RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 LRRC9Q6ZRR7 1453 aa18.28■□□□□ 0.52
CALCOCO1-217ENST00000549935 MAPKBP1O60336 1514 aa18.27■□□□□ 0.52
CALCOCO1-217ENST00000549935 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.52
CALCOCO1-217ENST00000549935 FANCD2Q9BXW9 1451 aa18.27■□□□□ 0.51
CALCOCO1-217ENST00000549935 P3H3Q8IVL6 736 aa18.25■□□□□ 0.51
CALCOCO1-217ENST00000549935 PHLDB1Q86UU1 1377 aa18.24■□□□□ 0.51
CALCOCO1-217ENST00000549935 FHAD1B1AJZ9 1412 aa18.24■□□□□ 0.51
CALCOCO1-217ENST00000549935 PCF11O94913 1555 aaKnown RBP18.22■□□□□ 0.51
CALCOCO1-217ENST00000549935 ATP1B4Q9UN42 357 aaPredicted RBP18.22■□□□□ 0.51
CALCOCO1-217ENST00000549935 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
CALCOCO1-217ENST00000549935 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
CALCOCO1-217ENST00000549935 FAM50AQ14320 339 aaKnown RBP18.2■□□□□ 0.5
CALCOCO1-217ENST00000549935 CFAP43Q8NDM7 1665 aa18.2■□□□□ 0.5
CALCOCO1-217ENST00000549935 SETD5Q9C0A6 1442 aa18.2■□□□□ 0.5
CALCOCO1-217ENST00000549935 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
CALCOCO1-217ENST00000549935 FHOD3Q2V2M9 1422 aa18.18■□□□□ 0.5
CALCOCO1-217ENST00000549935 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
CALCOCO1-217ENST00000549935 POLA1P09884 1462 aaPredicted RBP18.16■□□□□ 0.5
CALCOCO1-217ENST00000549935 KCNH8Q96L42 1107 aa18.15■□□□□ 0.5
CALCOCO1-217ENST00000549935 TOPBP1Q92547 1522 aa18.15■□□□□ 0.5
CALCOCO1-217ENST00000549935 CCER2I3L3R5 266 aa18.13■□□□□ 0.49
CALCOCO1-217ENST00000549935 PPP1R15AO75807 674 aaPredicted RBP18.13■□□□□ 0.49
CALCOCO1-217ENST00000549935 NESP48681 1621 aa18.12■□□□□ 0.49
CALCOCO1-217ENST00000549935 FYCO1Q9BQS8 1478 aa18.12■□□□□ 0.49
CALCOCO1-217ENST00000549935 WDR97A6NE52 1622 aa18.11■□□□□ 0.49
CALCOCO1-217ENST00000549935 EFCAB5A4FU69 1503 aa18.1■□□□□ 0.49
CALCOCO1-217ENST00000549935 CUL7Q14999 1698 aa18.09■□□□□ 0.49
CALCOCO1-217ENST00000549935 SIN3AQ96ST3 1273 aa18.09■□□□□ 0.49
CALCOCO1-217ENST00000549935 CASKIN1Q8WXD9 1431 aa18.08■□□□□ 0.48
CALCOCO1-217ENST00000549935 FKBP8Q14318 412 aa18.08■□□□□ 0.48
CALCOCO1-217ENST00000549935 CTTNBP2Q8WZ74 1663 aa18.08■□□□□ 0.48
CALCOCO1-217ENST00000549935 AQRO60306 1485 aaKnown RBP eCLIP18.05■□□□□ 0.481e-6■■■■■ 33.7
CALCOCO1-217ENST00000549935 DDX10Q13206 875 aaKnown RBP18.05■□□□□ 0.48
CALCOCO1-217ENST00000549935 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.04■□□□□ 0.48
CALCOCO1-217ENST00000549935 NEFLP07196 543 aa18.02■□□□□ 0.48
CALCOCO1-217ENST00000549935 FMN1Q68DA7 1419 aa18.02■□□□□ 0.47
CALCOCO1-217ENST00000549935 RBM19Q9Y4C8 960 aaKnown RBP17.99■□□□□ 0.47
CALCOCO1-217ENST00000549935 URB2Q14146 1524 aaKnown RBP17.99■□□□□ 0.47
CALCOCO1-217ENST00000549935 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
CALCOCO1-217ENST00000549935 FGD6Q6ZV73 1430 aa17.98■□□□□ 0.47
CALCOCO1-217ENST00000549935 BCANQ96GW7 911 aa17.98■□□□□ 0.47
CALCOCO1-217ENST00000549935 TDRD9Q8NDG6 1382 aaKnown RBP17.97■□□□□ 0.47
CALCOCO1-217ENST00000549935 ANP32CO43423 234 aa17.97■□□□□ 0.47
CALCOCO1-217ENST00000549935 MTUS2Q5JR59 1369 aa17.97■□□□□ 0.47
CALCOCO1-217ENST00000549935 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
CALCOCO1-217ENST00000549935 BCL11AQ9H165 835 aa17.94■□□□□ 0.46
CALCOCO1-217ENST00000549935 ABCA5Q8WWZ7 1642 aa17.94■□□□□ 0.46
CALCOCO1-217ENST00000549935 SAMD9Q5K651 1589 aa17.92■□□□□ 0.46
CALCOCO1-217ENST00000549935 HIRIP3Q9BW71 556 aaPredicted RBP17.92■□□□□ 0.46
CALCOCO1-217ENST00000549935 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
CALCOCO1-217ENST00000549935 LRRIQ1Q96JM4 1722 aa17.91■□□□□ 0.46
CALCOCO1-217ENST00000549935 CCDC18Q5T9S5 1454 aa17.91■□□□□ 0.46
CALCOCO1-217ENST00000549935 PTPRKQ15262 1439 aa17.89■□□□□ 0.45
CALCOCO1-217ENST00000549935 NCOA2Q15596 1464 aa17.88■□□□□ 0.45
CALCOCO1-217ENST00000549935 HFM1A2PYH4 1435 aa17.88■□□□□ 0.45
CALCOCO1-217ENST00000549935 GRIN2BQ13224 1484 aa17.87■□□□□ 0.45
CALCOCO1-217ENST00000549935 TONSLQ96HA7 1378 aa17.86■□□□□ 0.45
CALCOCO1-217ENST00000549935 PTPN23Q9H3S7 1636 aa17.86■□□□□ 0.45
CALCOCO1-217ENST00000549935 MYOM3Q5VTT5 1437 aa17.86■□□□□ 0.45
CALCOCO1-217ENST00000549935 TRIM52Q96A61 297 aa17.85■□□□□ 0.45
CALCOCO1-217ENST00000549935 UACAQ9BZF9 1416 aa17.85■□□□□ 0.45
CALCOCO1-217ENST00000549935 FANCIQ9NVI1 1328 aa17.85■□□□□ 0.45
CALCOCO1-217ENST00000549935 PDS5BQ9NTI5 1447 aa17.84■□□□□ 0.45
CALCOCO1-217ENST00000549935 SUPT6HQ7KZ85 1726 aaKnown RBP17.84■□□□□ 0.45
CALCOCO1-217ENST00000549935 ERICH6BQ5W0A0 696 aa17.83■□□□□ 0.44
CALCOCO1-217ENST00000549935 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
CALCOCO1-217ENST00000549935 EHBP1L1Q8N3D4 1523 aa17.82■□□□□ 0.44
CALCOCO1-217ENST00000549935 NAIPQ13075 1403 aa17.82■□□□□ 0.44
CALCOCO1-217ENST00000549935 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
CALCOCO1-217ENST00000549935 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
CALCOCO1-217ENST00000549935 MAGI3Q5TCQ9 1506 aa17.77■□□□□ 0.44
CALCOCO1-217ENST00000549935 UGGT2Q9NYU1 1516 aa17.77■□□□□ 0.44
CALCOCO1-217ENST00000549935 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
CALCOCO1-217ENST00000549935 MSH5O43196 834 aa17.76■□□□□ 0.43
CALCOCO1-217ENST00000549935 KDM5BQ9UGL1 1544 aa17.75■□□□□ 0.43
CALCOCO1-217ENST00000549935 ARHGEF11O15085 1522 aa17.74■□□□□ 0.43
CALCOCO1-217ENST00000549935 RRP7BPQ9NSQ0 103 aa17.74■□□□□ 0.43
CALCOCO1-217ENST00000549935 CHIC2Q9UKJ5 165 aa17.73■□□□□ 0.43
CALCOCO1-217ENST00000549935 CDK11AQ9UQ88 783 aaPredicted RBP17.72■□□□□ 0.43
CALCOCO1-217ENST00000549935 HECW1Q76N89 1606 aa17.71■□□□□ 0.43
CALCOCO1-217ENST00000549935 PBRM1Q86U86 1689 aa17.71■□□□□ 0.43
CALCOCO1-217ENST00000549935 IQGAP2Q13576 1575 aa17.69■□□□□ 0.42
CALCOCO1-217ENST00000549935 TCOF1Q13428 1488 aaKnown RBP17.68■□□□□ 0.42
CALCOCO1-217ENST00000549935 EPRSP07814 1512 aaKnown RBP17.68■□□□□ 0.42
CALCOCO1-217ENST00000549935 ARID3CA6NKF2 412 aa17.68■□□□□ 0.42
CALCOCO1-217ENST00000549935 HNRNPUQ00839 825 aaKnown RBP eCLIP17.67■□□□□ 0.42
CALCOCO1-217ENST00000549935 MYT1LQ9UL68 1186 aa17.67■□□□□ 0.42
CALCOCO1-217ENST00000549935 CDK13Q14004 1512 aaKnown RBP17.67■□□□□ 0.42
CALCOCO1-217ENST00000549935 GCC2Q8IWJ2 1684 aa17.67■□□□□ 0.42
CALCOCO1-217ENST00000549935 ADAMTS12P58397 1594 aa17.65■□□□□ 0.42
CALCOCO1-217ENST00000549935 PPP4R2Q9NY27 417 aa17.64■□□□□ 0.41
CALCOCO1-217ENST00000549935 KDM6BO15054 1643 aa17.64■□□□□ 0.41
CALCOCO1-217ENST00000549935 DENND4BO75064 1496 aaPredicted RBP17.64■□□□□ 0.41
CALCOCO1-217ENST00000549935 WASHC2AQ641Q2 1341 aa17.62■□□□□ 0.41
CALCOCO1-217ENST00000549935 WDR62O43379 1518 aa17.62■□□□□ 0.41
CALCOCO1-217ENST00000549935 AKNAQ7Z591 1439 aa17.61■□□□□ 0.41
CALCOCO1-217ENST00000549935 MIA2Q96PC5 1412 aa17.6■□□□□ 0.41
CALCOCO1-217ENST00000549935 CNTLNQ9NXG0 1405 aa17.6■□□□□ 0.41
CALCOCO1-217ENST00000549935 HSPA5P11021 654 aaKnown RBP17.59■□□□□ 0.41
CALCOCO1-217ENST00000549935 MPHOSPH9Q99550 1183 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms