RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CTTNBP2Q8WZ74 1663 aa21.53■■□□□ 1.04
RAB5C-206ENST00000550406 SHROOM2Q13796 1616 aa21.51■■□□□ 1.03
RAB5C-206ENST00000550406 EHMT2Q96KQ7 1210 aa21.48■■□□□ 1.03
RAB5C-206ENST00000550406 IQGAP2Q13576 1575 aa21.47■■□□□ 1.03
RAB5C-206ENST00000550406 GOLGA3Q08378 1498 aa21.46■■□□□ 1.03
RAB5C-206ENST00000550406 JPH4Q96JJ6 628 aa21.46■■□□□ 1.03
RAB5C-206ENST00000550406 ERCC6L2Q5T890 1561 aa21.44■■□□□ 1.02
RAB5C-206ENST00000550406 RIMBP3CA6NJZ7 1639 aa21.43■■□□□ 1.02
RAB5C-206ENST00000550406 RIMBP3BA6NNM3 1639 aa21.43■■□□□ 1.02
RAB5C-206ENST00000550406 RIMBP3Q9UFD9 1639 aa21.43■■□□□ 1.02
RAB5C-206ENST00000550406 ARHGEF11O15085 1522 aa21.42■■□□□ 1.02
RAB5C-206ENST00000550406 PRG4Q92954 1404 aaPredicted RBP21.38■■□□□ 1.01
RAB5C-206ENST00000550406 UGGT2Q9NYU1 1516 aa21.38■■□□□ 1.01
RAB5C-206ENST00000550406 UBTFP17480 764 aaKnown RBP21.37■■□□□ 1.01
RAB5C-206ENST00000550406 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
RAB5C-206ENST00000550406 DISP1Q96F81 1524 aa21.33■■□□□ 1
RAB5C-206ENST00000550406 ARAP1Q96P48 1450 aa21.29■■□□□ 1
RAB5C-206ENST00000550406 TNIKQ9UKE5 1360 aa21.27■■□□□ 1
RAB5C-206ENST00000550406 KIAA0556O60303 1618 aa21.27■■□□□ 1
RAB5C-206ENST00000550406 SAMD9Q5K651 1589 aa21.26■□□□□ 0.99
RAB5C-206ENST00000550406 CARMIL2Q6F5E8 1435 aa21.24■□□□□ 0.99
RAB5C-206ENST00000550406 RANGAP1P46060 587 aaPredicted RBP21.24■□□□□ 0.99
RAB5C-206ENST00000550406 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
RAB5C-206ENST00000550406 P3H3Q8IVL6 736 aa21.19■□□□□ 0.98
RAB5C-206ENST00000550406 EFCAB5A4FU69 1503 aa21.16■□□□□ 0.98
RAB5C-206ENST00000550406 ARHGAP35Q9NRY4 1499 aa21.16■□□□□ 0.98
RAB5C-206ENST00000550406 PTPRGP23470 1445 aa21.14■□□□□ 0.98
RAB5C-206ENST00000550406 FHOD3Q2V2M9 1422 aa21.12■□□□□ 0.97
RAB5C-206ENST00000550406 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
RAB5C-206ENST00000550406 CLIP1P30622 1438 aa21.09■□□□□ 0.97
RAB5C-206ENST00000550406 CEP162Q5TB80 1403 aa21.08■□□□□ 0.97
RAB5C-206ENST00000550406 ADCY10Q96PN6 1610 aa21.06■□□□□ 0.96
RAB5C-206ENST00000550406 PLB1Q6P1J6 1458 aa21.04■□□□□ 0.96
RAB5C-206ENST00000550406 ABCA8O94911 1581 aa21.04■□□□□ 0.96
RAB5C-206ENST00000550406 UACAQ9BZF9 1416 aa21.03■□□□□ 0.96
RAB5C-206ENST00000550406 UHRF1BP1LA0JNW5 1464 aa21.01■□□□□ 0.95
RAB5C-206ENST00000550406 ABCC2Q92887 1545 aa20.99■□□□□ 0.95
RAB5C-206ENST00000550406 RAPGEF6Q8TEU7 1601 aa20.98■□□□□ 0.95
RAB5C-206ENST00000550406 FMN1Q68DA7 1419 aa20.94■□□□□ 0.94
RAB5C-206ENST00000550406 KDM5BQ9UGL1 1544 aa20.91■□□□□ 0.94
RAB5C-206ENST00000550406 LRRIQ1Q96JM4 1722 aa20.9■□□□□ 0.94
RAB5C-206ENST00000550406 ZCCHC11Q5TAX3 1644 aaKnown RBP20.9■□□□□ 0.94
RAB5C-206ENST00000550406 NUP153P49790 1475 aaKnown RBP20.9■□□□□ 0.94
RAB5C-206ENST00000550406 PCF11O94913 1555 aaKnown RBP20.89■□□□□ 0.93
RAB5C-206ENST00000550406 ATP10BO94823 1461 aa20.87■□□□□ 0.93
RAB5C-206ENST00000550406 CASKIN1Q8WXD9 1431 aa20.86■□□□□ 0.93
RAB5C-206ENST00000550406 ARID3CA6NKF2 412 aa20.84■□□□□ 0.93
RAB5C-206ENST00000550406 NPM1P06748 294 aaKnown RBP eCLIP20.84■□□□□ 0.93
RAB5C-206ENST00000550406 HECW1Q76N89 1606 aa20.84■□□□□ 0.93
RAB5C-206ENST00000550406 MAPKBP1O60336 1514 aa20.81■□□□□ 0.92
RAB5C-206ENST00000550406 VPS8Q8N3P4 1428 aa20.8■□□□□ 0.92
RAB5C-206ENST00000550406 EPRSP07814 1512 aaKnown RBP20.8■□□□□ 0.92
RAB5C-206ENST00000550406 ATP1B4Q9UN42 357 aaPredicted RBP20.8■□□□□ 0.92
RAB5C-206ENST00000550406 FYCO1Q9BQS8 1478 aa20.8■□□□□ 0.92
RAB5C-206ENST00000550406 CDK13Q14004 1512 aaKnown RBP20.79■□□□□ 0.92
RAB5C-206ENST00000550406 ASXL2Q76L83 1435 aa20.77■□□□□ 0.91
RAB5C-206ENST00000550406 KIF13AQ9H1H9 1805 aa20.73■□□□□ 0.91
RAB5C-206ENST00000550406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
RAB5C-206ENST00000550406 HNRNPUL2Q1KMD3 747 aaKnown RBP20.71■□□□□ 0.91
RAB5C-206ENST00000550406 WDR7Q9Y4E6 1490 aa20.7■□□□□ 0.9
RAB5C-206ENST00000550406 CCDC18Q5T9S5 1454 aa20.69■□□□□ 0.9
RAB5C-206ENST00000550406 ABCC10Q5T3U5 1492 aa20.69■□□□□ 0.9
RAB5C-206ENST00000550406 DIP2BQ9P265 1576 aa20.68■□□□□ 0.9
RAB5C-206ENST00000550406 MAGI3Q5TCQ9 1506 aa20.68■□□□□ 0.9
RAB5C-206ENST00000550406 CFAP43Q8NDM7 1665 aa20.66■□□□□ 0.9
RAB5C-206ENST00000550406 PLEKHD1A6NEE1 506 aa20.65■□□□□ 0.9
RAB5C-206ENST00000550406 KCNH8Q96L42 1107 aa20.63■□□□□ 0.89
RAB5C-206ENST00000550406 GLI2P10070 1586 aa20.63■□□□□ 0.89
RAB5C-206ENST00000550406 TIAM1Q13009 1591 aa20.63■□□□□ 0.89
RAB5C-206ENST00000550406 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
RAB5C-206ENST00000550406 FAM69CQ0P6D2 419 aa20.61■□□□□ 0.89
RAB5C-206ENST00000550406 TROQ12816 1431 aaPredicted RBP20.6■□□□□ 0.89
RAB5C-206ENST00000550406 MAP3K1Q13233 1512 aa20.59■□□□□ 0.89
RAB5C-206ENST00000550406 CDK11AQ9UQ88 783 aaPredicted RBP20.59■□□□□ 0.89
RAB5C-206ENST00000550406 KIF14Q15058 1648 aa20.59■□□□□ 0.89
RAB5C-206ENST00000550406 ABCA9Q8IUA7 1624 aa20.56■□□□□ 0.88
RAB5C-206ENST00000550406 MAP3K4Q9Y6R4 1608 aa20.56■□□□□ 0.88
RAB5C-206ENST00000550406 TSPOAP1O95153 1857 aa20.56■□□□□ 0.88
RAB5C-206ENST00000550406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.55■□□□□ 0.88
RAB5C-206ENST00000550406 KANK4Q5T7N3 995 aaPredicted RBP20.55■□□□□ 0.88
RAB5C-206ENST00000550406 PPRC1Q5VV67 1664 aaKnown RBP20.54■□□□□ 0.88
RAB5C-206ENST00000550406 LRRC9Q6ZRR7 1453 aa20.53■□□□□ 0.88
RAB5C-206ENST00000550406 TTC37Q6PGP7 1564 aa20.53■□□□□ 0.88
RAB5C-206ENST00000550406 EHBP1L1Q8N3D4 1523 aa20.51■□□□□ 0.87
RAB5C-206ENST00000550406 MTUS2Q5JR59 1369 aa20.5■□□□□ 0.87
RAB5C-206ENST00000550406 CD109Q6YHK3 1445 aa20.48■□□□□ 0.87
RAB5C-206ENST00000550406 APLP2Q06481 763 aa20.48■□□□□ 0.87
RAB5C-206ENST00000550406 CDC42BPAQ5VT25 1732 aa20.46■□□□□ 0.87
RAB5C-206ENST00000550406 SUPT6HQ7KZ85 1726 aaKnown RBP20.45■□□□□ 0.86
RAB5C-206ENST00000550406 MYO5CQ9NQX4 1742 aa20.45■□□□□ 0.86
RAB5C-206ENST00000550406 CDC42BPBQ9Y5S2 1711 aa20.44■□□□□ 0.86
RAB5C-206ENST00000550406 NCOA2Q15596 1464 aa20.42■□□□□ 0.86
RAB5C-206ENST00000550406 PLCH2O75038 1416 aa20.41■□□□□ 0.86
RAB5C-206ENST00000550406 PREX2Q70Z35 1606 aa20.39■□□□□ 0.86
RAB5C-206ENST00000550406 GPATCH8Q9UKJ3 1502 aaKnown RBP20.39■□□□□ 0.85
RAB5C-206ENST00000550406 PPARGC1BQ86YN6 1023 aaKnown RBP20.38■□□□□ 0.85
RAB5C-206ENST00000550406 ARAP3Q8WWN8 1544 aa20.37■□□□□ 0.85
RAB5C-206ENST00000550406 TEX14Q8IWB6 1497 aa20.35■□□□□ 0.85
RAB5C-206ENST00000550406 CCNB3Q8WWL7 1395 aa20.34■□□□□ 0.85
RAB5C-206ENST00000550406 ITSN2Q9NZM3 1697 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms