SNRPF-204ENST00000552085 STRCQ7RTU9 1775 aa22.11■■□□□ 1.13
SNRPF-204ENST00000552085 POGZQ7Z3K3 1410 aa22.11■■□□□ 1.13
SNRPF-204ENST00000552085 FER1L4A9Z1Z3 1794 aa22.1■■□□□ 1.13
SNRPF-204ENST00000552085 PREX1Q8TCU6 1659 aa22.1■■□□□ 1.13
SNRPF-204ENST00000552085 FANCAO15360 1455 aa22.09■■□□□ 1.13
SNRPF-204ENST00000552085 RICTORQ6R327 1708 aa22.09■■□□□ 1.13
SNRPF-204ENST00000552085 TTC37Q6PGP7 1564 aa22.08■■□□□ 1.12
SNRPF-204ENST00000552085 YEATS2Q9ULM3 1422 aa22.07■■□□□ 1.12
SNRPF-204ENST00000552085 SIGLEC1Q9BZZ2 1709 aa22.07■■□□□ 1.12
SNRPF-204ENST00000552085 DMRT2Q9Y5R5 561 aa22.07■■□□□ 1.12
SNRPF-204ENST00000552085 ATP10BO94823 1461 aa22.05■■□□□ 1.12
SNRPF-204ENST00000552085 ARID3CA6NKF2 412 aa22.02■■□□□ 1.12
SNRPF-204ENST00000552085 AKNAQ7Z591 1439 aa22.01■■□□□ 1.11
SNRPF-204ENST00000552085 DENND4BO75064 1496 aaPredicted RBP22.01■■□□□ 1.11
SNRPF-204ENST00000552085 FHOD3Q2V2M9 1422 aa21.97■■□□□ 1.11
SNRPF-204ENST00000552085 ZFYVE16Q7Z3T8 1539 aa21.96■■□□□ 1.11
SNRPF-204ENST00000552085 IQSEC2Q5JU85 1478 aa21.96■■□□□ 1.11
SNRPF-204ENST00000552085 EFCAB5A4FU69 1503 aa21.96■■□□□ 1.11
SNRPF-204ENST00000552085 ZMYM4Q5VZL5 1548 aa21.96■■□□□ 1.11
SNRPF-204ENST00000552085 MLECQ14165 292 aa21.95■■□□□ 1.1
SNRPF-204ENST00000552085 PTPRTO14522 1441 aa21.93■■□□□ 1.1
SNRPF-204ENST00000552085 LTBP4Q8N2S1 1624 aa21.93■■□□□ 1.1
SNRPF-204ENST00000552085 CFAP74Q9C0B2 1584 aa21.93■■□□□ 1.1
SNRPF-204ENST00000552085 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
SNRPF-204ENST00000552085 SETD1BQ9UPS6 1966 aaKnown RBP21.9■■□□□ 1.1
SNRPF-204ENST00000552085 ARHGEF12Q9NZN5 1544 aa21.9■■□□□ 1.1
SNRPF-204ENST00000552085 MAGI2Q86UL8 1455 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms