RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 KIF13AQ9H1H9 1805 aa23.88■■□□□ 1.41
TROAP-211ENST00000549891 CUL7Q14999 1698 aa23.86■■□□□ 1.41
TROAP-211ENST00000549891 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
TROAP-211ENST00000549891 KIAA0586Q9BVV6 1533 aa23.8■■□□□ 1.4
TROAP-211ENST00000549891 NPM1P06748 294 aaKnown RBP eCLIP23.8■■□□□ 1.4
TROAP-211ENST00000549891 IGF1RP08069 1367 aa23.79■■□□□ 1.4
TROAP-211ENST00000549891 MAPKBP1O60336 1514 aa23.74■■□□□ 1.39
TROAP-211ENST00000549891 ADCY10Q96PN6 1610 aa23.73■■□□□ 1.39
TROAP-211ENST00000549891 ABCC10Q5T3U5 1492 aa23.72■■□□□ 1.39
TROAP-211ENST00000549891 FAM69CQ0P6D2 419 aa23.69■■□□□ 1.38
TROAP-211ENST00000549891 DIP2BQ9P265 1576 aa23.66■■□□□ 1.38
TROAP-211ENST00000549891 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
TROAP-211ENST00000549891 CARMIL2Q6F5E8 1435 aa23.6■■□□□ 1.37
TROAP-211ENST00000549891 PTPRGP23470 1445 aa23.59■■□□□ 1.37
TROAP-211ENST00000549891 IQGAP2Q13576 1575 aa23.57■■□□□ 1.36
TROAP-211ENST00000549891 TSPOAP1O95153 1857 aa23.55■■□□□ 1.36
TROAP-211ENST00000549891 TNIKQ9UKE5 1360 aa23.54■■□□□ 1.36
TROAP-211ENST00000549891 KDM6BO15054 1643 aa23.51■■□□□ 1.35
TROAP-211ENST00000549891 ABCC2Q92887 1545 aa23.49■■□□□ 1.35
TROAP-211ENST00000549891 TTBK1Q5TCY1 1321 aaPredicted RBP23.49■■□□□ 1.35
TROAP-211ENST00000549891 RAPGEF2Q9Y4G8 1499 aa23.45■■□□□ 1.34
TROAP-211ENST00000549891 UHRF1BP1LA0JNW5 1464 aa23.44■■□□□ 1.34
TROAP-211ENST00000549891 PLB1Q6P1J6 1458 aa23.43■■□□□ 1.34
TROAP-211ENST00000549891 DISP1Q96F81 1524 aa23.42■■□□□ 1.34
TROAP-211ENST00000549891 ASXL2Q76L83 1435 aa23.42■■□□□ 1.34
TROAP-211ENST00000549891 UACAQ9BZF9 1416 aa23.42■■□□□ 1.34
TROAP-211ENST00000549891 UGGT2Q9NYU1 1516 aa23.4■■□□□ 1.34
TROAP-211ENST00000549891 GLI2P10070 1586 aa23.4■■□□□ 1.34
TROAP-211ENST00000549891 KIAA0556O60303 1618 aa23.35■■□□□ 1.33
TROAP-211ENST00000549891 CTTNBP2Q8WZ74 1663 aa23.33■■□□□ 1.33
TROAP-211ENST00000549891 KDM5BQ9UGL1 1544 aa23.33■■□□□ 1.32
TROAP-211ENST00000549891 PPRC1Q5VV67 1664 aaKnown RBP23.32■■□□□ 1.32
TROAP-211ENST00000549891 ZCCHC11Q5TAX3 1644 aaKnown RBP23.3■■□□□ 1.32
TROAP-211ENST00000549891 MAP3K4Q9Y6R4 1608 aa23.27■■□□□ 1.32
TROAP-211ENST00000549891 EPRSP07814 1512 aaKnown RBP23.27■■□□□ 1.32
TROAP-211ENST00000549891 KDM4FA0A1W2PPD8 638 aa23.25■■□□□ 1.31
TROAP-211ENST00000549891 GOLGA3Q08378 1498 aa23.24■■□□□ 1.31
TROAP-211ENST00000549891 TEX14Q8IWB6 1497 aa23.24■■□□□ 1.31
TROAP-211ENST00000549891 WDR7Q9Y4E6 1490 aa23.18■■□□□ 1.3
TROAP-211ENST00000549891 PRXQ9BXM0 1461 aa23.15■■□□□ 1.3
TROAP-211ENST00000549891 ABCA8O94911 1581 aa23.13■■□□□ 1.29
TROAP-211ENST00000549891 COL17A1Q9UMD9 1497 aaPredicted RBP23.11■■□□□ 1.29
TROAP-211ENST00000549891 FAM9AQ8IZU1 332 aaPredicted RBP23.11■■□□□ 1.29
TROAP-211ENST00000549891 CFAP43Q8NDM7 1665 aa23.11■■□□□ 1.29
TROAP-211ENST00000549891 ADGRL1O94910 1474 aa23.09■■□□□ 1.29
TROAP-211ENST00000549891 MAGI3Q5TCQ9 1506 aa23.05■■□□□ 1.28
TROAP-211ENST00000549891 CD109Q6YHK3 1445 aa23.05■■□□□ 1.28
TROAP-211ENST00000549891 KCNH8Q96L42 1107 aa23.03■■□□□ 1.28
TROAP-211ENST00000549891 CSRNP3Q8WYN3 585 aa22.95■■□□□ 1.26
TROAP-211ENST00000549891 SAMD9Q5K651 1589 aa22.93■■□□□ 1.26
TROAP-211ENST00000549891 P3H3Q8IVL6 736 aa22.93■■□□□ 1.26
TROAP-211ENST00000549891 ATP10BO94823 1461 aa22.92■■□□□ 1.26
TROAP-211ENST00000549891 EEA1Q15075 1411 aa22.89■■□□□ 1.25
TROAP-211ENST00000549891 RAPGEF6Q8TEU7 1601 aa22.89■■□□□ 1.25
TROAP-211ENST00000549891 ARID3CA6NKF2 412 aa22.88■■□□□ 1.25
TROAP-211ENST00000549891 ARAP3Q8WWN8 1544 aa22.87■■□□□ 1.25
TROAP-211ENST00000549891 ABCA9Q8IUA7 1624 aa22.87■■□□□ 1.25
TROAP-211ENST00000549891 PHLDB1Q86UU1 1377 aa22.85■■□□□ 1.25
TROAP-211ENST00000549891 KIF21BO75037 1637 aa22.82■■□□□ 1.24
TROAP-211ENST00000549891 HECW2Q9P2P5 1572 aa22.81■■□□□ 1.24
TROAP-211ENST00000549891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.81■■□□□ 1.24
TROAP-211ENST00000549891 HNRNPUL2Q1KMD3 747 aaKnown RBP22.81■■□□□ 1.24
TROAP-211ENST00000549891 NEO1Q92859 1461 aa22.77■■□□□ 1.24
TROAP-211ENST00000549891 NUP153P49790 1475 aaKnown RBP22.75■■□□□ 1.23
TROAP-211ENST00000549891 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
TROAP-211ENST00000549891 FHOD3Q2V2M9 1422 aa22.73■■□□□ 1.23
TROAP-211ENST00000549891 EFCAB5A4FU69 1503 aa22.71■■□□□ 1.23
TROAP-211ENST00000549891 PLEKHD1A6NEE1 506 aa22.69■■□□□ 1.22
TROAP-211ENST00000549891 RAPGEF3O95398 923 aa22.68■■□□□ 1.22
TROAP-211ENST00000549891 ILDR1Q86SU0 546 aaPredicted RBP22.67■■□□□ 1.22
TROAP-211ENST00000549891 CFAP74Q9C0B2 1584 aa22.66■■□□□ 1.22
TROAP-211ENST00000549891 ADAMTSL3P82987 1691 aa22.65■■□□□ 1.22
TROAP-211ENST00000549891 FRMPD1Q5SYB0 1578 aa22.64■■□□□ 1.22
TROAP-211ENST00000549891 BCORL1Q5H9F3 1711 aa22.61■■□□□ 1.21
TROAP-211ENST00000549891 DENND4BO75064 1496 aaPredicted RBP22.6■■□□□ 1.21
TROAP-211ENST00000549891 PTPRMP28827 1452 aa22.6■■□□□ 1.21
TROAP-211ENST00000549891 RICTORQ6R327 1708 aa22.6■■□□□ 1.21
TROAP-211ENST00000549891 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.59■■□□□ 1.21
TROAP-211ENST00000549891 FANCAO15360 1455 aa22.59■■□□□ 1.21
TROAP-211ENST00000549891 ARID4BQ4LE39 1312 aaPredicted RBP22.58■■□□□ 1.21
TROAP-211ENST00000549891 AKNAQ7Z591 1439 aa22.57■■□□□ 1.2
TROAP-211ENST00000549891 ARHGEF40Q8TER5 1519 aa22.57■■□□□ 1.2
TROAP-211ENST00000549891 TTC37Q6PGP7 1564 aa22.55■■□□□ 1.2
TROAP-211ENST00000549891 MADDQ8WXG6 1647 aa22.53■■□□□ 1.2
TROAP-211ENST00000549891 CDK13Q14004 1512 aaKnown RBP22.52■■□□□ 1.19
TROAP-211ENST00000549891 FMN1Q68DA7 1419 aa22.51■■□□□ 1.19
TROAP-211ENST00000549891 UBTFP17480 764 aaKnown RBP22.51■■□□□ 1.19
TROAP-211ENST00000549891 ZMYM4Q5VZL5 1548 aa22.51■■□□□ 1.19
TROAP-211ENST00000549891 HECW1Q76N89 1606 aa22.5■■□□□ 1.19
TROAP-211ENST00000549891 POGZQ7Z3K3 1410 aa22.48■■□□□ 1.19
TROAP-211ENST00000549891 RIMS1Q86UR5 1692 aaKnown RBP22.47■■□□□ 1.19
TROAP-211ENST00000549891 MAGI2Q86UL8 1455 aa22.47■■□□□ 1.19
TROAP-211ENST00000549891 ZFYVE16Q7Z3T8 1539 aa22.47■■□□□ 1.19
TROAP-211ENST00000549891 CDK11AQ9UQ88 783 aaPredicted RBP22.45■■□□□ 1.18
TROAP-211ENST00000549891 PLCH2O75038 1416 aa22.45■■□□□ 1.18
TROAP-211ENST00000549891 MYO5CQ9NQX4 1742 aa22.45■■□□□ 1.18
TROAP-211ENST00000549891 ATP1B4Q9UN42 357 aaPredicted RBP22.44■■□□□ 1.18
TROAP-211ENST00000549891 PCF11O94913 1555 aaKnown RBP22.43■■□□□ 1.18
TROAP-211ENST00000549891 ARHGAP35Q9NRY4 1499 aa22.42■■□□□ 1.18
TROAP-211ENST00000549891 EHMT2Q96KQ7 1210 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms