RNA–Protein interactions for RNA: ENST00000548209.5

LETMD1-213, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-213ENST00000548209 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
LETMD1-213ENST00000548209 NPM1P06748 294 aaKnown RBP eCLIP18.48■□□□□ 0.55
LETMD1-213ENST00000548209 HECW2Q9P2P5 1572 aa18.47■□□□□ 0.55
LETMD1-213ENST00000548209 ADCY10Q96PN6 1610 aa18.46■□□□□ 0.55
LETMD1-213ENST00000548209 ADGRL1O94910 1474 aa18.44■□□□□ 0.54
LETMD1-213ENST00000548209 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
LETMD1-213ENST00000548209 JPH4Q96JJ6 628 aa18.37■□□□□ 0.53
LETMD1-213ENST00000548209 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
LETMD1-213ENST00000548209 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
LETMD1-213ENST00000548209 PPRC1Q5VV67 1664 aaKnown RBP18.34■□□□□ 0.53
LETMD1-213ENST00000548209 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
LETMD1-213ENST00000548209 BIVM-ERCC5R4GMW8 1640 aa18.28■□□□□ 0.52
LETMD1-213ENST00000548209 FBXO41Q8TF61 875 aa18.27■□□□□ 0.52
LETMD1-213ENST00000548209 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
LETMD1-213ENST00000548209 GLI2P10070 1586 aa18.2■□□□□ 0.5
LETMD1-213ENST00000548209 CUL7Q14999 1698 aa18.19■□□□□ 0.5
LETMD1-213ENST00000548209 MAP3K4Q9Y6R4 1608 aa18.13■□□□□ 0.49
LETMD1-213ENST00000548209 ASXL2Q76L83 1435 aa18.13■□□□□ 0.49
LETMD1-213ENST00000548209 PLB1Q6P1J6 1458 aa18.13■□□□□ 0.49
LETMD1-213ENST00000548209 COL17A1Q9UMD9 1497 aaPredicted RBP18.13■□□□□ 0.49
LETMD1-213ENST00000548209 ABCC2Q92887 1545 aa18.12■□□□□ 0.49
LETMD1-213ENST00000548209 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
LETMD1-213ENST00000548209 KIAA0586Q9BVV6 1533 aa18.09■□□□□ 0.49
LETMD1-213ENST00000548209 TEX14Q8IWB6 1497 aa18.07■□□□□ 0.48
LETMD1-213ENST00000548209 PTPRGP23470 1445 aa18.07■□□□□ 0.48
LETMD1-213ENST00000548209 LMTK3Q96Q04 1460 aa18.07■□□□□ 0.48
LETMD1-213ENST00000548209 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
LETMD1-213ENST00000548209 EPRSP07814 1512 aaKnown RBP18.02■□□□□ 0.47
LETMD1-213ENST00000548209 KIF21BO75037 1637 aa18.01■□□□□ 0.47
LETMD1-213ENST00000548209 TNIKQ9UKE5 1360 aa17.98■□□□□ 0.47
LETMD1-213ENST00000548209 UHRF1BP1LA0JNW5 1464 aa17.98■□□□□ 0.47
LETMD1-213ENST00000548209 ZCCHC11Q5TAX3 1644 aaKnown RBP17.98■□□□□ 0.47
LETMD1-213ENST00000548209 CARMIL2Q6F5E8 1435 aa17.97■□□□□ 0.47
LETMD1-213ENST00000548209 UACAQ9BZF9 1416 aa17.92■□□□□ 0.46
LETMD1-213ENST00000548209 CFAP43Q8NDM7 1665 aa17.91■□□□□ 0.46
LETMD1-213ENST00000548209 KDM5BQ9UGL1 1544 aa17.91■□□□□ 0.46
LETMD1-213ENST00000548209 IQGAP2Q13576 1575 aa17.89■□□□□ 0.45
LETMD1-213ENST00000548209 ADAMTSL3P82987 1691 aa17.87■□□□□ 0.45
LETMD1-213ENST00000548209 SOCS7O14512 581 aa17.85■□□□□ 0.45
LETMD1-213ENST00000548209 PTPRMP28827 1452 aa17.85■□□□□ 0.45
LETMD1-213ENST00000548209 PCF11O94913 1555 aaKnown RBP17.84■□□□□ 0.45
LETMD1-213ENST00000548209 IGF1RP08069 1367 aa17.84■□□□□ 0.45
LETMD1-213ENST00000548209 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.45
LETMD1-213ENST00000548209 MAGI3Q5TCQ9 1506 aa17.82■□□□□ 0.44
LETMD1-213ENST00000548209 ILDR2Q71H61 639 aa17.81■□□□□ 0.44
LETMD1-213ENST00000548209 DISP3Q9P2K9 1392 aa17.8■□□□□ 0.44
LETMD1-213ENST00000548209 DISP1Q96F81 1524 aa17.8■□□□□ 0.44
LETMD1-213ENST00000548209 KIF27Q86VH2 1401 aa17.8■□□□□ 0.44
LETMD1-213ENST00000548209 CD109Q6YHK3 1445 aa17.79■□□□□ 0.44
LETMD1-213ENST00000548209 BCORL1Q5H9F3 1711 aa17.78■□□□□ 0.44
LETMD1-213ENST00000548209 MADDQ8WXG6 1647 aa17.76■□□□□ 0.43
LETMD1-213ENST00000548209 KIAA0556O60303 1618 aa17.75■□□□□ 0.43
LETMD1-213ENST00000548209 CARMIL1Q5VZK9 1371 aa17.74■□□□□ 0.43
LETMD1-213ENST00000548209 RIMS1Q86UR5 1692 aaKnown RBP17.73■□□□□ 0.43
LETMD1-213ENST00000548209 ARAP3Q8WWN8 1544 aa17.71■□□□□ 0.43
LETMD1-213ENST00000548209 CERKQ8TCT0 537 aa17.7■□□□□ 0.42
LETMD1-213ENST00000548209 UGGT2Q9NYU1 1516 aa17.7■□□□□ 0.42
LETMD1-213ENST00000548209 KCNH8Q96L42 1107 aa17.69■□□□□ 0.42
LETMD1-213ENST00000548209 SPATA31D1Q6ZQQ2 1576 aa17.69■□□□□ 0.42
LETMD1-213ENST00000548209 HSPA2P54652 639 aa17.62■□□□□ 0.41
LETMD1-213ENST00000548209 ARID4BQ4LE39 1312 aaPredicted RBP17.61■□□□□ 0.41
LETMD1-213ENST00000548209 CTTNBP2Q8WZ74 1663 aa17.61■□□□□ 0.41
LETMD1-213ENST00000548209 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
LETMD1-213ENST00000548209 ABCA8O94911 1581 aa17.59■□□□□ 0.41
LETMD1-213ENST00000548209 FRMPD1Q5SYB0 1578 aa17.57■□□□□ 0.4
LETMD1-213ENST00000548209 ABCA9Q8IUA7 1624 aa17.56■□□□□ 0.4
LETMD1-213ENST00000548209 PHLDB1Q86UU1 1377 aa17.55■□□□□ 0.4
LETMD1-213ENST00000548209 FER1L4A9Z1Z3 1794 aa17.53■□□□□ 0.4
LETMD1-213ENST00000548209 ARHGEF40Q8TER5 1519 aa17.53■□□□□ 0.4
LETMD1-213ENST00000548209 RAPGEF3O95398 923 aa17.53■□□□□ 0.4
LETMD1-213ENST00000548209 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
LETMD1-213ENST00000548209 RAPGEF2Q9Y4G8 1499 aa17.51■□□□□ 0.39
LETMD1-213ENST00000548209 PREX1Q8TCU6 1659 aa17.5■□□□□ 0.39
LETMD1-213ENST00000548209 NEO1Q92859 1461 aa17.5■□□□□ 0.39
LETMD1-213ENST00000548209 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
LETMD1-213ENST00000548209 GOLGA3Q08378 1498 aa17.49■□□□□ 0.39
LETMD1-213ENST00000548209 STRCQ7RTU9 1775 aa17.48■□□□□ 0.39
LETMD1-213ENST00000548209 SIGLEC1Q9BZZ2 1709 aa17.45■□□□□ 0.38
LETMD1-213ENST00000548209 FANCAO15360 1455 aa17.44■□□□□ 0.38
LETMD1-213ENST00000548209 POGZQ7Z3K3 1410 aa17.44■□□□□ 0.38
LETMD1-213ENST00000548209 TTC37Q6PGP7 1564 aa17.44■□□□□ 0.38
LETMD1-213ENST00000548209 ARID3CA6NKF2 412 aa17.41■□□□□ 0.38
LETMD1-213ENST00000548209 ATP10BO94823 1461 aa17.4■□□□□ 0.38
LETMD1-213ENST00000548209 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
LETMD1-213ENST00000548209 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
LETMD1-213ENST00000548209 CFAP74Q9C0B2 1584 aa17.37■□□□□ 0.37
LETMD1-213ENST00000548209 AKNAQ7Z591 1439 aa17.37■□□□□ 0.37
LETMD1-213ENST00000548209 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
LETMD1-213ENST00000548209 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
LETMD1-213ENST00000548209 EFCAB5A4FU69 1503 aa17.36■□□□□ 0.37
LETMD1-213ENST00000548209 ZFYVE16Q7Z3T8 1539 aa17.35■□□□□ 0.37
LETMD1-213ENST00000548209 ZMYM4Q5VZL5 1548 aa17.34■□□□□ 0.37
LETMD1-213ENST00000548209 MLECQ14165 292 aa17.33■□□□□ 0.36
LETMD1-213ENST00000548209 FAM9AQ8IZU1 332 aaPredicted RBP17.33■□□□□ 0.36
LETMD1-213ENST00000548209 FHOD3Q2V2M9 1422 aa17.31■□□□□ 0.36
LETMD1-213ENST00000548209 RAPGEF6Q8TEU7 1601 aa17.31■□□□□ 0.36
LETMD1-213ENST00000548209 IQSEC2Q5JU85 1478 aa17.28■□□□□ 0.36
LETMD1-213ENST00000548209 ARHGEF12Q9NZN5 1544 aa17.27■□□□□ 0.36
LETMD1-213ENST00000548209 HECW1Q76N89 1606 aa17.27■□□□□ 0.36
LETMD1-213ENST00000548209 LTBP4Q8N2S1 1624 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms