RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 IGF1RP08069 1367 aa40.21■■■■■ 4.03
SMARCD1-209ENST00000550477 RUSC2Q8N2Y8 1516 aa40.2■■■■■ 4.03
SMARCD1-209ENST00000550477 AEBP2Q6ZN18 517 aaPredicted RBP40.19■■■■■ 4.02
SMARCD1-209ENST00000550477 CUL7Q14999 1698 aa40.14■■■■■ 4.02
SMARCD1-209ENST00000550477 KIAA0586Q9BVV6 1533 aa40.12■■■■■ 4.01
SMARCD1-209ENST00000550477 CARMIL1Q5VZK9 1371 aa39.99■■■■□ 3.99
SMARCD1-209ENST00000550477 KIF13AQ9H1H9 1805 aa39.97■■■■□ 3.99
SMARCD1-209ENST00000550477 FAM69CQ0P6D2 419 aa39.96■■■■□ 3.99
SMARCD1-209ENST00000550477 ABCC10Q5T3U5 1492 aa39.89■■■■□ 3.98
SMARCD1-209ENST00000550477 MAPKBP1O60336 1514 aa39.89■■■■□ 3.98
SMARCD1-209ENST00000550477 ADCY10Q96PN6 1610 aa39.84■■■■□ 3.97
SMARCD1-209ENST00000550477 CARMIL2Q6F5E8 1435 aa39.84■■■■□ 3.97
SMARCD1-209ENST00000550477 PTPRGP23470 1445 aa39.82■■■■□ 3.97
SMARCD1-209ENST00000550477 TTBK1Q5TCY1 1321 aaPredicted RBP39.75■■■■□ 3.95
SMARCD1-209ENST00000550477 TNIKQ9UKE5 1360 aa39.74■■■■□ 3.95
SMARCD1-209ENST00000550477 DIP2BQ9P265 1576 aa39.72■■■■□ 3.95
SMARCD1-209ENST00000550477 IQGAP2Q13576 1575 aa39.68■■■■□ 3.94
SMARCD1-209ENST00000550477 RAPGEF2Q9Y4G8 1499 aa39.6■■■■□ 3.93
SMARCD1-209ENST00000550477 ABCC2Q92887 1545 aa39.55■■■■□ 3.92
SMARCD1-209ENST00000550477 TSPOAP1O95153 1857 aa39.5■■■■□ 3.91
SMARCD1-209ENST00000550477 UACAQ9BZF9 1416 aa39.49■■■■□ 3.91
SMARCD1-209ENST00000550477 PLB1Q6P1J6 1458 aa39.48■■■■□ 3.91
SMARCD1-209ENST00000550477 UHRF1BP1LA0JNW5 1464 aa39.47■■■■□ 3.91
SMARCD1-209ENST00000550477 KDM6BO15054 1643 aa39.47■■■■□ 3.91
SMARCD1-209ENST00000550477 DISP1Q96F81 1524 aa39.45■■■■□ 3.91
SMARCD1-209ENST00000550477 ASXL2Q76L83 1435 aa39.43■■■■□ 3.9
SMARCD1-209ENST00000550477 UGGT2Q9NYU1 1516 aa39.41■■■■□ 3.9
SMARCD1-209ENST00000550477 GLI2P10070 1586 aa39.31■■■■□ 3.88
SMARCD1-209ENST00000550477 KIAA0556O60303 1618 aa39.29■■■■□ 3.88
SMARCD1-209ENST00000550477 KDM5BQ9UGL1 1544 aa39.27■■■■□ 3.88
SMARCD1-209ENST00000550477 GOLGA3Q08378 1498 aa39.23■■■■□ 3.87
SMARCD1-209ENST00000550477 FAM9AQ8IZU1 332 aaPredicted RBP39.21■■■■□ 3.87
SMARCD1-209ENST00000550477 CTTNBP2Q8WZ74 1663 aa39.2■■■■□ 3.87
SMARCD1-209ENST00000550477 EPRSP07814 1512 aaKnown RBP39.17■■■■□ 3.86
SMARCD1-209ENST00000550477 ZCCHC11Q5TAX3 1644 aaKnown RBP39.15■■■■□ 3.86
SMARCD1-209ENST00000550477 TEX14Q8IWB6 1497 aa39.11■■■■□ 3.85
SMARCD1-209ENST00000550477 KDM4FA0A1W2PPD8 638 aa39.09■■■■□ 3.85
SMARCD1-209ENST00000550477 PRXQ9BXM0 1461 aa39.09■■■■□ 3.85
SMARCD1-209ENST00000550477 PPRC1Q5VV67 1664 aaKnown RBP39.09■■■■□ 3.85
SMARCD1-209ENST00000550477 MAP3K4Q9Y6R4 1608 aa39.04■■■■□ 3.84
SMARCD1-209ENST00000550477 WDR7Q9Y4E6 1490 aa39.04■■■■□ 3.84
SMARCD1-209ENST00000550477 KCNH8Q96L42 1107 aa38.95■■■■□ 3.83
SMARCD1-209ENST00000550477 ABCA8O94911 1581 aa38.93■■■■□ 3.82
SMARCD1-209ENST00000550477 CSRNP3Q8WYN3 585 aa38.91■■■■□ 3.82
SMARCD1-209ENST00000550477 COL17A1Q9UMD9 1497 aaPredicted RBP38.87■■■■□ 3.81
SMARCD1-209ENST00000550477 CD109Q6YHK3 1445 aa38.87■■■■□ 3.81
SMARCD1-209ENST00000550477 P3H3Q8IVL6 736 aa38.83■■■■□ 3.81
SMARCD1-209ENST00000550477 CFAP43Q8NDM7 1665 aa38.81■■■■□ 3.8
SMARCD1-209ENST00000550477 MAGI3Q5TCQ9 1506 aa38.79■■■■□ 3.8
SMARCD1-209ENST00000550477 ADGRL1O94910 1474 aa38.75■■■■□ 3.79
SMARCD1-209ENST00000550477 EEA1Q15075 1411 aa38.72■■■■□ 3.79
SMARCD1-209ENST00000550477 ARID3CA6NKF2 412 aa38.7■■■■□ 3.79
SMARCD1-209ENST00000550477 ATP10BO94823 1461 aa38.66■■■■□ 3.78
SMARCD1-209ENST00000550477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.64■■■■□ 3.78
SMARCD1-209ENST00000550477 HNRNPUL2Q1KMD3 747 aaKnown RBP38.64■■■■□ 3.78
SMARCD1-209ENST00000550477 SAMD9Q5K651 1589 aa38.6■■■■□ 3.77
SMARCD1-209ENST00000550477 RANGAP1P46060 587 aaPredicted RBP38.56■■■■□ 3.76
SMARCD1-209ENST00000550477 PHLDB1Q86UU1 1377 aa38.56■■■■□ 3.76
SMARCD1-209ENST00000550477 RAPGEF6Q8TEU7 1601 aa38.54■■■■□ 3.76
SMARCD1-209ENST00000550477 ARAP3Q8WWN8 1544 aa38.48■■■■□ 3.75
SMARCD1-209ENST00000550477 ABCA9Q8IUA7 1624 aa38.45■■■■□ 3.75
SMARCD1-209ENST00000550477 PLEKHD1A6NEE1 506 aa38.41■■■■□ 3.74
SMARCD1-209ENST00000550477 FHOD3Q2V2M9 1422 aa38.38■■■■□ 3.74
SMARCD1-209ENST00000550477 NUP153P49790 1475 aaKnown RBP38.35■■■■□ 3.73
SMARCD1-209ENST00000550477 NEO1Q92859 1461 aa38.35■■■■□ 3.73
SMARCD1-209ENST00000550477 EFCAB5A4FU69 1503 aa38.3■■■■□ 3.72
SMARCD1-209ENST00000550477 KIF21BO75037 1637 aa38.3■■■■□ 3.72
SMARCD1-209ENST00000550477 RAPGEF3O95398 923 aa38.28■■■■□ 3.72
SMARCD1-209ENST00000550477 HECW2Q9P2P5 1572 aa38.23■■■■□ 3.71
SMARCD1-209ENST00000550477 UBTFP17480 764 aaKnown RBP38.22■■■■□ 3.71
SMARCD1-209ENST00000550477 ARID4BQ4LE39 1312 aaPredicted RBP38.14■■■■□ 3.7
SMARCD1-209ENST00000550477 DENND4BO75064 1496 aaPredicted RBP38.09■■■■□ 3.69
SMARCD1-209ENST00000550477 EHMT2Q96KQ7 1210 aa38.09■■■■□ 3.69
SMARCD1-209ENST00000550477 AKNAQ7Z591 1439 aa38.08■■■■□ 3.69
SMARCD1-209ENST00000550477 ATP1B4Q9UN42 357 aaPredicted RBP38.08■■■■□ 3.69
SMARCD1-209ENST00000550477 CFAP74Q9C0B2 1584 aa38.07■■■■□ 3.69
SMARCD1-209ENST00000550477 FANCAO15360 1455 aa38.07■■■■□ 3.68
SMARCD1-209ENST00000550477 FMN1Q68DA7 1419 aa38.04■■■■□ 3.68
SMARCD1-209ENST00000550477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.04■■■■□ 3.68
SMARCD1-209ENST00000550477 ILDR1Q86SU0 546 aaPredicted RBP38.04■■■■□ 3.68
SMARCD1-209ENST00000550477 CDK11AQ9UQ88 783 aaPredicted RBP38.04■■■■□ 3.68
SMARCD1-209ENST00000550477 CHIC1Q5VXU3 224 aa38.02■■■■□ 3.68
SMARCD1-209ENST00000550477 FRMPD1Q5SYB0 1578 aa38■■■■□ 3.67
SMARCD1-209ENST00000550477 ADAMTSL3P82987 1691 aa37.99■■■■□ 3.67
SMARCD1-209ENST00000550477 PTPRMP28827 1452 aa37.99■■■■□ 3.67
SMARCD1-209ENST00000550477 CDK13Q14004 1512 aaKnown RBP37.96■■■■□ 3.67
SMARCD1-209ENST00000550477 BCORL1Q5H9F3 1711 aa37.93■■■■□ 3.66
SMARCD1-209ENST00000550477 TTC37Q6PGP7 1564 aa37.93■■■■□ 3.66
SMARCD1-209ENST00000550477 RICTORQ6R327 1708 aa37.92■■■■□ 3.66
SMARCD1-209ENST00000550477 HECW1Q76N89 1606 aa37.91■■■■□ 3.66
SMARCD1-209ENST00000550477 ARHGEF40Q8TER5 1519 aa37.9■■■■□ 3.66
SMARCD1-209ENST00000550477 POGZQ7Z3K3 1410 aa37.89■■■■□ 3.66
SMARCD1-209ENST00000550477 PLCH2O75038 1416 aa37.88■■■■□ 3.66
SMARCD1-209ENST00000550477 ARHGAP35Q9NRY4 1499 aa37.87■■■■□ 3.65
SMARCD1-209ENST00000550477 MAGI2Q86UL8 1455 aa37.85■■■■□ 3.65
SMARCD1-209ENST00000550477 EFCAB2Q5VUJ9 269 aa37.85■■■■□ 3.65
SMARCD1-209ENST00000550477 SCAPERQ9BY12 1400 aa37.82■■■■□ 3.64
SMARCD1-209ENST00000550477 ZMYM4Q5VZL5 1548 aa37.82■■■■□ 3.64
SMARCD1-209ENST00000550477 MADDQ8WXG6 1647 aa37.81■■■■□ 3.64
SMARCD1-209ENST00000550477 ZFYVE16Q7Z3T8 1539 aa37.81■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms