RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
NPAS3-205ENST00000547068 GOLGA3Q08378 1498 aa15.43■□□□□ 0.06
NPAS3-205ENST00000547068 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
NPAS3-205ENST00000547068 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.06
NPAS3-205ENST00000547068 ZNF608Q9ULD9 1512 aaPredicted RBP15.4■□□□□ 0.06
NPAS3-205ENST00000547068 BCANQ96GW7 911 aa15.39■□□□□ 0.05
NPAS3-205ENST00000547068 ABCA5Q8WWZ7 1642 aa15.37■□□□□ 0.05
NPAS3-205ENST00000547068 APLP2Q06481 763 aa15.35■□□□□ 0.05
NPAS3-205ENST00000547068 IGF1RP08069 1367 aa15.35■□□□□ 0.05
NPAS3-205ENST00000547068 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
NPAS3-205ENST00000547068 GRIN2BQ13224 1484 aa15.33■□□□□ 0.05
NPAS3-205ENST00000547068 RBM19Q9Y4C8 960 aaKnown RBP15.33■□□□□ 0.04
NPAS3-205ENST00000547068 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.04
NPAS3-205ENST00000547068 FKBP8Q14318 412 aa15.33■□□□□ 0.04
NPAS3-205ENST00000547068 ERICH3Q5RHP9 1530 aa15.32■□□□□ 0.04
NPAS3-205ENST00000547068 PBRM1Q86U86 1689 aa15.31■□□□□ 0.04
NPAS3-205ENST00000547068 CLIP1P30622 1438 aa15.3■□□□□ 0.04
NPAS3-205ENST00000547068 VPS8Q8N3P4 1428 aa15.3■□□□□ 0.04
NPAS3-205ENST00000547068 CARMIL1Q5VZK9 1371 aa15.29■□□□□ 0.04
NPAS3-205ENST00000547068 KCNH8Q96L42 1107 aa15.28■□□□□ 0.04
NPAS3-205ENST00000547068 CUL7Q14999 1698 aa15.27■□□□□ 0.03
NPAS3-205ENST00000547068 SNAPC4Q5SXM2 1469 aa15.25■□□□□ 0.03
NPAS3-205ENST00000547068 PRXQ9BXM0 1461 aa15.25■□□□□ 0.03
NPAS3-205ENST00000547068 MAGI1Q96QZ7 1491 aaPredicted RBP15.24■□□□□ 0.03
NPAS3-205ENST00000547068 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
NPAS3-205ENST00000547068 NEFLP07196 543 aa15.23■□□□□ 0.03
NPAS3-205ENST00000547068 RAPGEF2Q9Y4G8 1499 aa15.23■□□□□ 0.03
NPAS3-205ENST00000547068 KIF21BO75037 1637 aa15.23■□□□□ 0.03
NPAS3-205ENST00000547068 CHMP7Q8WUX9 453 aaPredicted RBP15.22■□□□□ 0.03
NPAS3-205ENST00000547068 FBLN2P98095 1184 aa15.22■□□□□ 0.03
NPAS3-205ENST00000547068 ADAMTS12P58397 1594 aa15.19■□□□□ 0.02
NPAS3-205ENST00000547068 SYNJ2O15056 1496 aa15.18■□□□□ 0.02
NPAS3-205ENST00000547068 MSH5O43196 834 aa15.17■□□□□ 0.02
NPAS3-205ENST00000547068 ITGAEP38570 1179 aa15.16■□□□□ 0.02
NPAS3-205ENST00000547068 RANGAP1P46060 587 aaPredicted RBP15.14■□□□□ 0.01
NPAS3-205ENST00000547068 GRIN2AQ12879 1464 aa15.13■□□□□ 0.01
NPAS3-205ENST00000547068 ERICH6Q7L0X2 663 aa15.1■□□□□ 0.01
NPAS3-205ENST00000547068 PRKCSHP14314 528 aaPredicted RBP15.09■□□□□ 0.01
NPAS3-205ENST00000547068 DDX10Q13206 875 aaKnown RBP15.09■□□□□ 0.01
NPAS3-205ENST00000547068 FANCIQ9NVI1 1328 aa15.09■□□□□ 0.01
NPAS3-205ENST00000547068 CHD1O14646 1710 aa15.08■□□□□ 0
NPAS3-205ENST00000547068 TRIM52Q96A61 297 aa15.06■□□□□ 0
NPAS3-205ENST00000547068 CTTNBP2Q8WZ74 1663 aa15.04■□□□□ -0
NPAS3-205ENST00000547068 KANK4Q5T7N3 995 aaPredicted RBP15.03■□□□□ -0
NPAS3-205ENST00000547068 RRBP1Q9P2E9 1410 aaKnown RBP15.03■□□□□ -0
NPAS3-205ENST00000547068 NUP160Q12769 1436 aa15.02■□□□□ -0
NPAS3-205ENST00000547068 OSCARQ8IYS5 282 aa15.02□□□□□ -0.01
NPAS3-205ENST00000547068 MYT1LQ9UL68 1186 aa15.02□□□□□ -0.01
NPAS3-205ENST00000547068 KIAA0586Q9BVV6 1533 aa15.02□□□□□ -0.01
NPAS3-205ENST00000547068 CEP170Q5SW79 1584 aa15.01□□□□□ -0.01
NPAS3-205ENST00000547068 CCER2I3L3R5 266 aa15.01□□□□□ -0.01
NPAS3-205ENST00000547068 CDK11AQ9UQ88 783 aaPredicted RBP15.01□□□□□ -0.01
NPAS3-205ENST00000547068 PPP1R15AO75807 674 aaPredicted RBP14.99□□□□□ -0.01
NPAS3-205ENST00000547068 IQGAP2Q13576 1575 aa14.98□□□□□ -0.01
NPAS3-205ENST00000547068 ANP32CO43423 234 aa14.97□□□□□ -0.01
NPAS3-205ENST00000547068 CCNB3Q8WWL7 1395 aa14.96□□□□□ -0.01
NPAS3-205ENST00000547068 JPH4Q96JJ6 628 aa14.96□□□□□ -0.01
NPAS3-205ENST00000547068 MAPKBP1O60336 1514 aa14.96□□□□□ -0.01
NPAS3-205ENST00000547068 DEKP35659 375 aaKnown RBP14.95□□□□□ -0.02
NPAS3-205ENST00000547068 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
NPAS3-205ENST00000547068 RAB3GAP2Q9H2M9 1393 aa14.94□□□□□ -0.02
NPAS3-205ENST00000547068 P3H3Q8IVL6 736 aa14.9□□□□□ -0.02
NPAS3-205ENST00000547068 UGGT2Q9NYU1 1516 aa14.9□□□□□ -0.02
NPAS3-205ENST00000547068 CLASP1Q7Z460 1538 aa14.89□□□□□ -0.03
NPAS3-205ENST00000547068 CARMIL2Q6F5E8 1435 aa14.89□□□□□ -0.03
NPAS3-205ENST00000547068 EFCAB5A4FU69 1503 aa14.89□□□□□ -0.03
NPAS3-205ENST00000547068 IRX6P78412 446 aaPredicted RBP14.88□□□□□ -0.03
NPAS3-205ENST00000547068 HIRIP3Q9BW71 556 aaPredicted RBP14.88□□□□□ -0.03
NPAS3-205ENST00000547068 SIN3AQ96ST3 1273 aa14.88□□□□□ -0.03
NPAS3-205ENST00000547068 ARHGAP35Q9NRY4 1499 aa14.87□□□□□ -0.03
NPAS3-205ENST00000547068 PRG4Q92954 1404 aaPredicted RBP14.86□□□□□ -0.03
NPAS3-205ENST00000547068 SAMD9Q5K651 1589 aa14.84□□□□□ -0.03
NPAS3-205ENST00000547068 SHROOM2Q13796 1616 aa14.84□□□□□ -0.03
NPAS3-205ENST00000547068 SETD5Q9C0A6 1442 aa14.84□□□□□ -0.03
NPAS3-205ENST00000547068 TIMELESSQ9UNS1 1208 aa14.84□□□□□ -0.03
NPAS3-205ENST00000547068 DISP1Q96F81 1524 aa14.83□□□□□ -0.04
NPAS3-205ENST00000547068 HNRNPUQ00839 825 aaKnown RBP eCLIP14.83□□□□□ -0.04
NPAS3-205ENST00000547068 FHOD3Q2V2M9 1422 aa14.82□□□□□ -0.04
NPAS3-205ENST00000547068 KIAA0556O60303 1618 aa14.82□□□□□ -0.04
NPAS3-205ENST00000547068 ERICH6BQ5W0A0 696 aa14.81□□□□□ -0.04
NPAS3-205ENST00000547068 PPP4R2Q9NY27 417 aa14.8□□□□□ -0.04
NPAS3-205ENST00000547068 FMN1Q68DA7 1419 aa14.78□□□□□ -0.04
NPAS3-205ENST00000547068 NBR1Q14596 966 aa14.77□□□□□ -0.05
NPAS3-205ENST00000547068 NOP58Q9Y2X3 529 aaKnown RBP14.77□□□□□ -0.05
NPAS3-205ENST00000547068 ANO8Q9HCE9 1232 aaPredicted RBP14.76□□□□□ -0.05
NPAS3-205ENST00000547068 PTPRGP23470 1445 aa14.76□□□□□ -0.05
NPAS3-205ENST00000547068 ATP1B4Q9UN42 357 aaPredicted RBP14.75□□□□□ -0.05
NPAS3-205ENST00000547068 ERCC6L2Q5T890 1561 aa14.74□□□□□ -0.05
NPAS3-205ENST00000547068 B4GALNT3Q6L9W6 998 aa14.7□□□□□ -0.06
NPAS3-205ENST00000547068 PAK3O75914 559 aaPredicted RBP14.69□□□□□ -0.06
NPAS3-205ENST00000547068 FAM50AQ14320 339 aaKnown RBP14.69□□□□□ -0.06
NPAS3-205ENST00000547068 ARHGEF11O15085 1522 aa14.69□□□□□ -0.06
NPAS3-205ENST00000547068 CASKIN1Q8WXD9 1431 aa14.68□□□□□ -0.06
NPAS3-205ENST00000547068 TONSLQ96HA7 1378 aa14.67□□□□□ -0.06
NPAS3-205ENST00000547068 TIAM1Q13009 1591 aa14.67□□□□□ -0.06
NPAS3-205ENST00000547068 FYCO1Q9BQS8 1478 aa14.66□□□□□ -0.06
NPAS3-205ENST00000547068 PCF11O94913 1555 aaKnown RBP14.65□□□□□ -0.06
NPAS3-205ENST00000547068 RTL5Q5HYW3 569 aaPredicted RBP14.65□□□□□ -0.06
NPAS3-205ENST00000547068 SALL2Q9Y467 1007 aaPredicted RBP14.65□□□□□ -0.06
NPAS3-205ENST00000547068 PLB1Q6P1J6 1458 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms