RNA–Protein interactions for RNA: ENST00000546918.1

TUBA1A-203, Transcript of tubulin alpha 1a, humanhuman

TSL 3 BASIC

Gene TUBA1A, Length 984 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-203ENST00000546918 NISCHQ9Y2I1 1504 aa41.11■■■■■ 4.17
TUBA1A-203ENST00000546918 CCDC180Q9P1Z9 1646 aa36.36■■■■□ 3.41
TUBA1A-203ENST00000546918 ABCC9O60706 1549 aa34.83■■■■□ 3.17
TUBA1A-203ENST00000546918 ZCCHC6Q5VYS8 1495 aaKnown RBP34.42■■■■□ 3.1
TUBA1A-203ENST00000546918 DCAF1Q9Y4B6 1507 aa34.07■■■■□ 3.04
TUBA1A-203ENST00000546918 MYO15BQ96JP2 1530 aa33.96■■■■□ 3.03
TUBA1A-203ENST00000546918 NACADO15069 1562 aa33.95■■■■□ 3.03
TUBA1A-203ENST00000546918 DCAF8L2P0C7V8 631 aa33.93■■■■□ 3.02
TUBA1A-203ENST00000546918 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
TUBA1A-203ENST00000546918 SCRIBQ14160 1630 aa33.18■■■□□ 2.9
TUBA1A-203ENST00000546918 UNC13AQ9UPW8 1703 aa33.15■■■□□ 2.9
TUBA1A-203ENST00000546918 SHROOM4Q9ULL8 1493 aa32.81■■■□□ 2.84
TUBA1A-203ENST00000546918 BICRAQ9NZM4 1560 aa32.79■■■□□ 2.84
TUBA1A-203ENST00000546918 PABPN1Q86U42 306 aaKnown RBP eCLIP32.58■■■□□ 2.81
TUBA1A-203ENST00000546918 CECR2Q9BXF3 1484 aa31.92■■■□□ 2.7
TUBA1A-203ENST00000546918 EIF4G1Q04637 1599 aaKnown RBP31.87■■■□□ 2.69
TUBA1A-203ENST00000546918 BAZ1AQ9NRL2 1556 aaPredicted RBP31.84■■■□□ 2.69
TUBA1A-203ENST00000546918 SMARCA4P51532 1647 aa31.81■■■□□ 2.68
TUBA1A-203ENST00000546918 MROH2BQ7Z745 1585 aa31.69■■■□□ 2.66
TUBA1A-203ENST00000546918 CC2D2AQ9P2K1 1620 aa31.58■■■□□ 2.65
TUBA1A-203ENST00000546918 RSF1Q96T23 1441 aaPredicted RBP31.53■■■□□ 2.64
TUBA1A-203ENST00000546918 PEG3Q9GZU2 1588 aa31.48■■■□□ 2.63
TUBA1A-203ENST00000546918 SMARCA2P51531 1590 aa31.44■■■□□ 2.62
TUBA1A-203ENST00000546918 WIZO95785 1651 aa31.41■■■□□ 2.62
TUBA1A-203ENST00000546918 ATAD2BQ9ULI0 1458 aa31.4■■■□□ 2.62
TUBA1A-203ENST00000546918 NCAPD3P42695 1498 aa31.27■■■□□ 2.6
TUBA1A-203ENST00000546918 DNAJC5BQ9UF47 199 aa31.27■■■□□ 2.6
TUBA1A-203ENST00000546918 HMGXB3Q12766 1538 aa31.26■■■□□ 2.59
TUBA1A-203ENST00000546918 BAZ1BQ9UIG0 1483 aaKnown RBP31.21■■■□□ 2.59
TUBA1A-203ENST00000546918 SUPT5HO00267 1087 aaKnown RBP31.15■■■□□ 2.58
TUBA1A-203ENST00000546918 TOP2AP11388 1531 aaKnown RBP31.14■■■□□ 2.57
TUBA1A-203ENST00000546918 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.51
TUBA1A-203ENST00000546918 LAMC3Q9Y6N6 1575 aa30.41■■■□□ 2.46
TUBA1A-203ENST00000546918 CADPSQ9ULU8 1353 aa30.38■■■□□ 2.45
TUBA1A-203ENST00000546918 CFTRP13569 1480 aa30.37■■■□□ 2.45
TUBA1A-203ENST00000546918 PRDM2Q13029 1718 aa30.34■■■□□ 2.45
TUBA1A-203ENST00000546918 NESP48681 1621 aa30.34■■■□□ 2.45
TUBA1A-203ENST00000546918 PDS5BQ9NTI5 1447 aa30.12■■■□□ 2.41
TUBA1A-203ENST00000546918 KIF21AQ7Z4S6 1674 aa30.09■■■□□ 2.41
TUBA1A-203ENST00000546918 FANCD2Q9BXW9 1451 aa30.07■■■□□ 2.4
TUBA1A-203ENST00000546918 CEP164Q9UPV0 1460 aa29.99■■■□□ 2.39
TUBA1A-203ENST00000546918 ERCC6Q03468 1493 aa29.98■■■□□ 2.39
TUBA1A-203ENST00000546918 ABCC8Q09428 1581 aa29.82■■■□□ 2.36
TUBA1A-203ENST00000546918 THOC2Q8NI27 1593 aaKnown RBP29.82■■■□□ 2.36
TUBA1A-203ENST00000546918 MRC2Q9UBG0 1479 aa29.81■■■□□ 2.36
TUBA1A-203ENST00000546918 URB2Q14146 1524 aaKnown RBP29.75■■■□□ 2.35
TUBA1A-203ENST00000546918 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
TUBA1A-203ENST00000546918 WRNQ14191 1432 aaPredicted RBP eCLIP29.73■■■□□ 2.35
TUBA1A-203ENST00000546918 WDR62O43379 1518 aa29.72■■■□□ 2.35
TUBA1A-203ENST00000546918 CUX1P39880 1505 aa29.71■■■□□ 2.35
TUBA1A-203ENST00000546918 TOPBP1Q92547 1522 aa29.68■■■□□ 2.34
TUBA1A-203ENST00000546918 SYNJ1O43426 1573 aa29.68■■■□□ 2.34
TUBA1A-203ENST00000546918 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
TUBA1A-203ENST00000546918 TOP2BQ02880 1626 aa29.65■■■□□ 2.34
TUBA1A-203ENST00000546918 FGD5Q6ZNL6 1462 aa29.5■■■□□ 2.31
TUBA1A-203ENST00000546918 POLA1P09884 1462 aaPredicted RBP29.47■■■□□ 2.31
TUBA1A-203ENST00000546918 CHIC1Q5VXU3 224 aa29.46■■■□□ 2.31
TUBA1A-203ENST00000546918 CUX2O14529 1486 aa29.44■■■□□ 2.3
TUBA1A-203ENST00000546918 TRIM41Q8WV44 630 aa29.39■■■□□ 2.3
TUBA1A-203ENST00000546918 TARBP1Q13395 1621 aaKnown RBP29.34■■■□□ 2.29
TUBA1A-203ENST00000546918 IFT140Q96RY7 1462 aa29.32■■■□□ 2.28
TUBA1A-203ENST00000546918 WDR97A6NE52 1622 aa29.31■■■□□ 2.28
TUBA1A-203ENST00000546918 RAD54L2Q9Y4B4 1467 aa29.3■■■□□ 2.28
TUBA1A-203ENST00000546918 SOGA1O94964 1423 aa29.3■■■□□ 2.28
TUBA1A-203ENST00000546918 ABCA10Q8WWZ4 1543 aa29.25■■■□□ 2.27
TUBA1A-203ENST00000546918 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
TUBA1A-203ENST00000546918 ZNF608Q9ULD9 1512 aaPredicted RBP29.12■■■□□ 2.25
TUBA1A-203ENST00000546918 EIF4G3O43432 1585 aaKnown RBP29.12■■■□□ 2.25
TUBA1A-203ENST00000546918 TDRD9Q8NDG6 1382 aaKnown RBP29.05■■■□□ 2.24
TUBA1A-203ENST00000546918 KIF27Q86VH2 1401 aa29.04■■■□□ 2.24
TUBA1A-203ENST00000546918 AQRO60306 1485 aaKnown RBP eCLIP29.02■■■□□ 2.24
TUBA1A-203ENST00000546918 PBRM1Q86U86 1689 aa29.02■■■□□ 2.24
TUBA1A-203ENST00000546918 GAPVD1Q14C86 1478 aa29.01■■■□□ 2.23
TUBA1A-203ENST00000546918 RUSC2Q8N2Y8 1516 aa28.97■■■□□ 2.23
TUBA1A-203ENST00000546918 EEA1Q15075 1411 aa28.95■■■□□ 2.23
TUBA1A-203ENST00000546918 GRIN2BQ13224 1484 aa28.93■■■□□ 2.22
TUBA1A-203ENST00000546918 ERICH3Q5RHP9 1530 aa28.92■■■□□ 2.22
TUBA1A-203ENST00000546918 CUL7Q14999 1698 aa28.83■■■□□ 2.21
TUBA1A-203ENST00000546918 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
TUBA1A-203ENST00000546918 ADAMTS12P58397 1594 aa28.8■■■□□ 2.2
TUBA1A-203ENST00000546918 MAGI1Q96QZ7 1491 aaPredicted RBP28.8■■■□□ 2.2
TUBA1A-203ENST00000546918 IGF1RP08069 1367 aa28.8■■■□□ 2.2
TUBA1A-203ENST00000546918 FAM9AQ8IZU1 332 aaPredicted RBP28.76■■■□□ 2.19
TUBA1A-203ENST00000546918 CSRNP3Q8WYN3 585 aa28.72■■■□□ 2.19
TUBA1A-203ENST00000546918 FHAD1B1AJZ9 1412 aa28.7■■■□□ 2.19
TUBA1A-203ENST00000546918 SYNJ2O15056 1496 aa28.67■■■□□ 2.18
TUBA1A-203ENST00000546918 PRXQ9BXM0 1461 aa28.66■■■□□ 2.18
TUBA1A-203ENST00000546918 CARMIL1Q5VZK9 1371 aa28.66■■■□□ 2.18
TUBA1A-203ENST00000546918 KIF21BO75037 1637 aa28.65■■■□□ 2.18
TUBA1A-203ENST00000546918 CHD1O14646 1710 aa28.64■■■□□ 2.18
TUBA1A-203ENST00000546918 RAPGEF2Q9Y4G8 1499 aa28.6■■■□□ 2.17
TUBA1A-203ENST00000546918 GRIN2AQ12879 1464 aa28.58■■■□□ 2.17
TUBA1A-203ENST00000546918 CHMP7Q8WUX9 453 aaPredicted RBP28.51■■■□□ 2.15
TUBA1A-203ENST00000546918 GOLGA3Q08378 1498 aa28.49■■■□□ 2.15
TUBA1A-203ENST00000546918 FBLN2P98095 1184 aa28.48■■■□□ 2.15
TUBA1A-203ENST00000546918 CEP170Q5SW79 1584 aa28.43■■■□□ 2.14
TUBA1A-203ENST00000546918 CTTNBP2Q8WZ74 1663 aa28.42■■■□□ 2.14
TUBA1A-203ENST00000546918 NUP160Q12769 1436 aa28.41■■■□□ 2.14
TUBA1A-203ENST00000546918 EHMT2Q96KQ7 1210 aa28.33■■■□□ 2.13
TUBA1A-203ENST00000546918 CLASP1Q7Z460 1538 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms