RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 IGF1RP08069 1367 aa32.58■■■□□ 2.81
GCN1-203ENST00000547369 CUL7Q14999 1698 aa32.52■■■□□ 2.8
GCN1-203ENST00000547369 KIAA0586Q9BVV6 1533 aa32.46■■■□□ 2.79
GCN1-203ENST00000547369 CARMIL1Q5VZK9 1371 aa32.36■■■□□ 2.77
GCN1-203ENST00000547369 KIF13AQ9H1H9 1805 aa32.33■■■□□ 2.77
GCN1-203ENST00000547369 NPM1P06748 294 aaKnown RBP eCLIP32.28■■■□□ 2.76
GCN1-203ENST00000547369 ADCY10Q96PN6 1610 aa32.26■■■□□ 2.76
GCN1-203ENST00000547369 MAPKBP1O60336 1514 aa32.22■■■□□ 2.75
GCN1-203ENST00000547369 ABCC10Q5T3U5 1492 aa32.19■■■□□ 2.74
GCN1-203ENST00000547369 FAM69CQ0P6D2 419 aa32.16■■■□□ 2.74
GCN1-203ENST00000547369 PTPRGP23470 1445 aa32.15■■■□□ 2.74
GCN1-203ENST00000547369 IQGAP2Q13576 1575 aa32.15■■■□□ 2.74
GCN1-203ENST00000547369 CARMIL2Q6F5E8 1435 aa32.13■■■□□ 2.73
GCN1-203ENST00000547369 DIP2BQ9P265 1576 aa32.11■■■□□ 2.73
GCN1-203ENST00000547369 TNIKQ9UKE5 1360 aa32.09■■■□□ 2.73
GCN1-203ENST00000547369 AEBP2Q6ZN18 517 aaPredicted RBP32.08■■■□□ 2.73
GCN1-203ENST00000547369 TTBK1Q5TCY1 1321 aaPredicted RBP32.07■■■□□ 2.72
GCN1-203ENST00000547369 RAPGEF2Q9Y4G8 1499 aa32.07■■■□□ 2.72
GCN1-203ENST00000547369 DISP1Q96F81 1524 aa31.99■■■□□ 2.71
GCN1-203ENST00000547369 ABCC2Q92887 1545 aa31.97■■■□□ 2.71
GCN1-203ENST00000547369 UGGT2Q9NYU1 1516 aa31.95■■■□□ 2.7
GCN1-203ENST00000547369 UHRF1BP1LA0JNW5 1464 aa31.92■■■□□ 2.7
GCN1-203ENST00000547369 UACAQ9BZF9 1416 aa31.91■■■□□ 2.7
GCN1-203ENST00000547369 TSPOAP1O95153 1857 aa31.91■■■□□ 2.7
GCN1-203ENST00000547369 KIAA0556O60303 1618 aa31.86■■■□□ 2.69
GCN1-203ENST00000547369 ASXL2Q76L83 1435 aa31.85■■■□□ 2.69
GCN1-203ENST00000547369 PLB1Q6P1J6 1458 aa31.84■■■□□ 2.69
GCN1-203ENST00000547369 KDM6BO15054 1643 aa31.82■■■□□ 2.69
GCN1-203ENST00000547369 CTTNBP2Q8WZ74 1663 aa31.82■■■□□ 2.68
GCN1-203ENST00000547369 KDM5BQ9UGL1 1544 aa31.77■■■□□ 2.68
GCN1-203ENST00000547369 GLI2P10070 1586 aa31.77■■■□□ 2.68
GCN1-203ENST00000547369 PRXQ9BXM0 1461 aa31.75■■■□□ 2.67
GCN1-203ENST00000547369 ZCCHC11Q5TAX3 1644 aaKnown RBP31.71■■■□□ 2.67
GCN1-203ENST00000547369 GOLGA3Q08378 1498 aa31.69■■■□□ 2.66
GCN1-203ENST00000547369 PPRC1Q5VV67 1664 aaKnown RBP31.68■■■□□ 2.66
GCN1-203ENST00000547369 EPRSP07814 1512 aaKnown RBP31.66■■■□□ 2.66
GCN1-203ENST00000547369 MAP3K4Q9Y6R4 1608 aa31.6■■■□□ 2.65
GCN1-203ENST00000547369 ABCA8O94911 1581 aa31.56■■■□□ 2.64
GCN1-203ENST00000547369 WDR7Q9Y4E6 1490 aa31.55■■■□□ 2.64
GCN1-203ENST00000547369 CSRNP3Q8WYN3 585 aa31.52■■■□□ 2.64
GCN1-203ENST00000547369 TEX14Q8IWB6 1497 aa31.51■■■□□ 2.63
GCN1-203ENST00000547369 KDM4FA0A1W2PPD8 638 aa31.49■■■□□ 2.63
GCN1-203ENST00000547369 COL17A1Q9UMD9 1497 aaPredicted RBP31.46■■■□□ 2.63
GCN1-203ENST00000547369 P3H3Q8IVL6 736 aa31.42■■■□□ 2.62
GCN1-203ENST00000547369 FAM9AQ8IZU1 332 aaPredicted RBP31.41■■■□□ 2.62
GCN1-203ENST00000547369 EEA1Q15075 1411 aa31.4■■■□□ 2.62
GCN1-203ENST00000547369 KCNH8Q96L42 1107 aa31.39■■■□□ 2.62
GCN1-203ENST00000547369 CFAP43Q8NDM7 1665 aa31.37■■■□□ 2.61
GCN1-203ENST00000547369 CD109Q6YHK3 1445 aa31.36■■■□□ 2.61
GCN1-203ENST00000547369 SAMD9Q5K651 1589 aa31.35■■■□□ 2.61
GCN1-203ENST00000547369 MAGI3Q5TCQ9 1506 aa31.34■■■□□ 2.61
GCN1-203ENST00000547369 ATP10BO94823 1461 aa31.31■■■□□ 2.6
GCN1-203ENST00000547369 ARID3CA6NKF2 412 aa31.3■■■□□ 2.6
GCN1-203ENST00000547369 ADGRL1O94910 1474 aa31.25■■■□□ 2.59
GCN1-203ENST00000547369 RAPGEF6Q8TEU7 1601 aa31.24■■■□□ 2.59
GCN1-203ENST00000547369 RANGAP1P46060 587 aaPredicted RBP31.19■■■□□ 2.58
GCN1-203ENST00000547369 FHOD3Q2V2M9 1422 aa31.15■■■□□ 2.58
GCN1-203ENST00000547369 KIF21BO75037 1637 aa31.14■■■□□ 2.58
GCN1-203ENST00000547369 ABCA9Q8IUA7 1624 aa31.13■■■□□ 2.57
GCN1-203ENST00000547369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.12■■■□□ 2.57
GCN1-203ENST00000547369 HNRNPUL2Q1KMD3 747 aaKnown RBP31.12■■■□□ 2.57
GCN1-203ENST00000547369 NUP153P49790 1475 aaKnown RBP31.12■■■□□ 2.57
GCN1-203ENST00000547369 ARAP3Q8WWN8 1544 aa31.09■■■□□ 2.57
GCN1-203ENST00000547369 EFCAB5A4FU69 1503 aa31.05■■■□□ 2.56
GCN1-203ENST00000547369 PHLDB1Q86UU1 1377 aa31.04■■■□□ 2.56
GCN1-203ENST00000547369 NEO1Q92859 1461 aa30.97■■■□□ 2.55
GCN1-203ENST00000547369 PLEKHD1A6NEE1 506 aa30.96■■■□□ 2.55
GCN1-203ENST00000547369 CHIC1Q5VXU3 224 aa30.96■■■□□ 2.55
GCN1-203ENST00000547369 UBTFP17480 764 aaKnown RBP30.91■■■□□ 2.54
GCN1-203ENST00000547369 EHMT2Q96KQ7 1210 aa30.91■■■□□ 2.54
GCN1-203ENST00000547369 RAPGEF3O95398 923 aa30.9■■■□□ 2.54
GCN1-203ENST00000547369 FRMPD1Q5SYB0 1578 aa30.83■■■□□ 2.53
GCN1-203ENST00000547369 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.83■■■□□ 2.53
GCN1-203ENST00000547369 CDK13Q14004 1512 aaKnown RBP30.82■■■□□ 2.52
GCN1-203ENST00000547369 HECW2Q9P2P5 1572 aa30.8■■■□□ 2.52
GCN1-203ENST00000547369 ARHGAP35Q9NRY4 1499 aa30.78■■■□□ 2.52
GCN1-203ENST00000547369 FMN1Q68DA7 1419 aa30.78■■■□□ 2.52
GCN1-203ENST00000547369 TTC37Q6PGP7 1564 aa30.78■■■□□ 2.52
GCN1-203ENST00000547369 FANCAO15360 1455 aa30.77■■■□□ 2.52
GCN1-203ENST00000547369 AKNAQ7Z591 1439 aa30.77■■■□□ 2.52
GCN1-203ENST00000547369 CFAP74Q9C0B2 1584 aa30.76■■■□□ 2.52
GCN1-203ENST00000547369 DENND4BO75064 1496 aaPredicted RBP30.76■■■□□ 2.51
GCN1-203ENST00000547369 HECW1Q76N89 1606 aa30.73■■■□□ 2.51
GCN1-203ENST00000547369 ATP1B4Q9UN42 357 aaPredicted RBP30.73■■■□□ 2.51
GCN1-203ENST00000547369 RICTORQ6R327 1708 aa30.73■■■□□ 2.51
GCN1-203ENST00000547369 ADAMTSL3P82987 1691 aa30.71■■■□□ 2.51
GCN1-203ENST00000547369 ARHGEF40Q8TER5 1519 aa30.67■■■□□ 2.5
GCN1-203ENST00000547369 ARID4BQ4LE39 1312 aaPredicted RBP30.66■■■□□ 2.5
GCN1-203ENST00000547369 BCORL1Q5H9F3 1711 aa30.65■■■□□ 2.5
GCN1-203ENST00000547369 PLCH2O75038 1416 aa30.64■■■□□ 2.5
GCN1-203ENST00000547369 PTPRMP28827 1452 aa30.63■■■□□ 2.49
GCN1-203ENST00000547369 CDK11AQ9UQ88 783 aaPredicted RBP30.63■■■□□ 2.49
GCN1-203ENST00000547369 ZMYM4Q5VZL5 1548 aa30.61■■■□□ 2.49
GCN1-203ENST00000547369 MADDQ8WXG6 1647 aa30.58■■■□□ 2.49
GCN1-203ENST00000547369 MYO5CQ9NQX4 1742 aa30.57■■■□□ 2.48
GCN1-203ENST00000547369 SCAPERQ9BY12 1400 aa30.56■■■□□ 2.48
GCN1-203ENST00000547369 ZFYVE16Q7Z3T8 1539 aa30.55■■■□□ 2.48
GCN1-203ENST00000547369 TROQ12816 1431 aaPredicted RBP30.55■■■□□ 2.48
GCN1-203ENST00000547369 KIF14Q15058 1648 aa30.55■■■□□ 2.48
GCN1-203ENST00000547369 LRRIQ1Q96JM4 1722 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms