RNA–Protein interactions for RNA: ENST00000548232.1

NR4A1-209, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best) BASIC

Gene NR4A1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-209ENST00000548232 IGF1RP08069 1367 aa22.83■■□□□ 1.25
NR4A1-209ENST00000548232 FAM69CQ0P6D2 419 aa22.8■■□□□ 1.24
NR4A1-209ENST00000548232 KIF27Q86VH2 1401 aa22.8■■□□□ 1.24
NR4A1-209ENST00000548232 RUSC2Q8N2Y8 1516 aa22.77■■□□□ 1.24
NR4A1-209ENST00000548232 TTBK1Q5TCY1 1321 aaPredicted RBP22.77■■□□□ 1.24
NR4A1-209ENST00000548232 KIAA0586Q9BVV6 1533 aa22.74■■□□□ 1.23
NR4A1-209ENST00000548232 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
NR4A1-209ENST00000548232 KIF13AQ9H1H9 1805 aa22.68■■□□□ 1.22
NR4A1-209ENST00000548232 ABCC10Q5T3U5 1492 aa22.66■■□□□ 1.22
NR4A1-209ENST00000548232 CUL7Q14999 1698 aa22.65■■□□□ 1.22
NR4A1-209ENST00000548232 PTPRGP23470 1445 aa22.64■■□□□ 1.21
NR4A1-209ENST00000548232 ADCY10Q96PN6 1610 aa22.63■■□□□ 1.21
NR4A1-209ENST00000548232 MAPKBP1O60336 1514 aa22.61■■□□□ 1.21
NR4A1-209ENST00000548232 CARMIL2Q6F5E8 1435 aa22.57■■□□□ 1.2
NR4A1-209ENST00000548232 TNIKQ9UKE5 1360 aa22.55■■□□□ 1.2
NR4A1-209ENST00000548232 DIP2BQ9P265 1576 aa22.55■■□□□ 1.2
NR4A1-209ENST00000548232 IQGAP2Q13576 1575 aa22.46■■□□□ 1.19
NR4A1-209ENST00000548232 TSPOAP1O95153 1857 aa22.45■■□□□ 1.18
NR4A1-209ENST00000548232 ABCC2Q92887 1545 aa22.44■■□□□ 1.18
NR4A1-209ENST00000548232 KDM6BO15054 1643 aa22.42■■□□□ 1.18
NR4A1-209ENST00000548232 ASXL2Q76L83 1435 aa22.42■■□□□ 1.18
NR4A1-209ENST00000548232 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
NR4A1-209ENST00000548232 UACAQ9BZF9 1416 aa22.41■■□□□ 1.18
NR4A1-209ENST00000548232 DISP1Q96F81 1524 aa22.39■■□□□ 1.17
NR4A1-209ENST00000548232 PLB1Q6P1J6 1458 aa22.39■■□□□ 1.17
NR4A1-209ENST00000548232 KDM4FA0A1W2PPD8 638 aa22.38■■□□□ 1.17
NR4A1-209ENST00000548232 UHRF1BP1LA0JNW5 1464 aa22.36■■□□□ 1.17
NR4A1-209ENST00000548232 UGGT2Q9NYU1 1516 aa22.31■■□□□ 1.16
NR4A1-209ENST00000548232 GLI2P10070 1586 aa22.27■■□□□ 1.16
NR4A1-209ENST00000548232 KDM5BQ9UGL1 1544 aa22.26■■□□□ 1.15
NR4A1-209ENST00000548232 EPRSP07814 1512 aaKnown RBP22.25■■□□□ 1.15
NR4A1-209ENST00000548232 KCNH8Q96L42 1107 aa22.24■■□□□ 1.15
NR4A1-209ENST00000548232 KIAA0556O60303 1618 aa22.24■■□□□ 1.15
NR4A1-209ENST00000548232 ZCCHC11Q5TAX3 1644 aaKnown RBP22.2■■□□□ 1.14
NR4A1-209ENST00000548232 PPRC1Q5VV67 1664 aaKnown RBP22.19■■□□□ 1.14
NR4A1-209ENST00000548232 COL17A1Q9UMD9 1497 aaPredicted RBP22.18■■□□□ 1.14
NR4A1-209ENST00000548232 FAM9AQ8IZU1 332 aaPredicted RBP22.18■■□□□ 1.14
NR4A1-209ENST00000548232 GOLGA3Q08378 1498 aa22.17■■□□□ 1.14
NR4A1-209ENST00000548232 P3H3Q8IVL6 736 aa22.17■■□□□ 1.14
NR4A1-209ENST00000548232 TEX14Q8IWB6 1497 aa22.15■■□□□ 1.14
NR4A1-209ENST00000548232 ARID3CA6NKF2 412 aa22.15■■□□□ 1.14
NR4A1-209ENST00000548232 WDR7Q9Y4E6 1490 aa22.15■■□□□ 1.14
NR4A1-209ENST00000548232 MAP3K4Q9Y6R4 1608 aa22.13■■□□□ 1.13
NR4A1-209ENST00000548232 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
NR4A1-209ENST00000548232 PRXQ9BXM0 1461 aa22.11■■□□□ 1.13
NR4A1-209ENST00000548232 ADGRL1O94910 1474 aa22.09■■□□□ 1.13
NR4A1-209ENST00000548232 CD109Q6YHK3 1445 aa22.09■■□□□ 1.13
NR4A1-209ENST00000548232 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
NR4A1-209ENST00000548232 ABCA8O94911 1581 aa22.05■■□□□ 1.12
NR4A1-209ENST00000548232 RANGAP1P46060 587 aaPredicted RBP22.05■■□□□ 1.12
NR4A1-209ENST00000548232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.01■■□□□ 1.11
NR4A1-209ENST00000548232 HNRNPUL2Q1KMD3 747 aaKnown RBP22.01■■□□□ 1.11
NR4A1-209ENST00000548232 MAGI3Q5TCQ9 1506 aa21.99■■□□□ 1.11
NR4A1-209ENST00000548232 ATP10BO94823 1461 aa21.96■■□□□ 1.11
NR4A1-209ENST00000548232 CFAP43Q8NDM7 1665 aa21.94■■□□□ 1.1
NR4A1-209ENST00000548232 ILDR1Q86SU0 546 aaPredicted RBP21.87■■□□□ 1.09
NR4A1-209ENST00000548232 RAPGEF3O95398 923 aa21.85■■□□□ 1.09
NR4A1-209ENST00000548232 ARAP3Q8WWN8 1544 aa21.83■■□□□ 1.09
NR4A1-209ENST00000548232 SAMD9Q5K651 1589 aa21.82■■□□□ 1.08
NR4A1-209ENST00000548232 PLEKHD1A6NEE1 506 aa21.81■■□□□ 1.08
NR4A1-209ENST00000548232 EHMT2Q96KQ7 1210 aa21.81■■□□□ 1.08
NR4A1-209ENST00000548232 EEA1Q15075 1411 aa21.8■■□□□ 1.08
NR4A1-209ENST00000548232 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
NR4A1-209ENST00000548232 PHLDB1Q86UU1 1377 aa21.8■■□□□ 1.08
NR4A1-209ENST00000548232 RAPGEF6Q8TEU7 1601 aa21.8■■□□□ 1.08
NR4A1-209ENST00000548232 HECW2Q9P2P5 1572 aa21.79■■□□□ 1.08
NR4A1-209ENST00000548232 ARID4BQ4LE39 1312 aaPredicted RBP21.78■■□□□ 1.08
NR4A1-209ENST00000548232 KIF21BO75037 1637 aa21.77■■□□□ 1.07
NR4A1-209ENST00000548232 ABCA9Q8IUA7 1624 aa21.77■■□□□ 1.07
NR4A1-209ENST00000548232 NUP153P49790 1475 aaKnown RBP21.76■■□□□ 1.07
NR4A1-209ENST00000548232 NEO1Q92859 1461 aa21.72■■□□□ 1.07
NR4A1-209ENST00000548232 ATP1B4Q9UN42 357 aaPredicted RBP21.72■■□□□ 1.07
NR4A1-209ENST00000548232 UBTFP17480 764 aaKnown RBP21.71■■□□□ 1.07
NR4A1-209ENST00000548232 PTPRMP28827 1452 aa21.63■■□□□ 1.05
NR4A1-209ENST00000548232 AKNAQ7Z591 1439 aa21.63■■□□□ 1.05
NR4A1-209ENST00000548232 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
NR4A1-209ENST00000548232 DENND4BO75064 1496 aaPredicted RBP21.62■■□□□ 1.05
NR4A1-209ENST00000548232 FANCAO15360 1455 aa21.6■■□□□ 1.05
NR4A1-209ENST00000548232 EFCAB5A4FU69 1503 aa21.6■■□□□ 1.05
NR4A1-209ENST00000548232 FRMPD1Q5SYB0 1578 aa21.57■■□□□ 1.04
NR4A1-209ENST00000548232 ADAMTSL3P82987 1691 aa21.57■■□□□ 1.04
NR4A1-209ENST00000548232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.57■■□□□ 1.04
NR4A1-209ENST00000548232 CDK13Q14004 1512 aaKnown RBP21.55■■□□□ 1.04
NR4A1-209ENST00000548232 MLECQ14165 292 aa21.54■■□□□ 1.04
NR4A1-209ENST00000548232 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
NR4A1-209ENST00000548232 CDK11AQ9UQ88 783 aaPredicted RBP21.53■■□□□ 1.04
NR4A1-209ENST00000548232 TTC37Q6PGP7 1564 aa21.51■■□□□ 1.03
NR4A1-209ENST00000548232 BCORL1Q5H9F3 1711 aa21.51■■□□□ 1.03
NR4A1-209ENST00000548232 SCAPERQ9BY12 1400 aa21.5■■□□□ 1.03
NR4A1-209ENST00000548232 EFCAB2Q5VUJ9 269 aa21.5■■□□□ 1.03
NR4A1-209ENST00000548232 MADDQ8WXG6 1647 aa21.5■■□□□ 1.03
NR4A1-209ENST00000548232 FMN1Q68DA7 1419 aa21.49■■□□□ 1.03
NR4A1-209ENST00000548232 CFAP74Q9C0B2 1584 aa21.48■■□□□ 1.03
NR4A1-209ENST00000548232 PLCH2O75038 1416 aa21.48■■□□□ 1.03
NR4A1-209ENST00000548232 POGZQ7Z3K3 1410 aa21.48■■□□□ 1.03
NR4A1-209ENST00000548232 YEATS2Q9ULM3 1422 aa21.48■■□□□ 1.03
NR4A1-209ENST00000548232 RICTORQ6R327 1708 aa21.47■■□□□ 1.03
NR4A1-209ENST00000548232 ARHGEF40Q8TER5 1519 aa21.47■■□□□ 1.03
NR4A1-209ENST00000548232 ARHGAP35Q9NRY4 1499 aa21.45■■□□□ 1.03
NR4A1-209ENST00000548232 HSPA2P54652 639 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 317 ms