RNA–Protein interactions for RNA: ENST00000546918.1

TUBA1A-203, Transcript of tubulin alpha 1a, humanhuman

TSL 3 BASIC

Gene TUBA1A, Length 984 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-203ENST00000546918 KIAA0586Q9BVV6 1533 aa28.28■■■□□ 2.12
TUBA1A-203ENST00000546918 IQGAP2Q13576 1575 aa28.28■■■□□ 2.12
TUBA1A-203ENST00000546918 UBTFP17480 764 aaKnown RBP28.25■■■□□ 2.11
TUBA1A-203ENST00000546918 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
TUBA1A-203ENST00000546918 LOC105371045A0A1W2PR82 267 aa28.22■■■□□ 2.11
TUBA1A-203ENST00000546918 TNIKQ9UKE5 1360 aa28.21■■■□□ 2.11
TUBA1A-203ENST00000546918 SHROOM2Q13796 1616 aa28.18■■■□□ 2.1
TUBA1A-203ENST00000546918 UGGT2Q9NYU1 1516 aa28.12■■■□□ 2.09
TUBA1A-203ENST00000546918 SAMD9Q5K651 1589 aa28.04■■■□□ 2.08
TUBA1A-203ENST00000546918 EFCAB5A4FU69 1503 aa28.03■■■□□ 2.08
TUBA1A-203ENST00000546918 JPH4Q96JJ6 628 aa28.02■■■□□ 2.08
TUBA1A-203ENST00000546918 CEP162Q5TB80 1403 aa28.01■■■□□ 2.08
TUBA1A-203ENST00000546918 KIAA0556O60303 1618 aa28.01■■■□□ 2.07
TUBA1A-203ENST00000546918 DISP1Q96F81 1524 aa27.99■■■□□ 2.07
TUBA1A-203ENST00000546918 PRG4Q92954 1404 aaPredicted RBP27.99■■■□□ 2.07
TUBA1A-203ENST00000546918 CLIP1P30622 1438 aa27.97■■■□□ 2.07
TUBA1A-203ENST00000546918 RANGAP1P46060 587 aaPredicted RBP27.96■■■□□ 2.07
TUBA1A-203ENST00000546918 ERCC6L2Q5T890 1561 aa27.95■■■□□ 2.07
TUBA1A-203ENST00000546918 CARMIL2Q6F5E8 1435 aa27.95■■■□□ 2.07
TUBA1A-203ENST00000546918 ARHGAP35Q9NRY4 1499 aa27.94■■■□□ 2.06
TUBA1A-203ENST00000546918 ARHGEF11O15085 1522 aa27.89■■■□□ 2.06
TUBA1A-203ENST00000546918 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
TUBA1A-203ENST00000546918 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
TUBA1A-203ENST00000546918 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
TUBA1A-203ENST00000546918 FHOD3Q2V2M9 1422 aa27.84■■■□□ 2.05
TUBA1A-203ENST00000546918 ARAP1Q96P48 1450 aa27.83■■■□□ 2.04
TUBA1A-203ENST00000546918 P3H3Q8IVL6 736 aa27.79■■■□□ 2.04
TUBA1A-203ENST00000546918 PTPRGP23470 1445 aa27.71■■■□□ 2.03
TUBA1A-203ENST00000546918 FMN1Q68DA7 1419 aa27.71■■■□□ 2.03
TUBA1A-203ENST00000546918 DNAJC5Q9H3Z4 198 aa27.66■■■□□ 2.02
TUBA1A-203ENST00000546918 TTBK1Q5TCY1 1321 aaPredicted RBP27.65■■■□□ 2.02
TUBA1A-203ENST00000546918 VPS8Q8N3P4 1428 aa27.64■■■□□ 2.02
TUBA1A-203ENST00000546918 ABCA8O94911 1581 aa27.64■■■□□ 2.01
TUBA1A-203ENST00000546918 PCF11O94913 1555 aaKnown RBP27.64■■■□□ 2.01
TUBA1A-203ENST00000546918 RAPGEF6Q8TEU7 1601 aa27.63■■■□□ 2.01
TUBA1A-203ENST00000546918 PLB1Q6P1J6 1458 aa27.6■■■□□ 2.01
TUBA1A-203ENST00000546918 HECW1Q76N89 1606 aa27.58■■■□□ 2.01
TUBA1A-203ENST00000546918 UACAQ9BZF9 1416 aa27.58■■■□□ 2
TUBA1A-203ENST00000546918 FYCO1Q9BQS8 1478 aa27.57■■■□□ 2
TUBA1A-203ENST00000546918 ABCC2Q92887 1545 aa27.57■■■□□ 2
TUBA1A-203ENST00000546918 CASKIN1Q8WXD9 1431 aa27.57■■■□□ 2
TUBA1A-203ENST00000546918 ADCY10Q96PN6 1610 aa27.55■■■□□ 2
TUBA1A-203ENST00000546918 UHRF1BP1LA0JNW5 1464 aa27.54■■■□□ 2
TUBA1A-203ENST00000546918 NUP153P49790 1475 aaKnown RBP27.5■■□□□ 1.99
TUBA1A-203ENST00000546918 LRRIQ1Q96JM4 1722 aa27.49■■□□□ 1.99
TUBA1A-203ENST00000546918 CYB5RLQ6IPT4 315 aa27.47■■□□□ 1.99
TUBA1A-203ENST00000546918 CCDC18Q5T9S5 1454 aa27.42■■□□□ 1.98
TUBA1A-203ENST00000546918 EPRSP07814 1512 aaKnown RBP27.41■■□□□ 1.98
TUBA1A-203ENST00000546918 CFAP43Q8NDM7 1665 aa27.41■■□□□ 1.98
TUBA1A-203ENST00000546918 ZCCHC11Q5TAX3 1644 aaKnown RBP27.41■■□□□ 1.98
TUBA1A-203ENST00000546918 KDM5BQ9UGL1 1544 aa27.41■■□□□ 1.98
TUBA1A-203ENST00000546918 ATP1B4Q9UN42 357 aaPredicted RBP27.39■■□□□ 1.98
TUBA1A-203ENST00000546918 CDK13Q14004 1512 aaKnown RBP27.39■■□□□ 1.98
TUBA1A-203ENST00000546918 ATP10BO94823 1461 aa27.35■■□□□ 1.97
TUBA1A-203ENST00000546918 TIAM1Q13009 1591 aa27.35■■□□□ 1.97
TUBA1A-203ENST00000546918 MAP3K1Q13233 1512 aa27.32■■□□□ 1.96
TUBA1A-203ENST00000546918 ARID3CA6NKF2 412 aa27.31■■□□□ 1.96
TUBA1A-203ENST00000546918 NPM1P06748 294 aaKnown RBP eCLIP27.25■■□□□ 1.95
TUBA1A-203ENST00000546918 MAPKBP1O60336 1514 aa27.24■■□□□ 1.95
TUBA1A-203ENST00000546918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.23■■□□□ 1.95
TUBA1A-203ENST00000546918 APLP2Q06481 763 aa27.23■■□□□ 1.95
TUBA1A-203ENST00000546918 HNRNPUL2Q1KMD3 747 aaKnown RBP27.23■■□□□ 1.95
TUBA1A-203ENST00000546918 MAGI3Q5TCQ9 1506 aa27.21■■□□□ 1.95
TUBA1A-203ENST00000546918 EHBP1L1Q8N3D4 1523 aa27.2■■□□□ 1.94
TUBA1A-203ENST00000546918 ASXL2Q76L83 1435 aa27.18■■□□□ 1.94
TUBA1A-203ENST00000546918 LRRC9Q6ZRR7 1453 aa27.17■■□□□ 1.94
TUBA1A-203ENST00000546918 WDR7Q9Y4E6 1490 aa27.17■■□□□ 1.94
TUBA1A-203ENST00000546918 CDK11AQ9UQ88 783 aaPredicted RBP27.16■■□□□ 1.94
TUBA1A-203ENST00000546918 TROQ12816 1431 aaPredicted RBP27.16■■□□□ 1.94
TUBA1A-203ENST00000546918 MTUS2Q5JR59 1369 aa27.14■■□□□ 1.94
TUBA1A-203ENST00000546918 PLEKHD1A6NEE1 506 aa27.12■■□□□ 1.93
TUBA1A-203ENST00000546918 KIF14Q15058 1648 aa27.11■■□□□ 1.93
TUBA1A-203ENST00000546918 SUPT6HQ7KZ85 1726 aaKnown RBP27.09■■□□□ 1.93
TUBA1A-203ENST00000546918 KANK4Q5T7N3 995 aaPredicted RBP27.08■■□□□ 1.93
TUBA1A-203ENST00000546918 DIP2BQ9P265 1576 aa27.03■■□□□ 1.92
TUBA1A-203ENST00000546918 ABCA9Q8IUA7 1624 aa27■■□□□ 1.91
TUBA1A-203ENST00000546918 TTC37Q6PGP7 1564 aa27■■□□□ 1.91
TUBA1A-203ENST00000546918 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.99■■□□□ 1.91
TUBA1A-203ENST00000546918 NCOA2Q15596 1464 aa26.99■■□□□ 1.91
TUBA1A-203ENST00000546918 ABCC10Q5T3U5 1492 aa26.99■■□□□ 1.91
TUBA1A-203ENST00000546918 GLI2P10070 1586 aa26.98■■□□□ 1.91
TUBA1A-203ENST00000546918 KIF13AQ9H1H9 1805 aa26.96■■□□□ 1.91
TUBA1A-203ENST00000546918 KCNH8Q96L42 1107 aa26.96■■□□□ 1.91
TUBA1A-203ENST00000546918 PPARGC1BQ86YN6 1023 aaKnown RBP26.95■■□□□ 1.9
TUBA1A-203ENST00000546918 MYO5CQ9NQX4 1742 aa26.93■■□□□ 1.9
TUBA1A-203ENST00000546918 ITSN2Q9NZM3 1697 aa26.92■■□□□ 1.9
TUBA1A-203ENST00000546918 MAP3K4Q9Y6R4 1608 aa26.91■■□□□ 1.9
TUBA1A-203ENST00000546918 CDC42BPAQ5VT25 1732 aa26.91■■□□□ 1.9
TUBA1A-203ENST00000546918 PREX2Q70Z35 1606 aa26.9■■□□□ 1.9
TUBA1A-203ENST00000546918 CCNB3Q8WWL7 1395 aa26.86■■□□□ 1.89
TUBA1A-203ENST00000546918 PHLDB1Q86UU1 1377 aa26.84■■□□□ 1.89
TUBA1A-203ENST00000546918 MYOM3Q5VTT5 1437 aa26.83■■□□□ 1.89
TUBA1A-203ENST00000546918 CDC42BPBQ9Y5S2 1711 aa26.83■■□□□ 1.89
TUBA1A-203ENST00000546918 FAM69CQ0P6D2 419 aa26.83■■□□□ 1.89
TUBA1A-203ENST00000546918 ARAP3Q8WWN8 1544 aa26.83■■□□□ 1.89
TUBA1A-203ENST00000546918 GPATCH8Q9UKJ3 1502 aaKnown RBP26.83■■□□□ 1.89
TUBA1A-203ENST00000546918 CD109Q6YHK3 1445 aa26.81■■□□□ 1.88
TUBA1A-203ENST00000546918 PLCH2O75038 1416 aa26.79■■□□□ 1.88
TUBA1A-203ENST00000546918 ARHGAP5Q13017 1502 aa26.78■■□□□ 1.88
TUBA1A-203ENST00000546918 PPRC1Q5VV67 1664 aaKnown RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms