RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 GRIN2BQ13224 1484 aa12.39□□□□□ -0.43
PRPF40B-214ENST00000551320 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
PRPF40B-214ENST00000551320 ERCC6L2Q5T890 1561 aa12.35□□□□□ -0.43
PRPF40B-214ENST00000551320 SYNJ2O15056 1496 aa12.35□□□□□ -0.43
PRPF40B-214ENST00000551320 MAGI1Q96QZ7 1491 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-214ENST00000551320 WDR97A6NE52 1622 aa12.35□□□□□ -0.43
PRPF40B-214ENST00000551320 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
PRPF40B-214ENST00000551320 SYNJ1O43426 1573 aa12.34□□□□□ -0.43
PRPF40B-214ENST00000551320 DCAF8L1A6NGE4 600 aa12.31□□□□□ -0.44
PRPF40B-214ENST00000551320 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
PRPF40B-214ENST00000551320 ABCA10Q8WWZ4 1543 aa12.3□□□□□ -0.44
PRPF40B-214ENST00000551320 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
PRPF40B-214ENST00000551320 CEP170Q5SW79 1584 aa12.26□□□□□ -0.45
PRPF40B-214ENST00000551320 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
PRPF40B-214ENST00000551320 WRNQ14191 1432 aaPredicted RBP eCLIP12.25□□□□□ -0.45
PRPF40B-214ENST00000551320 GRIN2AQ12879 1464 aa12.25□□□□□ -0.45
PRPF40B-214ENST00000551320 ADAMTS12P58397 1594 aa12.22□□□□□ -0.45
PRPF40B-214ENST00000551320 TOP2BQ02880 1626 aa12.2□□□□□ -0.46
PRPF40B-214ENST00000551320 NUP160Q12769 1436 aa12.19□□□□□ -0.46
PRPF40B-214ENST00000551320 BIVM-ERCC5R4GMW8 1640 aa12.19□□□□□ -0.46
PRPF40B-214ENST00000551320 TTBK1Q5TCY1 1321 aaPredicted RBP12.17□□□□□ -0.46
PRPF40B-214ENST00000551320 FHAD1B1AJZ9 1412 aa12.17□□□□□ -0.46
PRPF40B-214ENST00000551320 PRG4Q92954 1404 aaPredicted RBP12.16□□□□□ -0.46
PRPF40B-214ENST00000551320 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
PRPF40B-214ENST00000551320 SHROOM2Q13796 1616 aa12.11□□□□□ -0.47
PRPF40B-214ENST00000551320 ERICH3Q5RHP9 1530 aa12.1□□□□□ -0.47
PRPF40B-214ENST00000551320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.08□□□□□ -0.48
PRPF40B-214ENST00000551320 FAM69CQ0P6D2 419 aa12.07□□□□□ -0.48
PRPF40B-214ENST00000551320 POTEDQ86YR6 584 aa12.06□□□□□ -0.48
PRPF40B-214ENST00000551320 IGF1RP08069 1367 aa12.05□□□□□ -0.48
PRPF40B-214ENST00000551320 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
PRPF40B-214ENST00000551320 RUSC2Q8N2Y8 1516 aa12.05□□□□□ -0.48
PRPF40B-214ENST00000551320 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
PRPF40B-214ENST00000551320 ADCY10Q96PN6 1610 aa12.01□□□□□ -0.49
PRPF40B-214ENST00000551320 NPM1P06748 294 aaKnown RBP eCLIP12□□□□□ -0.49
PRPF40B-214ENST00000551320 KIF27Q86VH2 1401 aa11.97□□□□□ -0.49
PRPF40B-214ENST00000551320 TSPOAP1O95153 1857 aa11.97□□□□□ -0.49
PRPF40B-214ENST00000551320 KIAA0586Q9BVV6 1533 aa11.96□□□□□ -0.5
PRPF40B-214ENST00000551320 ABCC10Q5T3U5 1492 aa11.95□□□□□ -0.5
PRPF40B-214ENST00000551320 CARMIL1Q5VZK9 1371 aa11.95□□□□□ -0.5
PRPF40B-214ENST00000551320 PTPRGP23470 1445 aa11.94□□□□□ -0.5
PRPF40B-214ENST00000551320 DIP2BQ9P265 1576 aa11.93□□□□□ -0.5
PRPF40B-214ENST00000551320 KDM4FA0A1W2PPD8 638 aa11.91□□□□□ -0.5
PRPF40B-214ENST00000551320 U3KPZ7 1027 aaPredicted RBP11.91□□□□□ -0.5
PRPF40B-214ENST00000551320 CUL7Q14999 1698 aa11.9□□□□□ -0.5
PRPF40B-214ENST00000551320 MAPKBP1O60336 1514 aa11.9□□□□□ -0.5
PRPF40B-214ENST00000551320 KDM6BO15054 1643 aa11.86□□□□□ -0.51
PRPF40B-214ENST00000551320 ARID3CA6NKF2 412 aa11.86□□□□□ -0.51
PRPF40B-214ENST00000551320 TNIKQ9UKE5 1360 aa11.86□□□□□ -0.51
PRPF40B-214ENST00000551320 ASXL2Q76L83 1435 aa11.86□□□□□ -0.51
PRPF40B-214ENST00000551320 DISP1Q96F81 1524 aa11.85□□□□□ -0.51
PRPF40B-214ENST00000551320 IQGAP2Q13576 1575 aa11.84□□□□□ -0.51
PRPF40B-214ENST00000551320 ABCC2Q92887 1545 aa11.83□□□□□ -0.52
PRPF40B-214ENST00000551320 ATXN8OSP0DMR3 200 aa11.83□□□□□ -0.52
PRPF40B-214ENST00000551320 CARMIL2Q6F5E8 1435 aa11.83□□□□□ -0.52
PRPF40B-214ENST00000551320 COL17A1Q9UMD9 1497 aaPredicted RBP11.82□□□□□ -0.52
PRPF40B-214ENST00000551320 P3H3Q8IVL6 736 aa11.81□□□□□ -0.52
PRPF40B-214ENST00000551320 PPRC1Q5VV67 1664 aaKnown RBP11.81□□□□□ -0.52
PRPF40B-214ENST00000551320 UACAQ9BZF9 1416 aa11.8□□□□□ -0.52
PRPF40B-214ENST00000551320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
PRPF40B-214ENST00000551320 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
PRPF40B-214ENST00000551320 RAPGEF2Q9Y4G8 1499 aa11.79□□□□□ -0.52
PRPF40B-214ENST00000551320 KCNH8Q96L42 1107 aa11.79□□□□□ -0.52
PRPF40B-214ENST00000551320 SAMD1Q6SPF0 538 aaPredicted RBP11.78□□□□□ -0.52
PRPF40B-214ENST00000551320 PLB1Q6P1J6 1458 aa11.77□□□□□ -0.52
PRPF40B-214ENST00000551320 RANGAP1P46060 587 aaPredicted RBP11.77□□□□□ -0.53
PRPF40B-214ENST00000551320 EPRSP07814 1512 aaKnown RBP11.76□□□□□ -0.53
PRPF40B-214ENST00000551320 KIAA0556O60303 1618 aa11.75□□□□□ -0.53
PRPF40B-214ENST00000551320 ZCCHC11Q5TAX3 1644 aaKnown RBP11.75□□□□□ -0.53
PRPF40B-214ENST00000551320 UHRF1BP1LA0JNW5 1464 aa11.75□□□□□ -0.53
PRPF40B-214ENST00000551320 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
PRPF40B-214ENST00000551320 KDM5BQ9UGL1 1544 aa11.73□□□□□ -0.53
PRPF40B-214ENST00000551320 ADGRL1O94910 1474 aa11.72□□□□□ -0.53
PRPF40B-214ENST00000551320 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
PRPF40B-214ENST00000551320 GLI2P10070 1586 aa11.71□□□□□ -0.53
PRPF40B-214ENST00000551320 RNF39Q9H2S5 420 aa11.71□□□□□ -0.53
PRPF40B-214ENST00000551320 FAM9AQ8IZU1 332 aaPredicted RBP11.7□□□□□ -0.54
PRPF40B-214ENST00000551320 MAP3K4Q9Y6R4 1608 aa11.7□□□□□ -0.54
PRPF40B-214ENST00000551320 WDR7Q9Y4E6 1490 aa11.68□□□□□ -0.54
PRPF40B-214ENST00000551320 ILDR1Q86SU0 546 aaPredicted RBP11.67□□□□□ -0.54
PRPF40B-214ENST00000551320 CTTNBP2Q8WZ74 1663 aa11.67□□□□□ -0.54
PRPF40B-214ENST00000551320 PRXQ9BXM0 1461 aa11.65□□□□□ -0.54
PRPF40B-214ENST00000551320 CD109Q6YHK3 1445 aa11.65□□□□□ -0.54
PRPF40B-214ENST00000551320 ABCA8O94911 1581 aa11.65□□□□□ -0.54
PRPF40B-214ENST00000551320 APLP2Q06481 763 aa11.62□□□□□ -0.55
PRPF40B-214ENST00000551320 TEX14Q8IWB6 1497 aa11.62□□□□□ -0.55
PRPF40B-214ENST00000551320 ATP10BO94823 1461 aa11.61□□□□□ -0.55
PRPF40B-214ENST00000551320 GOLGA3Q08378 1498 aa11.6□□□□□ -0.55
PRPF40B-214ENST00000551320 RAPGEF3O95398 923 aa11.6□□□□□ -0.55
PRPF40B-214ENST00000551320 HECW2Q9P2P5 1572 aa11.59□□□□□ -0.55
PRPF40B-214ENST00000551320 KIF21BO75037 1637 aa11.58□□□□□ -0.56
PRPF40B-214ENST00000551320 FHOD3Q2V2M9 1422 aa11.57□□□□□ -0.56
PRPF40B-214ENST00000551320 MAGI3Q5TCQ9 1506 aa11.56□□□□□ -0.56
PRPF40B-214ENST00000551320 C1QBPQ07021 282 aaKnown RBP11.56□□□□□ -0.56
PRPF40B-214ENST00000551320 CFAP43Q8NDM7 1665 aa11.55□□□□□ -0.56
PRPF40B-214ENST00000551320 SPINK5Q9NQ38 1064 aaPredicted RBP11.53□□□□□ -0.56
PRPF40B-214ENST00000551320 NUP153P49790 1475 aaKnown RBP11.51□□□□□ -0.57
PRPF40B-214ENST00000551320 RAPGEF6Q8TEU7 1601 aa11.51□□□□□ -0.57
PRPF40B-214ENST00000551320 ATP1B4Q9UN42 357 aaPredicted RBP11.51□□□□□ -0.57
PRPF40B-214ENST00000551320 ARID4BQ4LE39 1312 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms