RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 KIF27Q86VH2 1401 aa35.66■■■■□ 3.3
SSH1-207ENST00000547862 KIF13AQ9H1H9 1805 aa35.62■■■■□ 3.29
SSH1-207ENST00000547862 IGF1RP08069 1367 aa35.56■■■■□ 3.28
SSH1-207ENST00000547862 KIAA0586Q9BVV6 1533 aa35.51■■■■□ 3.27
SSH1-207ENST00000547862 ADCY10Q96PN6 1610 aa35.48■■■■□ 3.27
SSH1-207ENST00000547862 CARMIL1Q5VZK9 1371 aa35.39■■■■□ 3.26
SSH1-207ENST00000547862 MAPKBP1O60336 1514 aa35.34■■■■□ 3.25
SSH1-207ENST00000547862 NPM1P06748 294 aaKnown RBP eCLIP35.34■■■■□ 3.25
SSH1-207ENST00000547862 DIP2BQ9P265 1576 aa35.32■■■■□ 3.24
SSH1-207ENST00000547862 TTBK1Q5TCY1 1321 aaPredicted RBP35.32■■■■□ 3.24
SSH1-207ENST00000547862 IQGAP2Q13576 1575 aa35.3■■■■□ 3.24
SSH1-207ENST00000547862 AEBP2Q6ZN18 517 aaPredicted RBP35.3■■■■□ 3.24
SSH1-207ENST00000547862 ABCC10Q5T3U5 1492 aa35.29■■■■□ 3.24
SSH1-207ENST00000547862 FAM69CQ0P6D2 419 aa35.26■■■■□ 3.24
SSH1-207ENST00000547862 TSPOAP1O95153 1857 aa35.22■■■■□ 3.23
SSH1-207ENST00000547862 PTPRGP23470 1445 aa35.19■■■■□ 3.22
SSH1-207ENST00000547862 CARMIL2Q6F5E8 1435 aa35.19■■■■□ 3.22
SSH1-207ENST00000547862 TNIKQ9UKE5 1360 aa35.13■■■■□ 3.21
SSH1-207ENST00000547862 RAPGEF2Q9Y4G8 1499 aa35.1■■■■□ 3.21
SSH1-207ENST00000547862 KDM6BO15054 1643 aa35.06■■■■□ 3.2
SSH1-207ENST00000547862 DISP1Q96F81 1524 aa35.06■■■■□ 3.2
SSH1-207ENST00000547862 ABCC2Q92887 1545 aa35.05■■■■□ 3.2
SSH1-207ENST00000547862 CTTNBP2Q8WZ74 1663 aa35.03■■■■□ 3.2
SSH1-207ENST00000547862 KIAA0556O60303 1618 aa35■■■■□ 3.19
SSH1-207ENST00000547862 UGGT2Q9NYU1 1516 aa34.99■■■■□ 3.19
SSH1-207ENST00000547862 ASXL2Q76L83 1435 aa34.94■■■■□ 3.18
SSH1-207ENST00000547862 UACAQ9BZF9 1416 aa34.94■■■■□ 3.18
SSH1-207ENST00000547862 UHRF1BP1LA0JNW5 1464 aa34.93■■■■□ 3.18
SSH1-207ENST00000547862 ZCCHC11Q5TAX3 1644 aaKnown RBP34.89■■■■□ 3.18
SSH1-207ENST00000547862 PLB1Q6P1J6 1458 aa34.88■■■■□ 3.17
SSH1-207ENST00000547862 PPRC1Q5VV67 1664 aaKnown RBP34.86■■■■□ 3.17
SSH1-207ENST00000547862 GLI2P10070 1586 aa34.82■■■■□ 3.16
SSH1-207ENST00000547862 KDM5BQ9UGL1 1544 aa34.79■■■■□ 3.16
SSH1-207ENST00000547862 MAP3K4Q9Y6R4 1608 aa34.73■■■■□ 3.15
SSH1-207ENST00000547862 EPRSP07814 1512 aaKnown RBP34.72■■■■□ 3.15
SSH1-207ENST00000547862 GOLGA3Q08378 1498 aa34.7■■■■□ 3.15
SSH1-207ENST00000547862 PRXQ9BXM0 1461 aa34.7■■■■□ 3.15
SSH1-207ENST00000547862 ABCA8O94911 1581 aa34.62■■■■□ 3.13
SSH1-207ENST00000547862 WDR7Q9Y4E6 1490 aa34.61■■■■□ 3.13
SSH1-207ENST00000547862 TEX14Q8IWB6 1497 aa34.56■■■■□ 3.12
SSH1-207ENST00000547862 KDM4FA0A1W2PPD8 638 aa34.52■■■■□ 3.12
SSH1-207ENST00000547862 COL17A1Q9UMD9 1497 aaPredicted RBP34.49■■■■□ 3.11
SSH1-207ENST00000547862 CFAP43Q8NDM7 1665 aa34.48■■■■□ 3.11
SSH1-207ENST00000547862 P3H3Q8IVL6 736 aa34.46■■■■□ 3.11
SSH1-207ENST00000547862 ARID3CA6NKF2 412 aa34.43■■■■□ 3.1
SSH1-207ENST00000547862 KCNH8Q96L42 1107 aa34.41■■■■□ 3.1
SSH1-207ENST00000547862 SAMD9Q5K651 1589 aa34.4■■■■□ 3.1
SSH1-207ENST00000547862 ADGRL1O94910 1474 aa34.39■■■■□ 3.1
SSH1-207ENST00000547862 CSRNP3Q8WYN3 585 aa34.38■■■■□ 3.09
SSH1-207ENST00000547862 CD109Q6YHK3 1445 aa34.36■■■■□ 3.09
SSH1-207ENST00000547862 RAPGEF6Q8TEU7 1601 aa34.32■■■■□ 3.08
SSH1-207ENST00000547862 MAGI3Q5TCQ9 1506 aa34.31■■■■□ 3.08
SSH1-207ENST00000547862 RANGAP1P46060 587 aaPredicted RBP34.29■■■■□ 3.08
SSH1-207ENST00000547862 FAM9AQ8IZU1 332 aaPredicted RBP34.29■■■■□ 3.08
SSH1-207ENST00000547862 ATP10BO94823 1461 aa34.27■■■■□ 3.08
SSH1-207ENST00000547862 EEA1Q15075 1411 aa34.27■■■■□ 3.08
SSH1-207ENST00000547862 FHOD3Q2V2M9 1422 aa34.18■■■■□ 3.06
SSH1-207ENST00000547862 ABCA9Q8IUA7 1624 aa34.18■■■■□ 3.06
SSH1-207ENST00000547862 KIF21BO75037 1637 aa34.16■■■■□ 3.06
SSH1-207ENST00000547862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.14■■■■□ 3.06
SSH1-207ENST00000547862 HNRNPUL2Q1KMD3 747 aaKnown RBP34.14■■■■□ 3.06
SSH1-207ENST00000547862 NUP153P49790 1475 aaKnown RBP34.11■■■■□ 3.05
SSH1-207ENST00000547862 ARAP3Q8WWN8 1544 aa34.04■■■■□ 3.04
SSH1-207ENST00000547862 EHMT2Q96KQ7 1210 aa34.03■■■■□ 3.04
SSH1-207ENST00000547862 EFCAB5A4FU69 1503 aa34.03■■■■□ 3.04
SSH1-207ENST00000547862 HECW2Q9P2P5 1572 aa33.96■■■■□ 3.03
SSH1-207ENST00000547862 NEO1Q92859 1461 aa33.92■■■■□ 3.02
SSH1-207ENST00000547862 FRMPD1Q5SYB0 1578 aa33.92■■■■□ 3.02
SSH1-207ENST00000547862 CDK13Q14004 1512 aaKnown RBP33.88■■■■□ 3.01
SSH1-207ENST00000547862 PHLDB1Q86UU1 1377 aa33.86■■■■□ 3.01
SSH1-207ENST00000547862 TTC37Q6PGP7 1564 aa33.86■■■■□ 3.01
SSH1-207ENST00000547862 RAPGEF3O95398 923 aa33.86■■■■□ 3.01
SSH1-207ENST00000547862 CFAP74Q9C0B2 1584 aa33.83■■■■□ 3.01
SSH1-207ENST00000547862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.83■■■■□ 3.01
SSH1-207ENST00000547862 PLEKHD1A6NEE1 506 aa33.82■■■■□ 3
SSH1-207ENST00000547862 UBTFP17480 764 aaKnown RBP33.82■■■■□ 3
SSH1-207ENST00000547862 RICTORQ6R327 1708 aa33.79■■■■□ 3
SSH1-207ENST00000547862 HECW1Q76N89 1606 aa33.77■■■■□ 3
SSH1-207ENST00000547862 CHIC1Q5VXU3 224 aa33.76■■■□□ 2.99
SSH1-207ENST00000547862 FANCAO15360 1455 aa33.76■■■□□ 2.99
SSH1-207ENST00000547862 ADAMTSL3P82987 1691 aa33.75■■■□□ 2.99
SSH1-207ENST00000547862 ARHGEF40Q8TER5 1519 aa33.74■■■□□ 2.99
SSH1-207ENST00000547862 ATP1B4Q9UN42 357 aaPredicted RBP33.73■■■□□ 2.99
SSH1-207ENST00000547862 BCORL1Q5H9F3 1711 aa33.73■■■□□ 2.99
SSH1-207ENST00000547862 DENND4BO75064 1496 aaPredicted RBP33.71■■■□□ 2.99
SSH1-207ENST00000547862 ARHGAP35Q9NRY4 1499 aa33.71■■■□□ 2.99
SSH1-207ENST00000547862 AKNAQ7Z591 1439 aa33.7■■■□□ 2.99
SSH1-207ENST00000547862 MADDQ8WXG6 1647 aa33.69■■■□□ 2.98
SSH1-207ENST00000547862 ARID4BQ4LE39 1312 aaPredicted RBP33.67■■■□□ 2.98
SSH1-207ENST00000547862 FMN1Q68DA7 1419 aa33.67■■■□□ 2.98
SSH1-207ENST00000547862 MYO5CQ9NQX4 1742 aa33.64■■■□□ 2.98
SSH1-207ENST00000547862 PTPRMP28827 1452 aa33.63■■■□□ 2.97
SSH1-207ENST00000547862 LRRIQ1Q96JM4 1722 aa33.62■■■□□ 2.97
SSH1-207ENST00000547862 RIMS1Q86UR5 1692 aaKnown RBP33.61■■■□□ 2.97
SSH1-207ENST00000547862 KIF14Q15058 1648 aa33.61■■■□□ 2.97
SSH1-207ENST00000547862 ZMYM4Q5VZL5 1548 aa33.59■■■□□ 2.97
SSH1-207ENST00000547862 ZFYVE16Q7Z3T8 1539 aa33.58■■■□□ 2.97
SSH1-207ENST00000547862 SIGLEC1Q9BZZ2 1709 aa33.55■■■□□ 2.96
SSH1-207ENST00000547862 ILDR1Q86SU0 546 aaPredicted RBP33.53■■■□□ 2.96
SSH1-207ENST00000547862 YEATS2Q9ULM3 1422 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms